RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 MYOM1P52179 1685 aa17.84■□□□□ 0.45
SCARF1-209ENST00000576012 PLEKHF1Q96S99 279 aa17.84■□□□□ 0.45
SCARF1-209ENST00000576012 ARAP3Q8WWN8 1544 aa17.84■□□□□ 0.45
SCARF1-209ENST00000576012 ZNF445P59923 1031 aa17.83■□□□□ 0.45
SCARF1-209ENST00000576012 DCTN1Q14203 1278 aa17.83■□□□□ 0.45
SCARF1-209ENST00000576012 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
SCARF1-209ENST00000576012 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-209ENST00000576012 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.44
SCARF1-209ENST00000576012 RABEP1Q15276 862 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 DIAPH1O60610 1272 aaKnown RBP17.82■□□□□ 0.44
SCARF1-209ENST00000576012 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 PHACTR3Q96KR7 559 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 ZDHHC9Q9Y397 364 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 NOS1P29475 1434 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 IQSEC2Q5JU85 1478 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 NEK4P51957 841 aa17.82■□□□□ 0.44
SCARF1-209ENST00000576012 PLXNC1O60486 1568 aa17.81■□□□□ 0.44
SCARF1-209ENST00000576012 ZNF518AQ6AHZ1 1483 aa17.81■□□□□ 0.44
SCARF1-209ENST00000576012 KANK1Q14678 1352 aa17.81■□□□□ 0.44
SCARF1-209ENST00000576012 TTC12Q9H892 705 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-209ENST00000576012 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
SCARF1-209ENST00000576012 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 RAPGEF3O95398 923 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 SPDYE4A6NLX3 237 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 ST18O60284 1047 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
SCARF1-209ENST00000576012 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
SCARF1-209ENST00000576012 DUOX2Q9NRD8 1548 aa17.79■□□□□ 0.44
SCARF1-209ENST00000576012 UNC13BO14795 1591 aa17.79■□□□□ 0.44
SCARF1-209ENST00000576012 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
SCARF1-209ENST00000576012 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
SCARF1-209ENST00000576012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCARF1-209ENST00000576012 IQGAP3Q86VI3 1631 aa17.79■□□□□ 0.44
SCARF1-209ENST00000576012 ZNF500O60304 480 aaPredicted RBP17.78■□□□□ 0.44
SCARF1-209ENST00000576012 SDSP20132 328 aa17.78■□□□□ 0.44
SCARF1-209ENST00000576012 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
SCARF1-209ENST00000576012 LRSAM1Q6UWE0 723 aa17.78■□□□□ 0.44
SCARF1-209ENST00000576012 USP25Q9UHP3 1055 aa17.78■□□□□ 0.44
SCARF1-209ENST00000576012 CCDC39Q9UFE4 941 aa17.78■□□□□ 0.44
SCARF1-209ENST00000576012 VAMP4O75379 141 aa17.77■□□□□ 0.44
SCARF1-209ENST00000576012 EVC2Q86UK5 1308 aa17.77■□□□□ 0.44
SCARF1-209ENST00000576012 SASS6Q6UVJ0 657 aa17.77■□□□□ 0.43
SCARF1-209ENST00000576012 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.43
SCARF1-209ENST00000576012 ZFYVE16Q7Z3T8 1539 aa17.77■□□□□ 0.43
SCARF1-209ENST00000576012 UPF3BQ9BZI7 483 aaKnown RBP17.76■□□□□ 0.43
SCARF1-209ENST00000576012 GADD45BO75293 160 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-209ENST00000576012 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
SCARF1-209ENST00000576012 PDLIM2Q96JY6 352 aa17.76■□□□□ 0.43
SCARF1-209ENST00000576012 FAM69CQ0P6D2 419 aa17.76■□□□□ 0.43
SCARF1-209ENST00000576012 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-209ENST00000576012 CEP152O94986 1710 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 FYB1O15117 783 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 TTC22Q5TAA0 569 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
SCARF1-209ENST00000576012 ATP7AQ04656 1500 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 KIAA2012Q0VF49 1180 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 STAC3Q96MF2 364 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 MAP7D2Q96T17 732 aa17.75■□□□□ 0.43
SCARF1-209ENST00000576012 DYNC1I1O14576 645 aa17.74■□□□□ 0.43
SCARF1-209ENST00000576012 SLC4A10Q6U841 1118 aa17.74■□□□□ 0.43
SCARF1-209ENST00000576012 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
SCARF1-209ENST00000576012 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
SCARF1-209ENST00000576012 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
SCARF1-209ENST00000576012 CASC1Q6TDU7 716 aa17.73■□□□□ 0.43
SCARF1-209ENST00000576012 CYP2E1P05181 493 aaPredicted RBP17.72■□□□□ 0.43
SCARF1-209ENST00000576012 TMX3Q96JJ7 454 aa17.72■□□□□ 0.43
SCARF1-209ENST00000576012 SHPRHQ149N8 1683 aa17.72■□□□□ 0.43
SCARF1-209ENST00000576012 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
SCARF1-209ENST00000576012 RILPL2Q969X0 211 aa17.72■□□□□ 0.43
SCARF1-209ENST00000576012 SPC24Q8NBT2 197 aa17.71■□□□□ 0.43
SCARF1-209ENST00000576012 CHMP3Q9Y3E7 222 aa17.71■□□□□ 0.43
SCARF1-209ENST00000576012 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
SCARF1-209ENST00000576012 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
SCARF1-209ENST00000576012 HS1BP3Q53T59 392 aa17.7■□□□□ 0.42
SCARF1-209ENST00000576012 A0A1W2PP64 1363 aa17.7■□□□□ 0.42
SCARF1-209ENST00000576012 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
SCARF1-209ENST00000576012 MLECQ14165 292 aa17.7■□□□□ 0.42
SCARF1-209ENST00000576012 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
SCARF1-209ENST00000576012 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
SCARF1-209ENST00000576012 HCLS1P14317 486 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-209ENST00000576012 CABP1Q9NZU7 370 aa17.69■□□□□ 0.42
SCARF1-209ENST00000576012 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
SCARF1-209ENST00000576012 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
SCARF1-209ENST00000576012 SOX12O15370 315 aa17.69■□□□□ 0.42
SCARF1-209ENST00000576012 CWC22Q9HCG8 908 aaKnown RBP17.69■□□□□ 0.42
SCARF1-209ENST00000576012 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
SCARF1-209ENST00000576012 INO80Q9ULG1 1556 aaPredicted RBP17.68■□□□□ 0.42
SCARF1-209ENST00000576012 TERF1P54274 439 aa17.68■□□□□ 0.42
SCARF1-209ENST00000576012 MEIS3Q99687 375 aa17.68■□□□□ 0.42
SCARF1-209ENST00000576012 MIS18AQ9NYP9 233 aa17.68■□□□□ 0.42
SCARF1-209ENST00000576012 EXOC6BQ9Y2D4 811 aa17.68■□□□□ 0.42
SCARF1-209ENST00000576012 CCDC94Q9BW85 323 aaPredicted RBP17.67■□□□□ 0.42
SCARF1-209ENST00000576012 POGZQ7Z3K3 1410 aa17.67■□□□□ 0.42
SCARF1-209ENST00000576012 CFAP74Q9C0B2 1584 aa17.67■□□□□ 0.42
SCARF1-209ENST00000576012 TRPM2O94759 1503 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms