RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 MARCH10Q8NA82 808 aaPredicted RBP14.48□□□□□ -0.09
CALCOCO2-227ENST00000575560 PDGFDQ9GZP0 370 aaPredicted RBP14.48□□□□□ -0.09
CALCOCO2-227ENST00000575560 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
CALCOCO2-227ENST00000575560 SLIT3O75094 1523 aa14.47□□□□□ -0.09
CALCOCO2-227ENST00000575560 ZBTB7CA1YPR0 619 aa14.47□□□□□ -0.09
CALCOCO2-227ENST00000575560 CDCA7Q9BWT1 371 aaPredicted RBP14.47□□□□□ -0.09
CALCOCO2-227ENST00000575560 RGPD3A6NKT7 1758 aaPredicted RBP14.47□□□□□ -0.09
CALCOCO2-227ENST00000575560 RGPD4Q7Z3J3 1758 aa14.47□□□□□ -0.09
CALCOCO2-227ENST00000575560 SBF2Q86WG5 1849 aa14.46□□□□□ -0.09
CALCOCO2-227ENST00000575560 PTGER2P43116 358 aa14.46□□□□□ -0.09
CALCOCO2-227ENST00000575560 ARHGEF25Q86VW2 580 aa14.46□□□□□ -0.09
CALCOCO2-227ENST00000575560 LRRC37A3O60309 1634 aa14.45□□□□□ -0.1
CALCOCO2-227ENST00000575560 COL18A1P39060 1754 aa14.45□□□□□ -0.1
CALCOCO2-227ENST00000575560 MSH5O43196 834 aa14.44□□□□□ -0.1
CALCOCO2-227ENST00000575560 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
CALCOCO2-227ENST00000575560 CASZ1Q86V15 1759 aa14.44□□□□□ -0.1
CALCOCO2-227ENST00000575560 ZBTB7AO95365 584 aa14.43□□□□□ -0.1
CALCOCO2-227ENST00000575560 TXNRD1Q16881 649 aa14.43□□□□□ -0.1
CALCOCO2-227ENST00000575560 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
CALCOCO2-227ENST00000575560 CPSF1Q10570 1443 aaKnown RBP14.42□□□□□ -0.1
CALCOCO2-227ENST00000575560 SLC15A2Q16348 729 aa14.42□□□□□ -0.1
CALCOCO2-227ENST00000575560 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
CALCOCO2-227ENST00000575560 TTC21BQ7Z4L5 1316 aa14.41□□□□□ -0.1
CALCOCO2-227ENST00000575560 EXOC5O00471 708 aa14.41□□□□□ -0.1
CALCOCO2-227ENST00000575560 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
CALCOCO2-227ENST00000575560 PIK3C2AO00443 1686 aa14.41□□□□□ -0.1
CALCOCO2-227ENST00000575560 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
CALCOCO2-227ENST00000575560 SGIP1Q9BQI5 828 aa14.4□□□□□ -0.1
CALCOCO2-227ENST00000575560 SYT17Q9BSW7 474 aa14.4□□□□□ -0.1
CALCOCO2-227ENST00000575560 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
CALCOCO2-227ENST00000575560 ZNF784Q8NCA9 323 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-227ENST00000575560 FHDC1Q9C0D6 1143 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-227ENST00000575560 QRICH2Q9H0J4 1663 aa14.39□□□□□ -0.11
CALCOCO2-227ENST00000575560 CSB-PGBD3P0DP91 1061 aa14.38□□□□□ -0.11
CALCOCO2-227ENST00000575560 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
CALCOCO2-227ENST00000575560 TTC21AQ8NDW8 1320 aa14.38□□□□□ -0.11
CALCOCO2-227ENST00000575560 WNK3Q9BYP7 1800 aa14.36□□□□□ -0.11
CALCOCO2-227ENST00000575560 MYOM1P52179 1685 aa14.36□□□□□ -0.11
CALCOCO2-227ENST00000575560 CCDC7Q96M83 1385 aa14.36□□□□□ -0.11
CALCOCO2-227ENST00000575560 SOX12O15370 315 aa14.36□□□□□ -0.11
CALCOCO2-227ENST00000575560 L3MBTL2Q969R5 705 aa14.36□□□□□ -0.11
CALCOCO2-227ENST00000575560 NFAT5O94916 1531 aa14.35□□□□□ -0.11
CALCOCO2-227ENST00000575560 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
CALCOCO2-227ENST00000575560 RGPD5Q99666 1765 aa14.34□□□□□ -0.11
CALCOCO2-227ENST00000575560 TNS2Q63HR2 1409 aa14.34□□□□□ -0.11
CALCOCO2-227ENST00000575560 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
CALCOCO2-227ENST00000575560 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.11
CALCOCO2-227ENST00000575560 ACSBG1Q96GR2 724 aa14.33□□□□□ -0.12
CALCOCO2-227ENST00000575560 KTN1Q86UP2 1357 aaKnown RBP14.33□□□□□ -0.12
CALCOCO2-227ENST00000575560 ABCC6O95255 1503 aa14.32□□□□□ -0.12
CALCOCO2-227ENST00000575560 ARXQ96QS3 562 aa14.32□□□□□ -0.12
CALCOCO2-227ENST00000575560 ERBB3P21860 1342 aa14.32□□□□□ -0.12
CALCOCO2-227ENST00000575560 USP31Q70CQ4 1352 aa14.32□□□□□ -0.12
CALCOCO2-227ENST00000575560 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
CALCOCO2-227ENST00000575560 MAP3K5Q99683 1374 aa14.31□□□□□ -0.12
CALCOCO2-227ENST00000575560 IL2RBP14784 551 aa14.3□□□□□ -0.12
CALCOCO2-227ENST00000575560 NLRP2Q9NX02 1062 aa14.3□□□□□ -0.12
CALCOCO2-227ENST00000575560 NHSQ6T4R5 1651 aa14.3□□□□□ -0.12
CALCOCO2-227ENST00000575560 ZNF827Q17R98 1081 aa14.29□□□□□ -0.12
CALCOCO2-227ENST00000575560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.29□□□□□ -0.12
CALCOCO2-227ENST00000575560 PAPPAQ13219 1627 aa14.29□□□□□ -0.12
CALCOCO2-227ENST00000575560 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
CALCOCO2-227ENST00000575560 C1QTNF8P60827 252 aa14.28□□□□□ -0.12
CALCOCO2-227ENST00000575560 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
CALCOCO2-227ENST00000575560 SBNO2Q9Y2G9 1366 aa14.27□□□□□ -0.12
CALCOCO2-227ENST00000575560 NME9Q86XW9 330 aa14.27□□□□□ -0.13
CALCOCO2-227ENST00000575560 ANKRD24Q8TF21 1146 aa14.27□□□□□ -0.13
CALCOCO2-227ENST00000575560 SLC16A10Q8TF71 515 aa14.27□□□□□ -0.13
CALCOCO2-227ENST00000575560 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
CALCOCO2-227ENST00000575560 CD163L1Q9NR16 1453 aa14.25□□□□□ -0.13
CALCOCO2-227ENST00000575560 CEP350Q5VT06 3117 aa14.25□□□□□ -0.13
CALCOCO2-227ENST00000575560 SLC27A3Q5K4L6 730 aa14.25□□□□□ -0.13
CALCOCO2-227ENST00000575560 CHD4Q14839 1912 aa14.25□□□□□ -0.13
CALCOCO2-227ENST00000575560 MON2Q7Z3U7 1717 aa14.24□□□□□ -0.13
CALCOCO2-227ENST00000575560 SENP3-EIF4A1A0A087X0R7 540 aa14.24□□□□□ -0.13
CALCOCO2-227ENST00000575560 GPR162Q16538 588 aa14.24□□□□□ -0.13
CALCOCO2-227ENST00000575560 BTAF1O14981 1849 aa14.24□□□□□ -0.13
CALCOCO2-227ENST00000575560 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
CALCOCO2-227ENST00000575560 IP6K1Q92551 441 aa14.23□□□□□ -0.13
CALCOCO2-227ENST00000575560 SLC12A5Q9H2X9 1139 aa14.23□□□□□ -0.13
CALCOCO2-227ENST00000575560 PNPLA7Q6ZV29 1317 aa14.22□□□□□ -0.13
CALCOCO2-227ENST00000575560 HDGFL2Q7Z4V5 671 aaPredicted RBP14.22□□□□□ -0.13
CALCOCO2-227ENST00000575560 DDX54Q8TDD1 881 aaKnown RBP14.22□□□□□ -0.13
CALCOCO2-227ENST00000575560 NEUROD1Q13562 356 aa14.21□□□□□ -0.13
CALCOCO2-227ENST00000575560 TMC1Q8TDI8 760 aa14.21□□□□□ -0.13
CALCOCO2-227ENST00000575560 EDC4Q6P2E9 1401 aaKnown RBP14.21□□□□□ -0.13
CALCOCO2-227ENST00000575560 POLD1P28340 1107 aa14.2□□□□□ -0.14
CALCOCO2-227ENST00000575560 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
CALCOCO2-227ENST00000575560 KCNQ4P56696 695 aa14.2□□□□□ -0.14
CALCOCO2-227ENST00000575560 TFCP2L1Q9NZI6 479 aa14.2□□□□□ -0.14
CALCOCO2-227ENST00000575560 LTN1O94822 1766 aa14.19□□□□□ -0.14
CALCOCO2-227ENST00000575560 COL24A1Q17RW2 1714 aa14.19□□□□□ -0.14
CALCOCO2-227ENST00000575560 PUS7Q96PZ0 661 aaKnown RBP14.19□□□□□ -0.14
CALCOCO2-227ENST00000575560 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
CALCOCO2-227ENST00000575560 KAT6BQ8WYB5 2073 aa14.19□□□□□ -0.14
CALCOCO2-227ENST00000575560 NLGN2Q8NFZ4 835 aa14.18□□□□□ -0.14
CALCOCO2-227ENST00000575560 CARD11Q9BXL7 1154 aa14.18□□□□□ -0.14
CALCOCO2-227ENST00000575560 A0A1W2PP64 1363 aa14.18□□□□□ -0.14
CALCOCO2-227ENST00000575560 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
CALCOCO2-227ENST00000575560 QSER1Q2KHR3 1735 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms