RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ARHGEF25Q86VW2 580 aa14.88□□□□□ -0.03
LITAF-216ENST00000574848 EVA1CP58658 441 aa14.87□□□□□ -0.03
LITAF-216ENST00000574848 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
LITAF-216ENST00000574848 TCP11L2Q8N4U5 519 aa14.87□□□□□ -0.03
LITAF-216ENST00000574848 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
LITAF-216ENST00000574848 TERF2IPQ9NYB0 399 aa14.87□□□□□ -0.03
LITAF-216ENST00000574848 MYOM1P52179 1685 aa14.87□□□□□ -0.03
LITAF-216ENST00000574848 PEAK1Q9H792 1746 aa14.86□□□□□ -0.03
LITAF-216ENST00000574848 WDR17Q8IZU2 1322 aa14.86□□□□□ -0.03
LITAF-216ENST00000574848 ANKRD36BQ8N2N9 1353 aa14.85□□□□□ -0.03
LITAF-216ENST00000574848 TMC1Q8TDI8 760 aa14.85□□□□□ -0.03
LITAF-216ENST00000574848 NME9Q86XW9 330 aa14.84□□□□□ -0.03
LITAF-216ENST00000574848 AXIN2Q9Y2T1 843 aa14.84□□□□□ -0.03
LITAF-216ENST00000574848 SF3B2Q13435 895 aaKnown RBP14.83□□□□□ -0.04
LITAF-216ENST00000574848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
LITAF-216ENST00000574848 USP35Q9P2H5 1018 aa14.83□□□□□ -0.04
LITAF-216ENST00000574848 FAM208AQ9UK61 1670 aaKnown RBP14.83□□□□□ -0.04
LITAF-216ENST00000574848 TMF1P82094 1093 aa14.82□□□□□ -0.04
LITAF-216ENST00000574848 DEFB132Q7Z7B7 95 aa14.82□□□□□ -0.04
LITAF-216ENST00000574848 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
LITAF-216ENST00000574848 RREB1Q92766 1687 aa14.81□□□□□ -0.04
LITAF-216ENST00000574848 RGPD3A6NKT7 1758 aaPredicted RBP14.81□□□□□ -0.04
LITAF-216ENST00000574848 RGPD4Q7Z3J3 1758 aa14.81□□□□□ -0.04
LITAF-216ENST00000574848 FAM196AQ6ZSG2 479 aa14.81□□□□□ -0.04
LITAF-216ENST00000574848 KIF20BQ96Q89 1820 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 ZBTB7CA1YPR0 619 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 BAG6P46379 1132 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 CCDC7Q96M83 1385 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 OVOS2A0A0G2JMS6 1433 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 BCL9O00512 1426 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 SBF2Q86WG5 1849 aa14.8□□□□□ -0.04
LITAF-216ENST00000574848 ERBB3P21860 1342 aa14.79□□□□□ -0.04
LITAF-216ENST00000574848 CDCA8Q53HL2 280 aa14.79□□□□□ -0.04
LITAF-216ENST00000574848 TOM1L2Q6ZVM7 507 aa14.79□□□□□ -0.04
LITAF-216ENST00000574848 PARD3Q8TEW0 1356 aa14.79□□□□□ -0.04
LITAF-216ENST00000574848 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
LITAF-216ENST00000574848 CARD10Q9BWT7 1032 aa14.79□□□□□ -0.04
LITAF-216ENST00000574848 TNS2Q63HR2 1409 aa14.78□□□□□ -0.04
LITAF-216ENST00000574848 C11orf95C9JLR9 678 aaPredicted RBP14.78□□□□□ -0.04
LITAF-216ENST00000574848 SOX12O15370 315 aa14.78□□□□□ -0.04
LITAF-216ENST00000574848 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
LITAF-216ENST00000574848 NUP188Q5SRE5 1749 aa14.76□□□□□ -0.05
LITAF-216ENST00000574848 LRP5O75197 1615 aa14.76□□□□□ -0.05
LITAF-216ENST00000574848 RTL1A6NKG5 1358 aa14.75□□□□□ -0.05
LITAF-216ENST00000574848 TRIM37O94972 964 aa14.74□□□□□ -0.05
LITAF-216ENST00000574848 DDB1Q16531 1140 aa14.74□□□□□ -0.05
LITAF-216ENST00000574848 COG3Q96JB2 828 aa14.74□□□□□ -0.05
LITAF-216ENST00000574848 ANKRD26Q9UPS8 1709 aa14.74□□□□□ -0.05
LITAF-216ENST00000574848 CSB-PGBD3P0DP91 1061 aa14.73□□□□□ -0.05
LITAF-216ENST00000574848 EN1Q05925 392 aaPredicted RBP14.73□□□□□ -0.05
LITAF-216ENST00000574848 CAMKK2Q96RR4 588 aa14.73□□□□□ -0.05
LITAF-216ENST00000574848 SRCAPQ6ZRS2 3230 aa14.72□□□□□ -0.05
LITAF-216ENST00000574848 NHSQ6T4R5 1651 aa14.72□□□□□ -0.05
LITAF-216ENST00000574848 IP6K1Q92551 441 aa14.72□□□□□ -0.05
LITAF-216ENST00000574848 MAP3K19Q56UN5 1328 aa14.71□□□□□ -0.05
LITAF-216ENST00000574848 FYB1O15117 783 aa14.71□□□□□ -0.05
LITAF-216ENST00000574848 ANKRD24Q8TF21 1146 aa14.71□□□□□ -0.05
LITAF-216ENST00000574848 NSD3Q9BZ95 1437 aa14.7□□□□□ -0.06
LITAF-216ENST00000574848 ZNF316A6NFI3 1004 aaPredicted RBP14.7□□□□□ -0.06
LITAF-216ENST00000574848 MARCH10Q8NA82 808 aaPredicted RBP14.7□□□□□ -0.06
LITAF-216ENST00000574848 KIF24Q5T7B8 1368 aa14.7□□□□□ -0.06
LITAF-216ENST00000574848 APBA3O96018 575 aa14.69□□□□□ -0.06
LITAF-216ENST00000574848 HOXC9P31274 260 aa14.69□□□□□ -0.06
LITAF-216ENST00000574848 EZH2Q15910 746 aaKnown RBP14.69□□□□□ -0.06
LITAF-216ENST00000574848 SHANK3Q9BYB0 1731 aa14.69□□□□□ -0.06
LITAF-216ENST00000574848 RGPD2P0DJD1 1756 aa14.68□□□□□ -0.06
LITAF-216ENST00000574848 EIF4G2P78344 907 aaKnown RBP eCLIP14.68□□□□□ -0.06
LITAF-216ENST00000574848 CARD14Q9BXL6 1004 aa14.68□□□□□ -0.06
LITAF-216ENST00000574848 IL2RBP14784 551 aa14.67□□□□□ -0.06
LITAF-216ENST00000574848 GGNBP2Q9H3C7 697 aa14.67□□□□□ -0.06
LITAF-216ENST00000574848 NLRP2Q9NX02 1062 aa14.67□□□□□ -0.06
LITAF-216ENST00000574848 EXOC5O00471 708 aa14.66□□□□□ -0.06
LITAF-216ENST00000574848 BCL11BQ9C0K0 894 aaPredicted RBP14.66□□□□□ -0.06
LITAF-216ENST00000574848 INSRP06213 1382 aa14.65□□□□□ -0.06
LITAF-216ENST00000574848 FLT4P35916 1363 aa14.65□□□□□ -0.06
LITAF-216ENST00000574848 PLSCR1O15162 318 aa14.65□□□□□ -0.06
LITAF-216ENST00000574848 HSPA5P11021 654 aaKnown RBP14.65□□□□□ -0.06
LITAF-216ENST00000574848 AMPHP49418 695 aa14.64□□□□□ -0.07
LITAF-216ENST00000574848 MEGF6O75095 1541 aa14.64□□□□□ -0.07
LITAF-216ENST00000574848 NCAPD2Q15021 1401 aa14.64□□□□□ -0.07
LITAF-216ENST00000574848 SMG6Q86US8 1419 aaKnown RBP14.64□□□□□ -0.07
LITAF-216ENST00000574848 FBLN1P23142 703 aa14.63□□□□□ -0.07
LITAF-216ENST00000574848 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
LITAF-216ENST00000574848 BTAF1O14981 1849 aa14.63□□□□□ -0.07
LITAF-216ENST00000574848 CGNL1Q0VF96 1302 aa14.63□□□□□ -0.07
LITAF-216ENST00000574848 PSDA5PKW4 1024 aaPredicted RBP14.62□□□□□ -0.07
LITAF-216ENST00000574848 PAPPAQ13219 1627 aa14.62□□□□□ -0.07
LITAF-216ENST00000574848 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
LITAF-216ENST00000574848 R3HDM1Q15032 1099 aaKnown RBP14.61□□□□□ -0.07
LITAF-216ENST00000574848 PTF1AQ7RTS3 328 aa14.61□□□□□ -0.07
LITAF-216ENST00000574848 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
LITAF-216ENST00000574848 NSD2O96028 1365 aa14.6□□□□□ -0.07
LITAF-216ENST00000574848 CASZ1Q86V15 1759 aa14.6□□□□□ -0.07
LITAF-216ENST00000574848 LTV1Q96GA3 475 aaPredicted RBP14.6□□□□□ -0.07
LITAF-216ENST00000574848 MAP2P11137 1827 aaKnown RBP14.59□□□□□ -0.07
LITAF-216ENST00000574848 NBPF14Q5TI25 921 aa14.58□□□□□ -0.08
LITAF-216ENST00000574848 NBPF6Q5VWK0 638 aa14.58□□□□□ -0.08
LITAF-216ENST00000574848 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
LITAF-216ENST00000574848 NBPF4Q96M43 638 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms