RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TERF2IPQ9NYB0 399 aa15.93■□□□□ 0.14
RPAIN-214ENST00000574003 EDC4Q6P2E9 1401 aaKnown RBP15.93■□□□□ 0.14
RPAIN-214ENST00000574003 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
RPAIN-214ENST00000574003 FBLN1P23142 703 aa15.92■□□□□ 0.14
RPAIN-214ENST00000574003 BAG6P46379 1132 aa15.92■□□□□ 0.14
RPAIN-214ENST00000574003 WDR17Q8IZU2 1322 aa15.92■□□□□ 0.14
RPAIN-214ENST00000574003 RGPD1P0DJD0 1748 aa15.91■□□□□ 0.14
RPAIN-214ENST00000574003 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
RPAIN-214ENST00000574003 FAM196AQ6ZSG2 479 aa15.91■□□□□ 0.14
RPAIN-214ENST00000574003 PUS7Q96PZ0 661 aaKnown RBP15.91■□□□□ 0.14
RPAIN-214ENST00000574003 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
RPAIN-214ENST00000574003 SRCAPQ6ZRS2 3230 aa15.9■□□□□ 0.14
RPAIN-214ENST00000574003 PSDA5PKW4 1024 aaPredicted RBP15.9■□□□□ 0.14
RPAIN-214ENST00000574003 EZH2Q15910 746 aaKnown RBP15.9■□□□□ 0.14
RPAIN-214ENST00000574003 USP54Q70EL1 1684 aa15.89■□□□□ 0.13
RPAIN-214ENST00000574003 PARP4Q9UKK3 1724 aaKnown RBP15.89■□□□□ 0.13
RPAIN-214ENST00000574003 TMF1P82094 1093 aa15.89■□□□□ 0.13
RPAIN-214ENST00000574003 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
RPAIN-214ENST00000574003 LTN1O94822 1766 aa15.89■□□□□ 0.13
RPAIN-214ENST00000574003 OVOS2A0A0J9YW53 1432 aa15.88■□□□□ 0.13
RPAIN-214ENST00000574003 OVOS2Q6IE36 1432 aa15.88■□□□□ 0.13
RPAIN-214ENST00000574003 LRRC37A3O60309 1634 aa15.88■□□□□ 0.13
RPAIN-214ENST00000574003 APBA3O96018 575 aa15.88■□□□□ 0.13
RPAIN-214ENST00000574003 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
RPAIN-214ENST00000574003 PTF1AQ7RTS3 328 aa15.87■□□□□ 0.13
RPAIN-214ENST00000574003 CARD10Q9BWT7 1032 aa15.87■□□□□ 0.13
RPAIN-214ENST00000574003 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
RPAIN-214ENST00000574003 DDB1Q16531 1140 aa15.86■□□□□ 0.13
RPAIN-214ENST00000574003 CAMKK2Q96RR4 588 aa15.86■□□□□ 0.13
RPAIN-214ENST00000574003 ANKRD36BQ8N2N9 1353 aa15.86■□□□□ 0.13
RPAIN-214ENST00000574003 NINLQ9Y2I6 1382 aa15.86■□□□□ 0.13
RPAIN-214ENST00000574003 MARCH10Q8NA82 808 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-214ENST00000574003 ANKRD24Q8TF21 1146 aa15.85■□□□□ 0.13
RPAIN-214ENST00000574003 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
RPAIN-214ENST00000574003 NLRP2Q9NX02 1062 aa15.85■□□□□ 0.13
RPAIN-214ENST00000574003 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
RPAIN-214ENST00000574003 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
RPAIN-214ENST00000574003 GGNBP2Q9H3C7 697 aa15.84■□□□□ 0.13
RPAIN-214ENST00000574003 PEAK1Q9H792 1746 aa15.84■□□□□ 0.13
RPAIN-214ENST00000574003 ERBB3P21860 1342 aa15.84■□□□□ 0.13
RPAIN-214ENST00000574003 COG3Q96JB2 828 aa15.83■□□□□ 0.12
RPAIN-214ENST00000574003 FYB1O15117 783 aa15.82■□□□□ 0.12
RPAIN-214ENST00000574003 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
RPAIN-214ENST00000574003 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
RPAIN-214ENST00000574003 CARD14Q9BXL6 1004 aa15.82■□□□□ 0.12
RPAIN-214ENST00000574003 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
RPAIN-214ENST00000574003 OVOS2A0A0G2JMS6 1433 aa15.81■□□□□ 0.12
RPAIN-214ENST00000574003 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
RPAIN-214ENST00000574003 ABCC6O95255 1503 aa15.81■□□□□ 0.12
RPAIN-214ENST00000574003 MYOM1P52179 1685 aa15.81■□□□□ 0.12
RPAIN-214ENST00000574003 RRS1Q15050 365 aaKnown RBP15.81■□□□□ 0.12
RPAIN-214ENST00000574003 SBF2Q86WG5 1849 aa15.81■□□□□ 0.12
RPAIN-214ENST00000574003 CCDC7Q96M83 1385 aa15.8■□□□□ 0.12
RPAIN-214ENST00000574003 EXOC5O00471 708 aa15.8■□□□□ 0.12
RPAIN-214ENST00000574003 IP6K1Q92551 441 aa15.8■□□□□ 0.12
RPAIN-214ENST00000574003 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
RPAIN-214ENST00000574003 CDCA7Q9BWT1 371 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-214ENST00000574003 RGPD2P0DJD1 1756 aa15.78■□□□□ 0.12
RPAIN-214ENST00000574003 HOXC9P31274 260 aa15.78■□□□□ 0.12
RPAIN-214ENST00000574003 AMPHP49418 695 aa15.78■□□□□ 0.12
RPAIN-214ENST00000574003 CDCA8Q53HL2 280 aa15.78■□□□□ 0.12
RPAIN-214ENST00000574003 NSD3Q9BZ95 1437 aa15.77■□□□□ 0.12
RPAIN-214ENST00000574003 KCNQ2O43526 872 aa15.77■□□□□ 0.12
RPAIN-214ENST00000574003 KAT6BQ8WYB5 2073 aa15.77■□□□□ 0.11
RPAIN-214ENST00000574003 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.11
RPAIN-214ENST00000574003 TNS2Q63HR2 1409 aa15.77■□□□□ 0.11
RPAIN-214ENST00000574003 RREB1Q92766 1687 aa15.76■□□□□ 0.11
RPAIN-214ENST00000574003 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
RPAIN-214ENST00000574003 IL2RBP14784 551 aa15.76■□□□□ 0.11
RPAIN-214ENST00000574003 ACSBG1Q96GR2 724 aa15.76■□□□□ 0.11
RPAIN-214ENST00000574003 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-214ENST00000574003 USHBP1Q8N6Y0 703 aa15.74■□□□□ 0.11
RPAIN-214ENST00000574003 EIF4G2P78344 907 aaKnown RBP eCLIP15.73■□□□□ 0.11
RPAIN-214ENST00000574003 PARD3Q8TEW0 1356 aa15.73■□□□□ 0.11
RPAIN-214ENST00000574003 C11orf95C9JLR9 678 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-214ENST00000574003 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
RPAIN-214ENST00000574003 PROM2Q8N271 834 aa15.72■□□□□ 0.11
RPAIN-214ENST00000574003 EMILIN1Q9Y6C2 1016 aa15.72■□□□□ 0.11
RPAIN-214ENST00000574003 BCL9O00512 1426 aa15.71■□□□□ 0.11
RPAIN-214ENST00000574003 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
RPAIN-214ENST00000574003 NBPF6Q5VWK0 638 aa15.71■□□□□ 0.11
RPAIN-214ENST00000574003 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
RPAIN-214ENST00000574003 NBPF4Q96M43 638 aa15.71■□□□□ 0.11
RPAIN-214ENST00000574003 ANO8Q9HCE9 1232 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-214ENST00000574003 MEGF6O75095 1541 aa15.69■□□□□ 0.1
RPAIN-214ENST00000574003 PLSCR1O15162 318 aa15.69■□□□□ 0.1
RPAIN-214ENST00000574003 NBPF14Q5TI25 921 aa15.69■□□□□ 0.1
RPAIN-214ENST00000574003 RTL1A6NKG5 1358 aa15.69■□□□□ 0.1
RPAIN-214ENST00000574003 LRP5O75197 1615 aa15.68■□□□□ 0.1
RPAIN-214ENST00000574003 PPM1GO15355 546 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-214ENST00000574003 PANK3Q9H999 370 aa15.68■□□□□ 0.1
RPAIN-214ENST00000574003 NHSQ6T4R5 1651 aa15.67■□□□□ 0.1
RPAIN-214ENST00000574003 TNNT2P45379 298 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-214ENST00000574003 TXNRD1Q16881 649 aa15.67■□□□□ 0.1
RPAIN-214ENST00000574003 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-214ENST00000574003 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-214ENST00000574003 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
RPAIN-214ENST00000574003 CGNL1Q0VF96 1302 aa15.66■□□□□ 0.1
RPAIN-214ENST00000574003 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
RPAIN-214ENST00000574003 INSRP06213 1382 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms