RNA–Protein interactions for RNA: ENST00000572882.2

ABCC1-204, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 4,565 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-204ENST00000572882 NUP160Q12769 1436 aa11.93□□□□□ -0.5
ABCC1-204ENST00000572882 UBAP1LF5GYI3 381 aa11.93□□□□□ -0.5
ABCC1-204ENST00000572882 CEBPAP49715 358 aaPredicted RBP11.93□□□□□ -0.5
ABCC1-204ENST00000572882 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
ABCC1-204ENST00000572882 ACBD3Q9H3P7 528 aa11.93□□□□□ -0.5
ABCC1-204ENST00000572882 VPS37DQ86XT2 251 aa11.92□□□□□ -0.5
ABCC1-204ENST00000572882 SPG7Q9UQ90 795 aa11.92□□□□□ -0.5
ABCC1-204ENST00000572882 LRRCC1Q9C099 1032 aa11.91□□□□□ -0.5
ABCC1-204ENST00000572882 TOM1O60784 492 aa11.91□□□□□ -0.5
ABCC1-204ENST00000572882 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
ABCC1-204ENST00000572882 ZNF530Q6P9A1 599 aaPredicted RBP11.91□□□□□ -0.5
ABCC1-204ENST00000572882 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
ABCC1-204ENST00000572882 NEUROD6Q96NK8 337 aa11.91□□□□□ -0.5
ABCC1-204ENST00000572882 FSD1Q9BTV5 496 aa11.91□□□□□ -0.5
ABCC1-204ENST00000572882 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
ABCC1-204ENST00000572882 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
ABCC1-204ENST00000572882 RNF214Q8ND24 703 aa11.91□□□□□ -0.5
ABCC1-204ENST00000572882 PUS7Q96PZ0 661 aaKnown RBP11.91□□□□□ -0.5
ABCC1-204ENST00000572882 DENND4BO75064 1496 aaPredicted RBP11.91□□□□□ -0.5
ABCC1-204ENST00000572882 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
ABCC1-204ENST00000572882 CHD1LQ86WJ1 897 aa11.9□□□□□ -0.5
ABCC1-204ENST00000572882 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
ABCC1-204ENST00000572882 NUTM2GQ5VZR2 741 aa11.9□□□□□ -0.5
ABCC1-204ENST00000572882 TBC1D2BQ9UPU7 963 aa11.9□□□□□ -0.5
ABCC1-204ENST00000572882 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
ABCC1-204ENST00000572882 NEK4P51957 841 aa11.9□□□□□ -0.5
ABCC1-204ENST00000572882 ITSN2Q9NZM3 1697 aa11.9□□□□□ -0.5
ABCC1-204ENST00000572882 RAPGEF6Q8TEU7 1601 aa11.9□□□□□ -0.51
ABCC1-204ENST00000572882 ANKRD1Q15327 319 aa11.89□□□□□ -0.51
ABCC1-204ENST00000572882 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
ABCC1-204ENST00000572882 FANCAO15360 1455 aa11.89□□□□□ -0.51
ABCC1-204ENST00000572882 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
ABCC1-204ENST00000572882 XBP1P17861 261 aa11.89□□□□□ -0.51
ABCC1-204ENST00000572882 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
ABCC1-204ENST00000572882 HMGB2P26583 209 aaKnown RBP11.88□□□□□ -0.51
ABCC1-204ENST00000572882 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
ABCC1-204ENST00000572882 PLCH2O75038 1416 aa11.88□□□□□ -0.51
ABCC1-204ENST00000572882 CCDC66A2RUB6 948 aa11.88□□□□□ -0.51
ABCC1-204ENST00000572882 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
ABCC1-204ENST00000572882 TSPY26PQ9H489 355 aa11.88□□□□□ -0.51
ABCC1-204ENST00000572882 TCOF1Q13428 1488 aaKnown RBP11.88□□□□□ -0.51
ABCC1-204ENST00000572882 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 IL16Q14005 1332 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 IDI1Q13907 227 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 RALGAPBQ86X10 1494 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 DUOX2Q9NRD8 1548 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
ABCC1-204ENST00000572882 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 ATP10BO94823 1461 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 DHX8Q14562 1220 aaKnown RBP11.87□□□□□ -0.51
ABCC1-204ENST00000572882 AEBP1Q8IUX7 1158 aa11.87□□□□□ -0.51
ABCC1-204ENST00000572882 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
ABCC1-204ENST00000572882 TRIM5Q9C035 493 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
ABCC1-204ENST00000572882 CDR1P51861 262 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 BRMS1Q9HCU9 246 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 PDE4CQ08493 712 aa11.86□□□□□ -0.51
ABCC1-204ENST00000572882 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
ABCC1-204ENST00000572882 AMOTQ4VCS5 1084 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 AK7Q96M32 723 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 RUFY1Q96T51 708 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 K7ELQ4 463 aaPredicted RBP11.85□□□□□ -0.51
ABCC1-204ENST00000572882 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 CWC15Q9P013 229 aaKnown RBP11.85□□□□□ -0.51
ABCC1-204ENST00000572882 CYP46A1Q9Y6A2 500 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 TTC21BQ7Z4L5 1316 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
ABCC1-204ENST00000572882 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 LRPPRCP42704 1394 aaKnown RBP11.85□□□□□ -0.51
ABCC1-204ENST00000572882 ANKRD36BQ8N2N9 1353 aa11.85□□□□□ -0.51
ABCC1-204ENST00000572882 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
ABCC1-204ENST00000572882 MCM4P33991 863 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 CABP4P57796 275 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 RBM33Q96EV2 1170 aaKnown RBP11.84□□□□□ -0.51
ABCC1-204ENST00000572882 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.84□□□□□ -0.516e-7■■■■□ 19.8
ABCC1-204ENST00000572882 KDM5BQ9UGL1 1544 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
ABCC1-204ENST00000572882 ESPNB1AK53 854 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
ABCC1-204ENST00000572882 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 CCP110O43303 1012 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 KRT32Q14532 448 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 ERCC4Q92889 916 aaPredicted RBP11.84□□□□□ -0.51
ABCC1-204ENST00000572882 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
ABCC1-204ENST00000572882 KINO60870 393 aaKnown RBP11.83□□□□□ -0.52
ABCC1-204ENST00000572882 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
ABCC1-204ENST00000572882 ZNF396Q96N95 335 aaPredicted RBP11.83□□□□□ -0.52
ABCC1-204ENST00000572882 CTTNBP2Q8WZ74 1663 aa11.83□□□□□ -0.52
ABCC1-204ENST00000572882 RRP9O43818 475 aaKnown RBP11.83□□□□□ -0.52
ABCC1-204ENST00000572882 VPS53Q5VIR6 699 aa11.83□□□□□ -0.52
ABCC1-204ENST00000572882 TMEM57Q8N5G2 664 aa11.83□□□□□ -0.52
ABCC1-204ENST00000572882 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
ABCC1-204ENST00000572882 GNL3LQ9NVN8 582 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms