RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 ZBTB7CA1YPR0 619 aa30.1■■■□□ 2.41
RAB40B-207ENST00000572603 BTG4Q9NY30 223 aa30.09■■■□□ 2.41
RAB40B-207ENST00000572603 ATRNO75882 1429 aa30.08■■■□□ 2.41
RAB40B-207ENST00000572603 AXIN2Q9Y2T1 843 aa30.08■■■□□ 2.41
RAB40B-207ENST00000572603 BLMP54132 1417 aaPredicted RBP30.07■■■□□ 2.4
RAB40B-207ENST00000572603 KIF24Q5T7B8 1368 aa30.07■■■□□ 2.4
RAB40B-207ENST00000572603 PARD3Q8TEW0 1356 aa30.07■■■□□ 2.4
RAB40B-207ENST00000572603 TNNT2P45379 298 aaPredicted RBP30.07■■■□□ 2.4
RAB40B-207ENST00000572603 USP21Q9UK80 565 aa30.07■■■□□ 2.4
RAB40B-207ENST00000572603 EMILIN1Q9Y6C2 1016 aa30.07■■■□□ 2.4
RAB40B-207ENST00000572603 FAM208AQ9UK61 1670 aaKnown RBP30.06■■■□□ 2.4
RAB40B-207ENST00000572603 CNGB1Q14028 1251 aaPredicted RBP30.05■■■□□ 2.4
RAB40B-207ENST00000572603 UNC5CLQ8IV45 518 aa30.05■■■□□ 2.4
RAB40B-207ENST00000572603 PHF23Q9BUL5 403 aaPredicted RBP30.05■■■□□ 2.4
RAB40B-207ENST00000572603 POLKQ9UBT6 870 aa30.05■■■□□ 2.4
RAB40B-207ENST00000572603 GLI3P10071 1580 aa30.04■■■□□ 2.4
RAB40B-207ENST00000572603 IP6K1Q92551 441 aa30.04■■■□□ 2.4
RAB40B-207ENST00000572603 CDK12Q9NYV4 1490 aaPredicted RBP30.04■■■□□ 2.4
RAB40B-207ENST00000572603 FLT4P35916 1363 aa30.03■■■□□ 2.4
RAB40B-207ENST00000572603 HOXC9P31274 260 aa30.03■■■□□ 2.4
RAB40B-207ENST00000572603 RGPD2P0DJD1 1756 aa30.03■■■□□ 2.4
RAB40B-207ENST00000572603 ZNF772Q68DY9 489 aaPredicted RBP30.02■■■□□ 2.4
RAB40B-207ENST00000572603 WNK3Q9BYP7 1800 aa30.01■■■□□ 2.39
RAB40B-207ENST00000572603 AMPHP49418 695 aa30■■■□□ 2.39
RAB40B-207ENST00000572603 INSRP06213 1382 aa29.99■■■□□ 2.39
RAB40B-207ENST00000572603 ERBB3P21860 1342 aa29.98■■■□□ 2.39
RAB40B-207ENST00000572603 POTEAQ6S8J7 498 aa29.98■■■□□ 2.39
RAB40B-207ENST00000572603 VPS72Q15906 364 aa29.97■■■□□ 2.39
RAB40B-207ENST00000572603 STRN4Q9NRL3 753 aa29.97■■■□□ 2.39
RAB40B-207ENST00000572603 TRPC5Q9UL62 973 aaPredicted RBP29.96■■■□□ 2.39
RAB40B-207ENST00000572603 WDR17Q8IZU2 1322 aa29.96■■■□□ 2.39
RAB40B-207ENST00000572603 COL3A1P02461 1466 aaPredicted RBP29.95■■■□□ 2.39
RAB40B-207ENST00000572603 HSP90AB2PQ58FF8 381 aa29.95■■■□□ 2.39
RAB40B-207ENST00000572603 CRB1P82279 1406 aa29.95■■■□□ 2.38
RAB40B-207ENST00000572603 LARP1Q6PKG0 1096 aaKnown RBP29.94■■■□□ 2.38
RAB40B-207ENST00000572603 ANKRD24Q8TF21 1146 aa29.94■■■□□ 2.38
RAB40B-207ENST00000572603 QTRT2Q9H974 415 aaKnown RBP29.93■■■□□ 2.38
RAB40B-207ENST00000572603 SPATA31A5Q5VU36 1347 aa29.93■■■□□ 2.38
RAB40B-207ENST00000572603 SPATA31A7Q8IWB4 1347 aa29.93■■■□□ 2.38
RAB40B-207ENST00000572603 PPM1GO15355 546 aaPredicted RBP29.92■■■□□ 2.38
RAB40B-207ENST00000572603 RGPD1P0DJD0 1748 aa29.92■■■□□ 2.38
RAB40B-207ENST00000572603 PPP2R1AP30153 589 aa29.92■■■□□ 2.38
RAB40B-207ENST00000572603 MTHFSP49914 203 aa29.9■■■□□ 2.38
RAB40B-207ENST00000572603 EVA1CP58658 441 aa29.9■■■□□ 2.38
RAB40B-207ENST00000572603 RALBP1Q15311 655 aa29.9■■■□□ 2.38
RAB40B-207ENST00000572603 THSD7AQ9UPZ6 1657 aa29.9■■■□□ 2.38
RAB40B-207ENST00000572603 SPATA31A1Q5TZJ5 1347 aa29.9■■■□□ 2.38
RAB40B-207ENST00000572603 LTV1Q96GA3 475 aaPredicted RBP29.88■■■□□ 2.37
RAB40B-207ENST00000572603 GJD4Q96KN9 370 aaPredicted RBP29.88■■■□□ 2.37
RAB40B-207ENST00000572603 PRKRIP1Q9H875 184 aaPredicted RBP29.88■■■□□ 2.37
RAB40B-207ENST00000572603 NCAPD2Q15021 1401 aa29.87■■■□□ 2.37
RAB40B-207ENST00000572603 CSB-PGBD3P0DP91 1061 aa29.85■■■□□ 2.37
RAB40B-207ENST00000572603 RBM6P78332 1123 aaKnown RBP29.84■■■□□ 2.37
RAB40B-207ENST00000572603 EIF4A2Q14240 407 aaKnown RBP29.84■■■□□ 2.37
RAB40B-207ENST00000572603 TOM1L2Q6ZVM7 507 aa29.84■■■□□ 2.37
RAB40B-207ENST00000572603 CARD10Q9BWT7 1032 aa29.84■■■□□ 2.37
RAB40B-207ENST00000572603 PARP4Q9UKK3 1724 aaKnown RBP29.84■■■□□ 2.37
RAB40B-207ENST00000572603 CCDC9Q9Y3X0 531 aaKnown RBP29.83■■■□□ 2.37
RAB40B-207ENST00000572603 DISP2A7MBM2 1401 aa29.82■■■□□ 2.36
RAB40B-207ENST00000572603 RGS12O14924 1447 aa29.82■■■□□ 2.36
RAB40B-207ENST00000572603 MYBBP1AQ9BQG0 1328 aaKnown RBP29.82■■■□□ 2.36
RAB40B-207ENST00000572603 BRWD3Q6RI45 1802 aa29.81■■■□□ 2.36
RAB40B-207ENST00000572603 LRRC37A3O60309 1634 aa29.81■■■□□ 2.36
RAB40B-207ENST00000572603 RXRBP28702 533 aa29.8■■■□□ 2.36
RAB40B-207ENST00000572603 NLRP2Q9NX02 1062 aa29.8■■■□□ 2.36
RAB40B-207ENST00000572603 NBPF6Q5VWK0 638 aa29.79■■■□□ 2.36
RAB40B-207ENST00000572603 TCP11L2Q8N4U5 519 aa29.79■■■□□ 2.36
RAB40B-207ENST00000572603 NBPF4Q96M43 638 aa29.79■■■□□ 2.36
RAB40B-207ENST00000572603 USP35Q9P2H5 1018 aa29.79■■■□□ 2.36
RAB40B-207ENST00000572603 IL13P35225 146 aa29.78■■■□□ 2.36
RAB40B-207ENST00000572603 BARGINQ6ZT62 677 aa29.77■■■□□ 2.36
RAB40B-207ENST00000572603 THRAP3Q9Y2W1 955 aaKnown RBP29.77■■■□□ 2.36
RAB40B-207ENST00000572603 IGSF1Q8N6C5 1336 aa29.75■■■□□ 2.35
RAB40B-207ENST00000572603 ONECUT3O60422 494 aaPredicted RBP29.75■■■□□ 2.35
RAB40B-207ENST00000572603 FAM98CQ17RN3 349 aaKnown RBP29.75■■■□□ 2.35
RAB40B-207ENST00000572603 EYA1Q99502 592 aa29.75■■■□□ 2.35
RAB40B-207ENST00000572603 MEGF6O75095 1541 aa29.75■■■□□ 2.35
RAB40B-207ENST00000572603 SHANK3Q9BYB0 1731 aa29.74■■■□□ 2.35
RAB40B-207ENST00000572603 USHBP1Q8N6Y0 703 aa29.74■■■□□ 2.35
RAB40B-207ENST00000572603 PKD1L3Q7Z443 1732 aa29.71■■■□□ 2.35
RAB40B-207ENST00000572603 ANP32CO43423 234 aa29.71■■■□□ 2.35
RAB40B-207ENST00000572603 DIAPH1O60610 1272 aaKnown RBP29.71■■■□□ 2.35
RAB40B-207ENST00000572603 CFAP53Q96M91 514 aa29.71■■■□□ 2.35
RAB40B-207ENST00000572603 KDRP35968 1356 aa29.69■■■□□ 2.34
RAB40B-207ENST00000572603 SEPT12Q8IYM1 358 aa29.67■■■□□ 2.34
RAB40B-207ENST00000572603 OVOS2A0A0G2JMS6 1433 aa29.67■■■□□ 2.34
RAB40B-207ENST00000572603 TNS2Q63HR2 1409 aa29.67■■■□□ 2.34
RAB40B-207ENST00000572603 IL2RBP14784 551 aa29.65■■■□□ 2.34
RAB40B-207ENST00000572603 AEBP1Q8IUX7 1158 aa29.65■■■□□ 2.34
RAB40B-207ENST00000572603 CDCA7Q9BWT1 371 aaPredicted RBP29.64■■■□□ 2.34
RAB40B-207ENST00000572603 DIEXFQ68CQ4 756 aaKnown RBP29.61■■■□□ 2.33
RAB40B-207ENST00000572603 ILDR2Q71H61 639 aa29.61■■■□□ 2.33
RAB40B-207ENST00000572603 A0A0G2JS52 829 aa29.6■■■□□ 2.33
RAB40B-207ENST00000572603 MYT1Q01538 1121 aa29.6■■■□□ 2.33
RAB40B-207ENST00000572603 PLEKHG2Q9H7P9 1386 aa29.6■■■□□ 2.33
RAB40B-207ENST00000572603 CCDC184Q52MB2 194 aa29.59■■■□□ 2.33
RAB40B-207ENST00000572603 SULT6B1Q6IMI4 303 aa29.59■■■□□ 2.33
RAB40B-207ENST00000572603 U2SURPO15042 1029 aaKnown RBP29.58■■■□□ 2.33
RAB40B-207ENST00000572603 RAPGEF4Q8WZA2 1011 aa29.57■■■□□ 2.32
RAB40B-207ENST00000572603 HMOX1P09601 288 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms