RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 DISP2A7MBM2 1401 aa23.56■■□□□ 1.36
RAB40B-205ENST00000571880 FAM196AQ6ZSG2 479 aa23.55■■□□□ 1.36
RAB40B-205ENST00000571880 AXIN2Q9Y2T1 843 aa23.55■■□□□ 1.36
RAB40B-205ENST00000571880 TTC21AQ8NDW8 1320 aa23.55■■□□□ 1.36
RAB40B-205ENST00000571880 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
RAB40B-205ENST00000571880 TOM1L2Q6ZVM7 507 aa23.54■■□□□ 1.36
RAB40B-205ENST00000571880 NME9Q86XW9 330 aa23.53■■□□□ 1.36
RAB40B-205ENST00000571880 ZNF692Q9BU19 519 aaPredicted RBP23.53■■□□□ 1.36
RAB40B-205ENST00000571880 APBA3O96018 575 aa23.51■■□□□ 1.35
RAB40B-205ENST00000571880 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
RAB40B-205ENST00000571880 R3HDM1Q15032 1099 aaKnown RBP23.5■■□□□ 1.35
RAB40B-205ENST00000571880 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
RAB40B-205ENST00000571880 THRAP3Q9Y2W1 955 aaKnown RBP23.5■■□□□ 1.35
RAB40B-205ENST00000571880 WDR17Q8IZU2 1322 aa23.5■■□□□ 1.35
RAB40B-205ENST00000571880 A0A1W2PP64 1363 aa23.5■■□□□ 1.35
RAB40B-205ENST00000571880 CSB-PGBD3P0DP91 1061 aa23.49■■□□□ 1.35
RAB40B-205ENST00000571880 KCNH5Q8NCM2 988 aa23.49■■□□□ 1.35
RAB40B-205ENST00000571880 OVOS2A0A0G2JMS6 1433 aa23.48■■□□□ 1.35
RAB40B-205ENST00000571880 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
RAB40B-205ENST00000571880 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
RAB40B-205ENST00000571880 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
RAB40B-205ENST00000571880 ABCC6O95255 1503 aa23.46■■□□□ 1.35
RAB40B-205ENST00000571880 EDC4Q6P2E9 1401 aaKnown RBP23.46■■□□□ 1.35
RAB40B-205ENST00000571880 HDGFL2Q7Z4V5 671 aaPredicted RBP23.46■■□□□ 1.35
RAB40B-205ENST00000571880 ST20-MTHFSA0A0A6YYL1 179 aa23.45■■□□□ 1.34
RAB40B-205ENST00000571880 RGPD2P0DJD1 1756 aa23.45■■□□□ 1.34
RAB40B-205ENST00000571880 USP31Q70CQ4 1352 aa23.44■■□□□ 1.34
RAB40B-205ENST00000571880 DDB1Q16531 1140 aa23.44■■□□□ 1.34
RAB40B-205ENST00000571880 RGPD3A6NKT7 1758 aaPredicted RBP23.44■■□□□ 1.34
RAB40B-205ENST00000571880 RGPD4Q7Z3J3 1758 aa23.44■■□□□ 1.34
RAB40B-205ENST00000571880 KAT6BQ8WYB5 2073 aa23.44■■□□□ 1.34
RAB40B-205ENST00000571880 TESK2Q96S53 571 aa23.43■■□□□ 1.34
RAB40B-205ENST00000571880 KIF20BQ96Q89 1820 aa23.41■■□□□ 1.34
RAB40B-205ENST00000571880 PTF1AQ7RTS3 328 aa23.41■■□□□ 1.34
RAB40B-205ENST00000571880 PARD3Q8TEW0 1356 aa23.4■■□□□ 1.34
RAB40B-205ENST00000571880 USP47Q96K76 1375 aa23.4■■□□□ 1.34
RAB40B-205ENST00000571880 TERF2IPQ9NYB0 399 aa23.39■■□□□ 1.33
RAB40B-205ENST00000571880 MYOM1P52179 1685 aa23.38■■□□□ 1.33
RAB40B-205ENST00000571880 MARCH10Q8NA82 808 aaPredicted RBP23.38■■□□□ 1.33
RAB40B-205ENST00000571880 CARD10Q9BWT7 1032 aa23.38■■□□□ 1.33
RAB40B-205ENST00000571880 TNS2Q63HR2 1409 aa23.38■■□□□ 1.33
RAB40B-205ENST00000571880 FAM208AQ9UK61 1670 aaKnown RBP23.38■■□□□ 1.33
RAB40B-205ENST00000571880 NHSQ6T4R5 1651 aa23.37■■□□□ 1.33
RAB40B-205ENST00000571880 ERBB3P21860 1342 aa23.36■■□□□ 1.33
RAB40B-205ENST00000571880 NLRP2Q9NX02 1062 aa23.36■■□□□ 1.33
RAB40B-205ENST00000571880 CCDC7Q96M83 1385 aa23.36■■□□□ 1.33
RAB40B-205ENST00000571880 BTAF1O14981 1849 aa23.33■■□□□ 1.33
RAB40B-205ENST00000571880 ANKRD24Q8TF21 1146 aa23.33■■□□□ 1.33
RAB40B-205ENST00000571880 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
RAB40B-205ENST00000571880 FBLN1P23142 703 aa23.32■■□□□ 1.32
RAB40B-205ENST00000571880 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
RAB40B-205ENST00000571880 CDCA7Q9BWT1 371 aaPredicted RBP23.32■■□□□ 1.32
RAB40B-205ENST00000571880 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
RAB40B-205ENST00000571880 SHANK3Q9BYB0 1731 aa23.3■■□□□ 1.32
RAB40B-205ENST00000571880 CASZ1Q86V15 1759 aa23.29■■□□□ 1.32
RAB40B-205ENST00000571880 ANKRD36BQ8N2N9 1353 aa23.29■■□□□ 1.32
RAB40B-205ENST00000571880 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
RAB40B-205ENST00000571880 EXOC5O00471 708 aa23.28■■□□□ 1.32
RAB40B-205ENST00000571880 PUS7Q96PZ0 661 aaKnown RBP23.28■■□□□ 1.32
RAB40B-205ENST00000571880 ANO8Q9HCE9 1232 aaPredicted RBP23.28■■□□□ 1.32
RAB40B-205ENST00000571880 NBPF14Q5TI25 921 aa23.27■■□□□ 1.32
RAB40B-205ENST00000571880 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
RAB40B-205ENST00000571880 COG3Q96JB2 828 aa23.27■■□□□ 1.32
RAB40B-205ENST00000571880 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
RAB40B-205ENST00000571880 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
RAB40B-205ENST00000571880 TMF1P82094 1093 aa23.26■■□□□ 1.31
RAB40B-205ENST00000571880 MAP3K19Q56UN5 1328 aa23.26■■□□□ 1.31
RAB40B-205ENST00000571880 KCNQ2O43526 872 aa23.25■■□□□ 1.31
RAB40B-205ENST00000571880 IL2RBP14784 551 aa23.25■■□□□ 1.31
RAB40B-205ENST00000571880 BCL9O00512 1426 aa23.25■■□□□ 1.31
RAB40B-205ENST00000571880 GGNBP2Q9H3C7 697 aa23.24■■□□□ 1.31
RAB40B-205ENST00000571880 RRS1Q15050 365 aaKnown RBP23.22■■□□□ 1.31
RAB40B-205ENST00000571880 IP6K1Q92551 441 aa23.22■■□□□ 1.31
RAB40B-205ENST00000571880 PLSCR1O15162 318 aa23.21■■□□□ 1.31
RAB40B-205ENST00000571880 HOXC9P31274 260 aa23.21■■□□□ 1.31
RAB40B-205ENST00000571880 AMPHP49418 695 aa23.2■■□□□ 1.3
RAB40B-205ENST00000571880 MEGF6O75095 1541 aa23.19■■□□□ 1.3
RAB40B-205ENST00000571880 PROM2Q8N271 834 aa23.19■■□□□ 1.3
RAB40B-205ENST00000571880 PDGFDQ9GZP0 370 aaPredicted RBP23.19■■□□□ 1.3
RAB40B-205ENST00000571880 PAPPAQ13219 1627 aa23.19■■□□□ 1.3
RAB40B-205ENST00000571880 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
RAB40B-205ENST00000571880 FYB1O15117 783 aa23.17■■□□□ 1.3
RAB40B-205ENST00000571880 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
RAB40B-205ENST00000571880 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
RAB40B-205ENST00000571880 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
RAB40B-205ENST00000571880 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
RAB40B-205ENST00000571880 POLR3GLQ9BT43 218 aa23.16■■□□□ 1.3
RAB40B-205ENST00000571880 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
RAB40B-205ENST00000571880 SLC24A1O60721 1099 aa23.15■■□□□ 1.3
RAB40B-205ENST00000571880 RTL1A6NKG5 1358 aa23.14■■□□□ 1.3
RAB40B-205ENST00000571880 ANKRD26Q9UPS8 1709 aa23.14■■□□□ 1.3
RAB40B-205ENST00000571880 PPP1R1BQ9UD71 204 aaPredicted RBP23.13■■□□□ 1.29
RAB40B-205ENST00000571880 SPON1Q9HCB6 807 aa23.12■■□□□ 1.29
RAB40B-205ENST00000571880 ZBTB7AO95365 584 aa23.11■■□□□ 1.29
RAB40B-205ENST00000571880 CARD14Q9BXL6 1004 aa23.11■■□□□ 1.29
RAB40B-205ENST00000571880 STK32BQ9NY57 414 aa23.11■■□□□ 1.29
RAB40B-205ENST00000571880 LY75O60449 1722 aa23.11■■□□□ 1.29
RAB40B-205ENST00000571880 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
RAB40B-205ENST00000571880 CDCA8Q53HL2 280 aa23.1■■□□□ 1.29
RAB40B-205ENST00000571880 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms