RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
LITAF-208ENST00000571627 OVOS2A0A0J9YW53 1432 aa20.34■□□□□ 0.85
LITAF-208ENST00000571627 OVOS2Q6IE36 1432 aa20.34■□□□□ 0.85
LITAF-208ENST00000571627 FAM182BQ5T319 152 aa20.32■□□□□ 0.84
LITAF-208ENST00000571627 CRB1P82279 1406 aa20.32■□□□□ 0.84
LITAF-208ENST00000571627 CDCA8Q53HL2 280 aa20.31■□□□□ 0.84
LITAF-208ENST00000571627 WNK3Q9BYP7 1800 aa20.31■□□□□ 0.84
LITAF-208ENST00000571627 KIF20BQ96Q89 1820 aa20.3■□□□□ 0.84
LITAF-208ENST00000571627 HSPA5P11021 654 aaKnown RBP20.3■□□□□ 0.84
LITAF-208ENST00000571627 TCP11L2Q8N4U5 519 aa20.3■□□□□ 0.84
LITAF-208ENST00000571627 ABCC6O95255 1503 aa20.29■□□□□ 0.84
LITAF-208ENST00000571627 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
LITAF-208ENST00000571627 BLMP54132 1417 aaPredicted RBP20.28■□□□□ 0.84
LITAF-208ENST00000571627 PARP4Q9UKK3 1724 aaKnown RBP20.28■□□□□ 0.84
LITAF-208ENST00000571627 EIF4G2P78344 907 aaKnown RBP eCLIP20.28■□□□□ 0.84
LITAF-208ENST00000571627 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
LITAF-208ENST00000571627 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.83
LITAF-208ENST00000571627 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
LITAF-208ENST00000571627 LRRC37A3O60309 1634 aa20.26■□□□□ 0.83
LITAF-208ENST00000571627 CCDC125Q86Z20 511 aa20.25■□□□□ 0.83
LITAF-208ENST00000571627 COG3Q96JB2 828 aa20.25■□□□□ 0.83
LITAF-208ENST00000571627 RGPD1P0DJD0 1748 aa20.24■□□□□ 0.83
LITAF-208ENST00000571627 CSB-PGBD3P0DP91 1061 aa20.24■□□□□ 0.83
LITAF-208ENST00000571627 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
LITAF-208ENST00000571627 FBLN1P23142 703 aa20.23■□□□□ 0.83
LITAF-208ENST00000571627 GGNBP2Q9H3C7 697 aa20.23■□□□□ 0.83
LITAF-208ENST00000571627 TNS1Q9HBL0 1735 aaKnown RBP20.23■□□□□ 0.83
LITAF-208ENST00000571627 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
LITAF-208ENST00000571627 FYB1O15117 783 aa20.22■□□□□ 0.83
LITAF-208ENST00000571627 DEFB132Q7Z7B7 95 aa20.22■□□□□ 0.83
LITAF-208ENST00000571627 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
LITAF-208ENST00000571627 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
LITAF-208ENST00000571627 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
LITAF-208ENST00000571627 ERBB3P21860 1342 aa20.2■□□□□ 0.82
LITAF-208ENST00000571627 CARD10Q9BWT7 1032 aa20.19■□□□□ 0.82
LITAF-208ENST00000571627 MAP3K19Q56UN5 1328 aa20.19■□□□□ 0.82
LITAF-208ENST00000571627 ANKRD24Q8TF21 1146 aa20.18■□□□□ 0.82
LITAF-208ENST00000571627 PEAK1Q9H792 1746 aa20.17■□□□□ 0.82
LITAF-208ENST00000571627 RGPD2P0DJD1 1756 aa20.17■□□□□ 0.82
LITAF-208ENST00000571627 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
LITAF-208ENST00000571627 FAM208AQ9UK61 1670 aaKnown RBP20.16■□□□□ 0.82
LITAF-208ENST00000571627 C11orf95C9JLR9 678 aaPredicted RBP20.16■□□□□ 0.82
LITAF-208ENST00000571627 FAM196AQ6ZSG2 479 aa20.16■□□□□ 0.82
LITAF-208ENST00000571627 IP6K1Q92551 441 aa20.16■□□□□ 0.82
LITAF-208ENST00000571627 NLRP2Q9NX02 1062 aa20.16■□□□□ 0.82
LITAF-208ENST00000571627 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
LITAF-208ENST00000571627 TRIM37O94972 964 aa20.15■□□□□ 0.82
LITAF-208ENST00000571627 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
LITAF-208ENST00000571627 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
LITAF-208ENST00000571627 SBF2Q86WG5 1849 aa20.14■□□□□ 0.81
LITAF-208ENST00000571627 HOXC9P31274 260 aa20.14■□□□□ 0.81
LITAF-208ENST00000571627 AMPHP49418 695 aa20.14■□□□□ 0.81
LITAF-208ENST00000571627 DDB1Q16531 1140 aa20.14■□□□□ 0.81
LITAF-208ENST00000571627 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
LITAF-208ENST00000571627 BAG6P46379 1132 aa20.13■□□□□ 0.81
LITAF-208ENST00000571627 OVOS2A0A0G2JMS6 1433 aa20.12■□□□□ 0.81
LITAF-208ENST00000571627 CDCA7Q9BWT1 371 aaPredicted RBP20.12■□□□□ 0.81
LITAF-208ENST00000571627 RTL1A6NKG5 1358 aa20.11■□□□□ 0.81
LITAF-208ENST00000571627 TNS2Q63HR2 1409 aa20.1■□□□□ 0.81
LITAF-208ENST00000571627 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
LITAF-208ENST00000571627 EN1Q05925 392 aaPredicted RBP20.1■□□□□ 0.81
LITAF-208ENST00000571627 MAP2P11137 1827 aaKnown RBP20.09■□□□□ 0.81
LITAF-208ENST00000571627 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
LITAF-208ENST00000571627 PANK3Q9H999 370 aa20.09■□□□□ 0.81
LITAF-208ENST00000571627 KIF7Q2M1P5 1343 aa20.07■□□□□ 0.8
LITAF-208ENST00000571627 IL2RBP14784 551 aa20.07■□□□□ 0.8
LITAF-208ENST00000571627 EXOC5O00471 708 aa20.06■□□□□ 0.8
LITAF-208ENST00000571627 APBA3O96018 575 aa20.06■□□□□ 0.8
LITAF-208ENST00000571627 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
LITAF-208ENST00000571627 EZH2Q15910 746 aaKnown RBP20.05■□□□□ 0.8
LITAF-208ENST00000571627 RREB1Q92766 1687 aa20.05■□□□□ 0.8
LITAF-208ENST00000571627 FLT4P35916 1363 aa20.05■□□□□ 0.8
LITAF-208ENST00000571627 HSP90AB2PQ58FF8 381 aa20.04■□□□□ 0.8
LITAF-208ENST00000571627 PTF1AQ7RTS3 328 aa20.03■□□□□ 0.8
LITAF-208ENST00000571627 INSRP06213 1382 aa20.03■□□□□ 0.8
LITAF-208ENST00000571627 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
LITAF-208ENST00000571627 NUP188Q5SRE5 1749 aa20.02■□□□□ 0.8
LITAF-208ENST00000571627 SHANK3Q9BYB0 1731 aa20.02■□□□□ 0.8
LITAF-208ENST00000571627 PPM1GO15355 546 aaPredicted RBP20.02■□□□□ 0.8
LITAF-208ENST00000571627 TNNT2P45379 298 aaPredicted RBP20.02■□□□□ 0.8
LITAF-208ENST00000571627 USHBP1Q8N6Y0 703 aa20.02■□□□□ 0.8
LITAF-208ENST00000571627 CAMKK2Q96RR4 588 aa20.02■□□□□ 0.8
LITAF-208ENST00000571627 MEGF6O75095 1541 aa20.02■□□□□ 0.79
LITAF-208ENST00000571627 KIF24Q5T7B8 1368 aa20.01■□□□□ 0.79
LITAF-208ENST00000571627 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
LITAF-208ENST00000571627 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
LITAF-208ENST00000571627 KAT6BQ8WYB5 2073 aa20.01■□□□□ 0.79
LITAF-208ENST00000571627 BCL9O00512 1426 aa20.01■□□□□ 0.79
LITAF-208ENST00000571627 NHSQ6T4R5 1651 aa20■□□□□ 0.79
LITAF-208ENST00000571627 RGPD3A6NKT7 1758 aaPredicted RBP19.99■□□□□ 0.79
LITAF-208ENST00000571627 RGPD4Q7Z3J3 1758 aa19.99■□□□□ 0.79
LITAF-208ENST00000571627 SRCAPQ6ZRS2 3230 aa19.99■□□□□ 0.79
LITAF-208ENST00000571627 NSD2O96028 1365 aa19.97■□□□□ 0.79
LITAF-208ENST00000571627 PARD3Q8TEW0 1356 aa19.97■□□□□ 0.79
LITAF-208ENST00000571627 PSDA5PKW4 1024 aaPredicted RBP19.97■□□□□ 0.79
LITAF-208ENST00000571627 BCL11BQ9C0K0 894 aaPredicted RBP19.97■□□□□ 0.79
LITAF-208ENST00000571627 POLKQ9UBT6 870 aa19.97■□□□□ 0.79
LITAF-208ENST00000571627 KCNQ2O43526 872 aa19.96■□□□□ 0.79
LITAF-208ENST00000571627 ACSBG1Q96GR2 724 aa19.96■□□□□ 0.79
LITAF-208ENST00000571627 KNSTRNQ9Y448 316 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms