RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
CIITA-206ENST00000571190 C11orf95C9JLR9 678 aaPredicted RBP25.03■■□□□ 1.6
CIITA-206ENST00000571190 PTF1AQ7RTS3 328 aa25.03■■□□□ 1.6
CIITA-206ENST00000571190 PARP4Q9UKK3 1724 aaKnown RBP25.03■■□□□ 1.6
CIITA-206ENST00000571190 MARCH10Q8NA82 808 aaPredicted RBP25.02■■□□□ 1.6
CIITA-206ENST00000571190 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
CIITA-206ENST00000571190 CD163L1Q9NR16 1453 aa25.01■■□□□ 1.59
CIITA-206ENST00000571190 NFAT5O94916 1531 aa25.01■■□□□ 1.59
CIITA-206ENST00000571190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25■■□□□ 1.59
CIITA-206ENST00000571190 USP31Q70CQ4 1352 aa25■■□□□ 1.59
CIITA-206ENST00000571190 NBPF14Q5TI25 921 aa24.99■■□□□ 1.59
CIITA-206ENST00000571190 PEAK1Q9H792 1746 aa24.99■■□□□ 1.59
CIITA-206ENST00000571190 PLSCR1O15162 318 aa24.98■■□□□ 1.59
CIITA-206ENST00000571190 CSB-PGBD3P0DP91 1061 aa24.98■■□□□ 1.59
CIITA-206ENST00000571190 NME9Q86XW9 330 aa24.98■■□□□ 1.59
CIITA-206ENST00000571190 CDCA7Q9BWT1 371 aaPredicted RBP24.98■■□□□ 1.59
CIITA-206ENST00000571190 SLC12A5Q9H2X9 1139 aa24.98■■□□□ 1.59
CIITA-206ENST00000571190 LRRC37A3O60309 1634 aa24.97■■□□□ 1.59
CIITA-206ENST00000571190 BCL11BQ9C0K0 894 aaPredicted RBP24.97■■□□□ 1.59
CIITA-206ENST00000571190 RREB1Q92766 1687 aa24.97■■□□□ 1.59
CIITA-206ENST00000571190 BCL9O00512 1426 aa24.96■■□□□ 1.59
CIITA-206ENST00000571190 AKAP12Q02952 1782 aa24.95■■□□□ 1.59
CIITA-206ENST00000571190 PROM2Q8N271 834 aa24.94■■□□□ 1.58
CIITA-206ENST00000571190 TMC1Q8TDI8 760 aa24.94■■□□□ 1.58
CIITA-206ENST00000571190 NUP188Q5SRE5 1749 aa24.93■■□□□ 1.58
CIITA-206ENST00000571190 TONSLQ96HA7 1378 aa24.93■■□□□ 1.58
CIITA-206ENST00000571190 ANO8Q9HCE9 1232 aaPredicted RBP24.92■■□□□ 1.58
CIITA-206ENST00000571190 CCDC7Q96M83 1385 aa24.92■■□□□ 1.58
CIITA-206ENST00000571190 EXOC5O00471 708 aa24.91■■□□□ 1.58
CIITA-206ENST00000571190 PUS7Q96PZ0 661 aaKnown RBP24.91■■□□□ 1.58
CIITA-206ENST00000571190 ERBB3P21860 1342 aa24.9■■□□□ 1.58
CIITA-206ENST00000571190 HDGFL2Q7Z4V5 671 aaPredicted RBP24.9■■□□□ 1.58
CIITA-206ENST00000571190 ABCC6O95255 1503 aa24.9■■□□□ 1.58
CIITA-206ENST00000571190 TESK2Q96S53 571 aa24.89■■□□□ 1.58
CIITA-206ENST00000571190 A0A1W2PP64 1363 aa24.89■■□□□ 1.57
CIITA-206ENST00000571190 EDC4Q6P2E9 1401 aaKnown RBP24.88■■□□□ 1.57
CIITA-206ENST00000571190 MON2Q7Z3U7 1717 aa24.88■■□□□ 1.57
CIITA-206ENST00000571190 KCNQ2O43526 872 aa24.86■■□□□ 1.57
CIITA-206ENST00000571190 SPON1Q9HCB6 807 aa24.86■■□□□ 1.57
CIITA-206ENST00000571190 NLRP2Q9NX02 1062 aa24.86■■□□□ 1.57
CIITA-206ENST00000571190 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
CIITA-206ENST00000571190 TNS2Q63HR2 1409 aa24.85■■□□□ 1.57
CIITA-206ENST00000571190 ST20-MTHFSA0A0A6YYL1 179 aa24.84■■□□□ 1.57
CIITA-206ENST00000571190 ANKRD24Q8TF21 1146 aa24.84■■□□□ 1.57
CIITA-206ENST00000571190 PDGFDQ9GZP0 370 aaPredicted RBP24.84■■□□□ 1.57
CIITA-206ENST00000571190 TXNRD1Q16881 649 aa24.83■■□□□ 1.57
CIITA-206ENST00000571190 USP54Q70EL1 1684 aa24.82■■□□□ 1.56
CIITA-206ENST00000571190 WNK3Q9BYP7 1800 aa24.82■■□□□ 1.56
CIITA-206ENST00000571190 RGPD5Q99666 1765 aa24.81■■□□□ 1.56
CIITA-206ENST00000571190 IL2RBP14784 551 aa24.81■■□□□ 1.56
CIITA-206ENST00000571190 SBF2Q86WG5 1849 aa24.79■■□□□ 1.56
CIITA-206ENST00000571190 IP6K1Q92551 441 aa24.79■■□□□ 1.56
CIITA-206ENST00000571190 ACSBG1Q96GR2 724 aa24.79■■□□□ 1.56
CIITA-206ENST00000571190 RGPD3A6NKT7 1758 aaPredicted RBP24.79■■□□□ 1.56
CIITA-206ENST00000571190 RGPD4Q7Z3J3 1758 aa24.79■■□□□ 1.56
CIITA-206ENST00000571190 FBLN1P23142 703 aa24.76■■□□□ 1.55
CIITA-206ENST00000571190 PPP1R1BQ9UD71 204 aaPredicted RBP24.76■■□□□ 1.55
CIITA-206ENST00000571190 NINLQ9Y2I6 1382 aa24.76■■□□□ 1.55
CIITA-206ENST00000571190 SLC15A2Q16348 729 aa24.75■■□□□ 1.55
CIITA-206ENST00000571190 MAP3K19Q56UN5 1328 aa24.73■■□□□ 1.55
CIITA-206ENST00000571190 ZBTB7AO95365 584 aa24.73■■□□□ 1.55
CIITA-206ENST00000571190 STK32BQ9NY57 414 aa24.73■■□□□ 1.55
CIITA-206ENST00000571190 PTGER2P43116 358 aa24.72■■□□□ 1.55
CIITA-206ENST00000571190 LTV1Q96GA3 475 aaPredicted RBP24.72■■□□□ 1.55
CIITA-206ENST00000571190 COG3Q96JB2 828 aa24.72■■□□□ 1.55
CIITA-206ENST00000571190 SLC24A1O60721 1099 aa24.7■■□□□ 1.54
CIITA-206ENST00000571190 HOXC9P31274 260 aa24.7■■□□□ 1.54
CIITA-206ENST00000571190 CASZ1Q86V15 1759 aa24.7■■□□□ 1.54
CIITA-206ENST00000571190 ANKRD36BQ8N2N9 1353 aa24.69■■□□□ 1.54
CIITA-206ENST00000571190 TRIM26Q12899 539 aaPredicted RBP24.69■■□□□ 1.54
CIITA-206ENST00000571190 ATF5Q9Y2D1 282 aaPredicted RBP24.69■■□□□ 1.54
CIITA-206ENST00000571190 FYB1O15117 783 aa24.67■■□□□ 1.54
CIITA-206ENST00000571190 DDX54Q8TDD1 881 aaKnown RBP24.67■■□□□ 1.54
CIITA-206ENST00000571190 LRRC4BQ9NT99 713 aa24.67■■□□□ 1.54
CIITA-206ENST00000571190 NHSQ6T4R5 1651 aa24.66■■□□□ 1.54
CIITA-206ENST00000571190 LTN1O94822 1766 aa24.66■■□□□ 1.54
CIITA-206ENST00000571190 USP47Q96K76 1375 aa24.66■■□□□ 1.54
CIITA-206ENST00000571190 AMPHP49418 695 aa24.65■■□□□ 1.54
CIITA-206ENST00000571190 SGIP1Q9BQI5 828 aa24.65■■□□□ 1.54
CIITA-206ENST00000571190 TMF1P82094 1093 aa24.64■■□□□ 1.54
CIITA-206ENST00000571190 ZNF827Q17R98 1081 aa24.64■■□□□ 1.54
CIITA-206ENST00000571190 GGNBP2Q9H3C7 697 aa24.64■■□□□ 1.54
CIITA-206ENST00000571190 RRS1Q15050 365 aaKnown RBP24.63■■□□□ 1.53
CIITA-206ENST00000571190 YY1P25490 414 aa24.62■■□□□ 1.53
CIITA-206ENST00000571190 MTFR1LQ9H019 292 aa24.62■■□□□ 1.53
CIITA-206ENST00000571190 NBPF6Q5VWK0 638 aa24.6■■□□□ 1.53
CIITA-206ENST00000571190 NBPF4Q96M43 638 aa24.6■■□□□ 1.53
CIITA-206ENST00000571190 PAPPAQ13219 1627 aa24.6■■□□□ 1.53
CIITA-206ENST00000571190 PRIM1P49642 420 aaKnown RBP24.59■■□□□ 1.53
CIITA-206ENST00000571190 MEGF6O75095 1541 aa24.59■■□□□ 1.53
CIITA-206ENST00000571190 RTL1A6NKG5 1358 aa24.58■■□□□ 1.53
CIITA-206ENST00000571190 ZCRB1Q8TBF4 217 aaKnown RBP24.58■■□□□ 1.53
CIITA-206ENST00000571190 AKT1S1Q96B36 256 aa24.58■■□□□ 1.53
CIITA-206ENST00000571190 FHDC1Q9C0D6 1143 aaPredicted RBP24.58■■□□□ 1.53
CIITA-206ENST00000571190 SYT17Q9BSW7 474 aa24.57■■□□□ 1.52
CIITA-206ENST00000571190 NSD2O96028 1365 aa24.56■■□□□ 1.52
CIITA-206ENST00000571190 USHBP1Q8N6Y0 703 aa24.56■■□□□ 1.52
CIITA-206ENST00000571190 CARD14Q9BXL6 1004 aa24.56■■□□□ 1.52
CIITA-206ENST00000571190 FAM208AQ9UK61 1670 aaKnown RBP24.56■■□□□ 1.52
CIITA-206ENST00000571190 KCNQ4P56696 695 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms