RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 SOX12O15370 315 aa20.55■□□□□ 0.88
CIITA-205ENST00000571186 LRRC37A3O60309 1634 aa20.55■□□□□ 0.88
CIITA-205ENST00000571186 KAT6BQ8WYB5 2073 aa20.55■□□□□ 0.88
CIITA-205ENST00000571186 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
CIITA-205ENST00000571186 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
CIITA-205ENST00000571186 L3MBTL2Q969R5 705 aa20.54■□□□□ 0.88
CIITA-205ENST00000571186 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
CIITA-205ENST00000571186 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
CIITA-205ENST00000571186 WDR17Q8IZU2 1322 aa20.53■□□□□ 0.88
CIITA-205ENST00000571186 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
CIITA-205ENST00000571186 MARCH10Q8NA82 808 aaPredicted RBP20.53■□□□□ 0.88
CIITA-205ENST00000571186 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
CIITA-205ENST00000571186 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
CIITA-205ENST00000571186 WNK3Q9BYP7 1800 aa20.53■□□□□ 0.88
CIITA-205ENST00000571186 ARHGEF25Q86VW2 580 aa20.52■□□□□ 0.88
CIITA-205ENST00000571186 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
CIITA-205ENST00000571186 CDCA7Q9BWT1 371 aaPredicted RBP20.52■□□□□ 0.88
CIITA-205ENST00000571186 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.87
CIITA-205ENST00000571186 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
CIITA-205ENST00000571186 TRPM1Q7Z4N2 1603 aa20.49■□□□□ 0.87
CIITA-205ENST00000571186 PROM2Q8N271 834 aa20.49■□□□□ 0.87
CIITA-205ENST00000571186 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
CIITA-205ENST00000571186 CPSF1Q10570 1443 aaKnown RBP20.49■□□□□ 0.87
CIITA-205ENST00000571186 EXOC5O00471 708 aa20.48■□□□□ 0.87
CIITA-205ENST00000571186 NINLQ9Y2I6 1382 aa20.47■□□□□ 0.87
CIITA-205ENST00000571186 SIN3AQ96ST3 1273 aa20.47■□□□□ 0.87
CIITA-205ENST00000571186 PDGFDQ9GZP0 370 aaPredicted RBP20.47■□□□□ 0.87
CIITA-205ENST00000571186 TTC21AQ8NDW8 1320 aa20.47■□□□□ 0.87
CIITA-205ENST00000571186 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
CIITA-205ENST00000571186 ROCK2O75116 1388 aaKnown RBP20.46■□□□□ 0.87
CIITA-205ENST00000571186 CASZ1Q86V15 1759 aa20.45■□□□□ 0.86
CIITA-205ENST00000571186 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
CIITA-205ENST00000571186 KTN1Q86UP2 1357 aaKnown RBP20.45■□□□□ 0.86
CIITA-205ENST00000571186 TXNRD1Q16881 649 aa20.44■□□□□ 0.86
CIITA-205ENST00000571186 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
CIITA-205ENST00000571186 BCL9O00512 1426 aa20.44■□□□□ 0.86
CIITA-205ENST00000571186 STK32BQ9NY57 414 aa20.43■□□□□ 0.86
CIITA-205ENST00000571186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.42■□□□□ 0.86
CIITA-205ENST00000571186 CCDC7Q96M83 1385 aa20.41■□□□□ 0.86
CIITA-205ENST00000571186 NFAT5O94916 1531 aa20.4■□□□□ 0.86
CIITA-205ENST00000571186 SLC15A2Q16348 729 aa20.4■□□□□ 0.86
CIITA-205ENST00000571186 ACSBG1Q96GR2 724 aa20.39■□□□□ 0.85
CIITA-205ENST00000571186 NLRP2Q9NX02 1062 aa20.39■□□□□ 0.85
CIITA-205ENST00000571186 PTGER2P43116 358 aa20.38■□□□□ 0.85
CIITA-205ENST00000571186 MON2Q7Z3U7 1717 aa20.38■□□□□ 0.85
CIITA-205ENST00000571186 LTN1O94822 1766 aa20.37■□□□□ 0.85
CIITA-205ENST00000571186 MYOM1P52179 1685 aa20.37■□□□□ 0.85
CIITA-205ENST00000571186 TMC1Q8TDI8 760 aa20.36■□□□□ 0.85
CIITA-205ENST00000571186 TNS2Q63HR2 1409 aa20.36■□□□□ 0.85
CIITA-205ENST00000571186 NME9Q86XW9 330 aa20.35■□□□□ 0.85
CIITA-205ENST00000571186 ABCC6O95255 1503 aa20.34■□□□□ 0.85
CIITA-205ENST00000571186 IL2RBP14784 551 aa20.34■□□□□ 0.85
CIITA-205ENST00000571186 NHSQ6T4R5 1651 aa20.34■□□□□ 0.85
CIITA-205ENST00000571186 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
CIITA-205ENST00000571186 ERBB3P21860 1342 aa20.33■□□□□ 0.85
CIITA-205ENST00000571186 FHDC1Q9C0D6 1143 aaPredicted RBP20.33■□□□□ 0.85
CIITA-205ENST00000571186 MTFR1LQ9H019 292 aa20.33■□□□□ 0.85
CIITA-205ENST00000571186 CHD4Q14839 1912 aa20.32■□□□□ 0.84
CIITA-205ENST00000571186 HDGFL2Q7Z4V5 671 aaPredicted RBP20.32■□□□□ 0.84
CIITA-205ENST00000571186 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
CIITA-205ENST00000571186 SYT17Q9BSW7 474 aa20.32■□□□□ 0.84
CIITA-205ENST00000571186 BTAF1O14981 1849 aa20.32■□□□□ 0.84
CIITA-205ENST00000571186 UTRNP46939 3433 aa20.31■□□□□ 0.84
CIITA-205ENST00000571186 CARD11Q9BXL7 1154 aa20.31■□□□□ 0.84
CIITA-205ENST00000571186 PCGF6Q9BYE7 350 aa20.31■□□□□ 0.84
CIITA-205ENST00000571186 SLC12A5Q9H2X9 1139 aa20.31■□□□□ 0.84
CIITA-205ENST00000571186 SBNO2Q9Y2G9 1366 aa20.3■□□□□ 0.84
CIITA-205ENST00000571186 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
CIITA-205ENST00000571186 CD163L1Q9NR16 1453 aa20.28■□□□□ 0.84
CIITA-205ENST00000571186 ARXQ96QS3 562 aa20.27■□□□□ 0.84
CIITA-205ENST00000571186 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
CIITA-205ENST00000571186 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
CIITA-205ENST00000571186 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
CIITA-205ENST00000571186 LTV1Q96GA3 475 aaPredicted RBP20.26■□□□□ 0.83
CIITA-205ENST00000571186 ZNF784Q8NCA9 323 aaPredicted RBP20.25■□□□□ 0.83
CIITA-205ENST00000571186 LRRC4BQ9NT99 713 aa20.25■□□□□ 0.83
CIITA-205ENST00000571186 EDC4Q6P2E9 1401 aaKnown RBP20.25■□□□□ 0.83
CIITA-205ENST00000571186 ZNF827Q17R98 1081 aa20.24■□□□□ 0.83
CIITA-205ENST00000571186 IP6K1Q92551 441 aa20.24■□□□□ 0.83
CIITA-205ENST00000571186 PAPPAQ13219 1627 aa20.23■□□□□ 0.83
CIITA-205ENST00000571186 A0A1W2PP64 1363 aa20.21■□□□□ 0.83
CIITA-205ENST00000571186 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
CIITA-205ENST00000571186 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
CIITA-205ENST00000571186 KLHL34Q8N239 644 aa20.19■□□□□ 0.82
CIITA-205ENST00000571186 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
CIITA-205ENST00000571186 FAM208AQ9UK61 1670 aaKnown RBP20.19■□□□□ 0.82
CIITA-205ENST00000571186 RGPD2P0DJD1 1756 aa20.18■□□□□ 0.82
CIITA-205ENST00000571186 PRIM1P49642 420 aaKnown RBP20.18■□□□□ 0.82
CIITA-205ENST00000571186 GPR162Q16538 588 aa20.18■□□□□ 0.82
CIITA-205ENST00000571186 SLC16A10Q8TF71 515 aa20.18■□□□□ 0.82
CIITA-205ENST00000571186 COG3Q96JB2 828 aa20.18■□□□□ 0.82
CIITA-205ENST00000571186 PUS7Q96PZ0 661 aaKnown RBP20.18■□□□□ 0.82
CIITA-205ENST00000571186 AMPHP49418 695 aa20.17■□□□□ 0.82
CIITA-205ENST00000571186 KCNQ4P56696 695 aa20.17■□□□□ 0.82
CIITA-205ENST00000571186 TFCP2L1Q9NZI6 479 aa20.17■□□□□ 0.82
CIITA-205ENST00000571186 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
CIITA-205ENST00000571186 FBLN1P23142 703 aa20.16■□□□□ 0.82
CIITA-205ENST00000571186 POLD1P28340 1107 aa20.16■□□□□ 0.82
CIITA-205ENST00000571186 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
CIITA-205ENST00000571186 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms