RNA–Protein interactions for RNA: ENST00000571178.1

PAM16-202, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-202ENST00000571178 THRAP3Q9Y2W1 955 aaKnown RBP20.58■□□□□ 0.89
PAM16-202ENST00000571178 CSB-PGBD3P0DP91 1061 aa20.57■□□□□ 0.88
PAM16-202ENST00000571178 CRB1P82279 1406 aa20.56■□□□□ 0.88
PAM16-202ENST00000571178 HDGFL2Q7Z4V5 671 aaPredicted RBP20.56■□□□□ 0.88
PAM16-202ENST00000571178 WDR17Q8IZU2 1322 aa20.55■□□□□ 0.88
PAM16-202ENST00000571178 MARCH10Q8NA82 808 aaPredicted RBP20.55■□□□□ 0.88
PAM16-202ENST00000571178 COL18A1P39060 1754 aa20.54■□□□□ 0.88
PAM16-202ENST00000571178 DDB1Q16531 1140 aa20.53■□□□□ 0.88
PAM16-202ENST00000571178 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
PAM16-202ENST00000571178 USP31Q70CQ4 1352 aa20.52■□□□□ 0.88
PAM16-202ENST00000571178 CARD10Q9BWT7 1032 aa20.52■□□□□ 0.88
PAM16-202ENST00000571178 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
PAM16-202ENST00000571178 TERF2IPQ9NYB0 399 aa20.51■□□□□ 0.87
PAM16-202ENST00000571178 NFAT5O94916 1531 aa20.5■□□□□ 0.87
PAM16-202ENST00000571178 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
PAM16-202ENST00000571178 PUS7Q96PZ0 661 aaKnown RBP20.49■□□□□ 0.87
PAM16-202ENST00000571178 NLRP2Q9NX02 1062 aa20.49■□□□□ 0.87
PAM16-202ENST00000571178 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
PAM16-202ENST00000571178 EXOC5O00471 708 aa20.46■□□□□ 0.87
PAM16-202ENST00000571178 DISP2A7MBM2 1401 aa20.45■□□□□ 0.86
PAM16-202ENST00000571178 EDC4Q6P2E9 1401 aaKnown RBP20.45■□□□□ 0.86
PAM16-202ENST00000571178 RGPD5Q99666 1765 aa20.45■□□□□ 0.86
PAM16-202ENST00000571178 KCNQ2O43526 872 aa20.45■□□□□ 0.86
PAM16-202ENST00000571178 USP47Q96K76 1375 aa20.45■□□□□ 0.86
PAM16-202ENST00000571178 TNS1Q9HBL0 1735 aaKnown RBP20.44■□□□□ 0.86
PAM16-202ENST00000571178 PROM2Q8N271 834 aa20.44■□□□□ 0.86
PAM16-202ENST00000571178 GGNBP2Q9H3C7 697 aa20.44■□□□□ 0.86
PAM16-202ENST00000571178 RGPD1P0DJD0 1748 aa20.43■□□□□ 0.86
PAM16-202ENST00000571178 MON2Q7Z3U7 1717 aa20.42■□□□□ 0.86
PAM16-202ENST00000571178 FYB1O15117 783 aa20.42■□□□□ 0.86
PAM16-202ENST00000571178 TMF1P82094 1093 aa20.42■□□□□ 0.86
PAM16-202ENST00000571178 IP6K1Q92551 441 aa20.42■□□□□ 0.86
PAM16-202ENST00000571178 ACSBG1Q96GR2 724 aa20.42■□□□□ 0.86
PAM16-202ENST00000571178 ERBB3P21860 1342 aa20.42■□□□□ 0.86
PAM16-202ENST00000571178 COG3Q96JB2 828 aa20.41■□□□□ 0.86
PAM16-202ENST00000571178 CARD14Q9BXL6 1004 aa20.41■□□□□ 0.86
PAM16-202ENST00000571178 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
PAM16-202ENST00000571178 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
PAM16-202ENST00000571178 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
PAM16-202ENST00000571178 MAP3K19Q56UN5 1328 aa20.4■□□□□ 0.86
PAM16-202ENST00000571178 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
PAM16-202ENST00000571178 CDCA7Q9BWT1 371 aaPredicted RBP20.4■□□□□ 0.86
PAM16-202ENST00000571178 OVOS2A0A0G2JMS6 1433 aa20.39■□□□□ 0.85
PAM16-202ENST00000571178 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
PAM16-202ENST00000571178 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.85
PAM16-202ENST00000571178 PDGFDQ9GZP0 370 aaPredicted RBP20.38■□□□□ 0.85
PAM16-202ENST00000571178 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
PAM16-202ENST00000571178 HOXC9P31274 260 aa20.37■□□□□ 0.85
PAM16-202ENST00000571178 LRRC37A3O60309 1634 aa20.37■□□□□ 0.85
PAM16-202ENST00000571178 PEAK1Q9H792 1746 aa20.36■□□□□ 0.85
PAM16-202ENST00000571178 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
PAM16-202ENST00000571178 PLSCR1O15162 318 aa20.36■□□□□ 0.85
PAM16-202ENST00000571178 IL2RBP14784 551 aa20.36■□□□□ 0.85
PAM16-202ENST00000571178 AMPHP49418 695 aa20.36■□□□□ 0.85
PAM16-202ENST00000571178 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
PAM16-202ENST00000571178 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
PAM16-202ENST00000571178 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
PAM16-202ENST00000571178 POLR3GLQ9BT43 218 aa20.35■□□□□ 0.85
PAM16-202ENST00000571178 USHBP1Q8N6Y0 703 aa20.34■□□□□ 0.85
PAM16-202ENST00000571178 PARD3Q8TEW0 1356 aa20.33■□□□□ 0.84
PAM16-202ENST00000571178 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
PAM16-202ENST00000571178 NBPF6Q5VWK0 638 aa20.32■□□□□ 0.84
PAM16-202ENST00000571178 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
PAM16-202ENST00000571178 NBPF4Q96M43 638 aa20.32■□□□□ 0.84
PAM16-202ENST00000571178 C11orf95C9JLR9 678 aaPredicted RBP20.31■□□□□ 0.84
PAM16-202ENST00000571178 TXNRD1Q16881 649 aa20.31■□□□□ 0.84
PAM16-202ENST00000571178 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
PAM16-202ENST00000571178 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
PAM16-202ENST00000571178 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
PAM16-202ENST00000571178 USP54Q70EL1 1684 aa20.29■□□□□ 0.84
PAM16-202ENST00000571178 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
PAM16-202ENST00000571178 LTN1O94822 1766 aa20.28■□□□□ 0.84
PAM16-202ENST00000571178 BCL9O00512 1426 aa20.27■□□□□ 0.84
PAM16-202ENST00000571178 TNS2Q63HR2 1409 aa20.27■□□□□ 0.84
PAM16-202ENST00000571178 KCNQ4P56696 695 aa20.27■□□□□ 0.84
PAM16-202ENST00000571178 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
PAM16-202ENST00000571178 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
PAM16-202ENST00000571178 EMILIN1Q9Y6C2 1016 aa20.26■□□□□ 0.83
PAM16-202ENST00000571178 NUP188Q5SRE5 1749 aa20.26■□□□□ 0.83
PAM16-202ENST00000571178 ZBTB7AO95365 584 aa20.25■□□□□ 0.83
PAM16-202ENST00000571178 PRIM1P49642 420 aaKnown RBP20.25■□□□□ 0.83
PAM16-202ENST00000571178 ABCC6O95255 1503 aa20.25■□□□□ 0.83
PAM16-202ENST00000571178 RREB1Q92766 1687 aa20.25■□□□□ 0.83
PAM16-202ENST00000571178 WNK3Q9BYP7 1800 aa20.25■□□□□ 0.83
PAM16-202ENST00000571178 ZCRB1Q8TBF4 217 aaKnown RBP20.24■□□□□ 0.83
PAM16-202ENST00000571178 LRRC4BQ9NT99 713 aa20.24■□□□□ 0.83
PAM16-202ENST00000571178 ATF5Q9Y2D1 282 aaPredicted RBP20.24■□□□□ 0.83
PAM16-202ENST00000571178 NSD3Q9BZ95 1437 aa20.24■□□□□ 0.83
PAM16-202ENST00000571178 PPM1GO15355 546 aaPredicted RBP20.23■□□□□ 0.83
PAM16-202ENST00000571178 TNNT2P45379 298 aaPredicted RBP20.22■□□□□ 0.83
PAM16-202ENST00000571178 SPON1Q9HCB6 807 aa20.22■□□□□ 0.83
PAM16-202ENST00000571178 LRP5O75197 1615 aa20.22■□□□□ 0.83
PAM16-202ENST00000571178 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
PAM16-202ENST00000571178 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
PAM16-202ENST00000571178 STK32BQ9NY57 414 aa20.2■□□□□ 0.82
PAM16-202ENST00000571178 MEGF6O75095 1541 aa20.19■□□□□ 0.82
PAM16-202ENST00000571178 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
PAM16-202ENST00000571178 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
PAM16-202ENST00000571178 PANK3Q9H999 370 aa20.18■□□□□ 0.82
PAM16-202ENST00000571178 PPP1R1BQ9UD71 204 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms