RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TCP11L2Q8N4U5 519 aa21.3■■□□□ 1
RAB40B-203ENST00000570676 SLC12A5Q9H2X9 1139 aa21.3■■□□□ 1
RAB40B-203ENST00000570676 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
RAB40B-203ENST00000570676 USP47Q96K76 1375 aa21.3■■□□□ 1
RAB40B-203ENST00000570676 NINLQ9Y2I6 1382 aa21.29■■□□□ 1
RAB40B-203ENST00000570676 KCNH5Q8NCM2 988 aa21.29■■□□□ 1
RAB40B-203ENST00000570676 TMC1Q8TDI8 760 aa21.29■■□□□ 1
RAB40B-203ENST00000570676 THRAP3Q9Y2W1 955 aaKnown RBP21.29■■□□□ 1
RAB40B-203ENST00000570676 OVOS2A0A0J9YW53 1432 aa21.29■■□□□ 1
RAB40B-203ENST00000570676 OVOS2Q6IE36 1432 aa21.29■■□□□ 1
RAB40B-203ENST00000570676 MYOM1P52179 1685 aa21.28■■□□□ 1
RAB40B-203ENST00000570676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.28■■□□□ 1
RAB40B-203ENST00000570676 ZRANB1Q9UGI0 708 aa21.28■■□□□ 1
RAB40B-203ENST00000570676 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
RAB40B-203ENST00000570676 HDGFL2Q7Z4V5 671 aaPredicted RBP21.27■■□□□ 1
RAB40B-203ENST00000570676 NME9Q86XW9 330 aa21.27■■□□□ 1
RAB40B-203ENST00000570676 RREB1Q92766 1687 aa21.27■■□□□ 1
RAB40B-203ENST00000570676 WDR17Q8IZU2 1322 aa21.27■□□□□ 0.99
RAB40B-203ENST00000570676 SOX12O15370 315 aa21.26■□□□□ 0.99
RAB40B-203ENST00000570676 SBF2Q86WG5 1849 aa21.26■□□□□ 0.99
RAB40B-203ENST00000570676 BAG6P46379 1132 aa21.24■□□□□ 0.99
RAB40B-203ENST00000570676 TERF2IPQ9NYB0 399 aa21.24■□□□□ 0.99
RAB40B-203ENST00000570676 NUP188Q5SRE5 1749 aa21.22■□□□□ 0.99
RAB40B-203ENST00000570676 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
RAB40B-203ENST00000570676 KIF20BQ96Q89 1820 aa21.22■□□□□ 0.99
RAB40B-203ENST00000570676 TOM1L2Q6ZVM7 507 aa21.21■□□□□ 0.99
RAB40B-203ENST00000570676 FAM208AQ9UK61 1670 aaKnown RBP21.21■□□□□ 0.99
RAB40B-203ENST00000570676 ANKRD36BQ8N2N9 1353 aa21.21■□□□□ 0.99
RAB40B-203ENST00000570676 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
RAB40B-203ENST00000570676 PDE3BQ13370 1112 aa21.2■□□□□ 0.98
RAB40B-203ENST00000570676 RGPD3A6NKT7 1758 aaPredicted RBP21.2■□□□□ 0.98
RAB40B-203ENST00000570676 RGPD4Q7Z3J3 1758 aa21.2■□□□□ 0.98
RAB40B-203ENST00000570676 OVOS2A0A0G2JMS6 1433 aa21.2■□□□□ 0.98
RAB40B-203ENST00000570676 EN1Q05925 392 aaPredicted RBP21.19■□□□□ 0.98
RAB40B-203ENST00000570676 LRP5O75197 1615 aa21.18■□□□□ 0.98
RAB40B-203ENST00000570676 TRIM37O94972 964 aa21.18■□□□□ 0.98
RAB40B-203ENST00000570676 CARD10Q9BWT7 1032 aa21.17■□□□□ 0.98
RAB40B-203ENST00000570676 ERBB3P21860 1342 aa21.17■□□□□ 0.98
RAB40B-203ENST00000570676 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
RAB40B-203ENST00000570676 TMF1P82094 1093 aa21.16■□□□□ 0.98
RAB40B-203ENST00000570676 TNS2Q63HR2 1409 aa21.14■□□□□ 0.98
RAB40B-203ENST00000570676 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
RAB40B-203ENST00000570676 CSB-PGBD3P0DP91 1061 aa21.14■□□□□ 0.97
RAB40B-203ENST00000570676 DDB1Q16531 1140 aa21.14■□□□□ 0.97
RAB40B-203ENST00000570676 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
RAB40B-203ENST00000570676 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
RAB40B-203ENST00000570676 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
RAB40B-203ENST00000570676 BCL9O00512 1426 aa21.12■□□□□ 0.97
RAB40B-203ENST00000570676 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
RAB40B-203ENST00000570676 NHSQ6T4R5 1651 aa21.1■□□□□ 0.97
RAB40B-203ENST00000570676 APBA3O96018 575 aa21.1■□□□□ 0.97
RAB40B-203ENST00000570676 C11orf95C9JLR9 678 aaPredicted RBP21.09■□□□□ 0.97
RAB40B-203ENST00000570676 MARCH10Q8NA82 808 aaPredicted RBP21.09■□□□□ 0.97
RAB40B-203ENST00000570676 PSDA5PKW4 1024 aaPredicted RBP21.08■□□□□ 0.97
RAB40B-203ENST00000570676 ANKRD24Q8TF21 1146 aa21.08■□□□□ 0.97
RAB40B-203ENST00000570676 COG3Q96JB2 828 aa21.08■□□□□ 0.97
RAB40B-203ENST00000570676 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
RAB40B-203ENST00000570676 CDCA8Q53HL2 280 aa21.07■□□□□ 0.96
RAB40B-203ENST00000570676 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
RAB40B-203ENST00000570676 MAP3K19Q56UN5 1328 aa21.06■□□□□ 0.96
RAB40B-203ENST00000570676 RTL1A6NKG5 1358 aa21.06■□□□□ 0.96
RAB40B-203ENST00000570676 IP6K1Q92551 441 aa21.05■□□□□ 0.96
RAB40B-203ENST00000570676 NLRP2Q9NX02 1062 aa21.05■□□□□ 0.96
RAB40B-203ENST00000570676 FYB1O15117 783 aa21.04■□□□□ 0.96
RAB40B-203ENST00000570676 FBLN1P23142 703 aa21.04■□□□□ 0.96
RAB40B-203ENST00000570676 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
RAB40B-203ENST00000570676 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
RAB40B-203ENST00000570676 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
RAB40B-203ENST00000570676 HOXC9P31274 260 aa21.02■□□□□ 0.96
RAB40B-203ENST00000570676 R3HDM1Q15032 1099 aaKnown RBP21.02■□□□□ 0.96
RAB40B-203ENST00000570676 BTAF1O14981 1849 aa21.01■□□□□ 0.95
RAB40B-203ENST00000570676 EXOC5O00471 708 aa21.01■□□□□ 0.95
RAB40B-203ENST00000570676 IL2RBP14784 551 aa21.01■□□□□ 0.95
RAB40B-203ENST00000570676 CARD14Q9BXL6 1004 aa21■□□□□ 0.95
RAB40B-203ENST00000570676 BCL11BQ9C0K0 894 aaPredicted RBP21■□□□□ 0.95
RAB40B-203ENST00000570676 DOT1LQ8TEK3 1739 aa20.98■□□□□ 0.95
RAB40B-203ENST00000570676 RRS1Q15050 365 aaKnown RBP20.98■□□□□ 0.95
RAB40B-203ENST00000570676 MEGF6O75095 1541 aa20.98■□□□□ 0.95
RAB40B-203ENST00000570676 CASZ1Q86V15 1759 aa20.97■□□□□ 0.95
RAB40B-203ENST00000570676 PLSCR1O15162 318 aa20.97■□□□□ 0.95
RAB40B-203ENST00000570676 AMPHP49418 695 aa20.97■□□□□ 0.95
RAB40B-203ENST00000570676 LTV1Q96GA3 475 aaPredicted RBP20.97■□□□□ 0.95
RAB40B-203ENST00000570676 MAP2P11137 1827 aaKnown RBP20.95■□□□□ 0.94
RAB40B-203ENST00000570676 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
RAB40B-203ENST00000570676 PAPPAQ13219 1627 aa20.95■□□□□ 0.94
RAB40B-203ENST00000570676 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.941e-6■■■■■ 29.4
RAB40B-203ENST00000570676 FLT4P35916 1363 aa20.94■□□□□ 0.94
RAB40B-203ENST00000570676 KIF24Q5T7B8 1368 aa20.94■□□□□ 0.94
RAB40B-203ENST00000570676 SRCAPQ6ZRS2 3230 aa20.93■□□□□ 0.94
RAB40B-203ENST00000570676 INSRP06213 1382 aa20.93■□□□□ 0.94
RAB40B-203ENST00000570676 SMG6Q86US8 1419 aaKnown RBP20.93■□□□□ 0.94
RAB40B-203ENST00000570676 KCNQ2O43526 872 aa20.92■□□□□ 0.94
RAB40B-203ENST00000570676 NBPF14Q5TI25 921 aa20.91■□□□□ 0.94
RAB40B-203ENST00000570676 PKD1L3Q7Z443 1732 aa20.91■□□□□ 0.94
RAB40B-203ENST00000570676 PROM2Q8N271 834 aa20.91■□□□□ 0.94
RAB40B-203ENST00000570676 ANO8Q9HCE9 1232 aaPredicted RBP20.91■□□□□ 0.94
RAB40B-203ENST00000570676 ACSBG1Q96GR2 724 aa20.9■□□□□ 0.94
RAB40B-203ENST00000570676 NCAPD2Q15021 1401 aa20.89■□□□□ 0.94
RAB40B-203ENST00000570676 KAT6BQ8WYB5 2073 aa20.89■□□□□ 0.93
RAB40B-203ENST00000570676 CGNL1Q0VF96 1302 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms