RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 COL14A1Q05707 1796 aaKnown RBP9.51□□□□□ -0.89
SMG6-204ENST00000570606 PMFBP1Q8TBY8 1022 aa9.51□□□□□ -0.89
SMG6-204ENST00000570606 CABLES1Q8TDN4 633 aa9.51□□□□□ -0.89
SMG6-204ENST00000570606 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
SMG6-204ENST00000570606 TRAK1Q9UPV9 953 aa9.51□□□□□ -0.89
SMG6-204ENST00000570606 GPRASP1Q5JY77 1395 aa9.5□□□□□ -0.89
SMG6-204ENST00000570606 BLMP54132 1417 aaPredicted RBP9.5□□□□□ -0.89
SMG6-204ENST00000570606 A0A0G2JS52 829 aa9.5□□□□□ -0.89
SMG6-204ENST00000570606 MYT1Q01538 1121 aa9.5□□□□□ -0.89
SMG6-204ENST00000570606 CRYBG1Q9Y4K1 1723 aa9.5□□□□□ -0.89
SMG6-204ENST00000570606 SOX12O15370 315 aa9.49□□□□□ -0.89
SMG6-204ENST00000570606 VPS72Q15906 364 aa9.49□□□□□ -0.89
SMG6-204ENST00000570606 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
SMG6-204ENST00000570606 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
SMG6-204ENST00000570606 DCAF11Q8TEB1 546 aa9.49□□□□□ -0.89
SMG6-204ENST00000570606 PPP1R37O75864 691 aa9.48□□□□□ -0.89
SMG6-204ENST00000570606 SF3B2Q13435 895 aaKnown RBP9.48□□□□□ -0.89
SMG6-204ENST00000570606 PHRF1Q9P1Y6 1649 aaKnown RBP9.48□□□□□ -0.89
SMG6-204ENST00000570606 TOPAZ1Q8N9V7 1692 aa9.48□□□□□ -0.89
SMG6-204ENST00000570606 ATP7BP35670 1465 aa9.47□□□□□ -0.89
SMG6-204ENST00000570606 C19orf67A6NJJ6 358 aa9.47□□□□□ -0.89
SMG6-204ENST00000570606 NLRP6P59044 892 aa9.47□□□□□ -0.89
SMG6-204ENST00000570606 NGDNQ8NEJ9 315 aaKnown RBP9.47□□□□□ -0.89
SMG6-204ENST00000570606 PRR36Q9H6K5 1346 aa9.47□□□□□ -0.89
SMG6-204ENST00000570606 RGPD1P0DJD0 1748 aa9.47□□□□□ -0.89
SMG6-204ENST00000570606 KIAA1210Q9ULL0 1709 aa9.47□□□□□ -0.89
SMG6-204ENST00000570606 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.9
SMG6-204ENST00000570606 FAM83GA6ND36 823 aa9.45□□□□□ -0.9
SMG6-204ENST00000570606 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
SMG6-204ENST00000570606 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
SMG6-204ENST00000570606 BTG4Q9NY30 223 aa9.45□□□□□ -0.9
SMG6-204ENST00000570606 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
SMG6-204ENST00000570606 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
SMG6-204ENST00000570606 MS4A3Q96HJ5 214 aa9.44□□□□□ -0.9
SMG6-204ENST00000570606 PRDM11Q9NQV5 511 aa9.44□□□□□ -0.9
SMG6-204ENST00000570606 TRPC6Q9Y210 931 aa9.44□□□□□ -0.9
SMG6-204ENST00000570606 THSD7AQ9UPZ6 1657 aa9.44□□□□□ -0.9
SMG6-204ENST00000570606 TNS1Q9HBL0 1735 aaKnown RBP9.42□□□□□ -0.9
SMG6-204ENST00000570606 QRICH2Q9H0J4 1663 aa9.42□□□□□ -0.9
SMG6-204ENST00000570606 LRP5O75197 1615 aa9.42□□□□□ -0.9
SMG6-204ENST00000570606 NRKQ7Z2Y5 1582 aa9.42□□□□□ -0.9
SMG6-204ENST00000570606 KCNV2Q8TDN2 545 aa9.42□□□□□ -0.9
SMG6-204ENST00000570606 NUDT16Q96DE0 195 aaKnown RBP9.42□□□□□ -0.9
SMG6-204ENST00000570606 MS4A4AQ96JQ5 239 aa9.42□□□□□ -0.9
SMG6-204ENST00000570606 KIAA0232Q92628 1395 aa9.41□□□□□ -0.9
SMG6-204ENST00000570606 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
SMG6-204ENST00000570606 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
SMG6-204ENST00000570606 ONECUT3O60422 494 aaPredicted RBP9.41□□□□□ -0.9
SMG6-204ENST00000570606 HRCP23327 699 aa9.41□□□□□ -0.9
SMG6-204ENST00000570606 BAG6P46379 1132 aa9.41□□□□□ -0.9
SMG6-204ENST00000570606 TMEM106CQ9BVX2 250 aa9.41□□□□□ -0.9
SMG6-204ENST00000570606 CDK19Q9BWU1 502 aa9.4□□□□□ -0.9
SMG6-204ENST00000570606 STRN4Q9NRL3 753 aa9.4□□□□□ -0.9
SMG6-204ENST00000570606 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
SMG6-204ENST00000570606 POLR3AO14802 1390 aaPredicted RBP9.39□□□□□ -0.91
SMG6-204ENST00000570606 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
SMG6-204ENST00000570606 NUTM2GQ5VZR2 741 aa9.39□□□□□ -0.91
SMG6-204ENST00000570606 ACEP12821 1306 aa9.38□□□□□ -0.91
SMG6-204ENST00000570606 ZC3H6P61129 1189 aaKnown RBP9.38□□□□□ -0.91
SMG6-204ENST00000570606 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
SMG6-204ENST00000570606 LMO7Q8WWI1 1683 aa9.38□□□□□ -0.91
SMG6-204ENST00000570606 PPIP5K1Q6PFW1 1433 aa9.38□□□□□ -0.91
SMG6-204ENST00000570606 SSH2Q76I76 1423 aa9.38□□□□□ -0.91
SMG6-204ENST00000570606 SPATA31A1Q5TZJ5 1347 aa9.37□□□□□ -0.91
SMG6-204ENST00000570606 CENPJQ9HC77 1338 aaPredicted RBP9.37□□□□□ -0.91
SMG6-204ENST00000570606 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
SMG6-204ENST00000570606 SRPK2P78362 688 aaKnown RBP9.37□□□□□ -0.91
SMG6-204ENST00000570606 DISP2A7MBM2 1401 aa9.37□□□□□ -0.91
SMG6-204ENST00000570606 TIE1P35590 1138 aa9.36□□□□□ -0.91
SMG6-204ENST00000570606 EN1Q05925 392 aaPredicted RBP9.36□□□□□ -0.91
SMG6-204ENST00000570606 NBPF8Q3BBV2 869 aa9.36□□□□□ -0.91
SMG6-204ENST00000570606 ABTB2Q8N961 1025 aa9.36□□□□□ -0.91
SMG6-204ENST00000570606 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
SMG6-204ENST00000570606 USP19O94966 1318 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 TRPM1Q7Z4N2 1603 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 EVA1CP58658 441 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 PARP4Q9UKK3 1724 aaKnown RBP9.35□□□□□ -0.91
SMG6-204ENST00000570606 RREB1Q92766 1687 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 CAMTA1Q9Y6Y1 1673 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 CPDO75976 1380 aa9.35□□□□□ -0.91
SMG6-204ENST00000570606 WNK3Q9BYP7 1800 aa9.34□□□□□ -0.91
SMG6-204ENST00000570606 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
SMG6-204ENST00000570606 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
SMG6-204ENST00000570606 PIK3C2AO00443 1686 aa9.34□□□□□ -0.91
SMG6-204ENST00000570606 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
SMG6-204ENST00000570606 NUP188Q5SRE5 1749 aa9.34□□□□□ -0.92
SMG6-204ENST00000570606 USP6P35125 1406 aa9.33□□□□□ -0.92
SMG6-204ENST00000570606 AKAP12Q02952 1782 aa9.33□□□□□ -0.92
SMG6-204ENST00000570606 TRIM37O94972 964 aa9.33□□□□□ -0.92
SMG6-204ENST00000570606 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
SMG6-204ENST00000570606 FAM196AQ6ZSG2 479 aa9.33□□□□□ -0.92
SMG6-204ENST00000570606 NLRP13Q86W25 1043 aa9.33□□□□□ -0.92
SMG6-204ENST00000570606 BRD4O60885 1362 aaPredicted RBP9.33□□□□□ -0.92
SMG6-204ENST00000570606 SLIT3O75094 1523 aa9.32□□□□□ -0.92
SMG6-204ENST00000570606 LRRC37A3O60309 1634 aa9.32□□□□□ -0.92
SMG6-204ENST00000570606 MKRN3Q13064 507 aaKnown RBP9.32□□□□□ -0.92
SMG6-204ENST00000570606 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms