RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 TONSLQ96HA7 1378 aa17.46■□□□□ 0.39
RBFOX1-218ENST00000569889 PTF1AQ7RTS3 328 aa17.46■□□□□ 0.39
RBFOX1-218ENST00000569889 NME9Q86XW9 330 aa17.46■□□□□ 0.39
RBFOX1-218ENST00000569889 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
RBFOX1-218ENST00000569889 WDR17Q8IZU2 1322 aa17.46■□□□□ 0.38
RBFOX1-218ENST00000569889 TTC21AQ8NDW8 1320 aa17.46■□□□□ 0.38
RBFOX1-218ENST00000569889 SLC12A5Q9H2X9 1139 aa17.45■□□□□ 0.38
RBFOX1-218ENST00000569889 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-218ENST00000569889 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
RBFOX1-218ENST00000569889 SBF2Q86WG5 1849 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 EXOC5O00471 708 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 NUP188Q5SRE5 1749 aa17.43■□□□□ 0.38
RBFOX1-218ENST00000569889 CARD10Q9BWT7 1032 aa17.42■□□□□ 0.38
RBFOX1-218ENST00000569889 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
RBFOX1-218ENST00000569889 LRRC37A3O60309 1634 aa17.42■□□□□ 0.38
RBFOX1-218ENST00000569889 PARD3Q8TEW0 1356 aa17.41■□□□□ 0.38
RBFOX1-218ENST00000569889 BCL11BQ9C0K0 894 aaPredicted RBP17.41■□□□□ 0.38
RBFOX1-218ENST00000569889 RREB1Q92766 1687 aa17.41■□□□□ 0.38
RBFOX1-218ENST00000569889 LTV1Q96GA3 475 aaPredicted RBP17.4■□□□□ 0.38
RBFOX1-218ENST00000569889 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
RBFOX1-218ENST00000569889 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
RBFOX1-218ENST00000569889 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-218ENST00000569889 ACSBG1Q96GR2 724 aa17.39■□□□□ 0.37
RBFOX1-218ENST00000569889 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
RBFOX1-218ENST00000569889 PEAK1Q9H792 1746 aa17.38■□□□□ 0.37
RBFOX1-218ENST00000569889 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
RBFOX1-218ENST00000569889 LTN1O94822 1766 aa17.37■□□□□ 0.37
RBFOX1-218ENST00000569889 NFAT5O94916 1531 aa17.37■□□□□ 0.37
RBFOX1-218ENST00000569889 ST20-MTHFSA0A0A6YYL1 179 aa17.36■□□□□ 0.37
RBFOX1-218ENST00000569889 KCNQ2O43526 872 aa17.36■□□□□ 0.37
RBFOX1-218ENST00000569889 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
RBFOX1-218ENST00000569889 SPON1Q9HCB6 807 aa17.36■□□□□ 0.37
RBFOX1-218ENST00000569889 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-218ENST00000569889 PLSCR1O15162 318 aa17.34■□□□□ 0.37
RBFOX1-218ENST00000569889 FBLN1P23142 703 aa17.34■□□□□ 0.37
RBFOX1-218ENST00000569889 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
RBFOX1-218ENST00000569889 PDGFDQ9GZP0 370 aaPredicted RBP17.34■□□□□ 0.37
RBFOX1-218ENST00000569889 CD163L1Q9NR16 1453 aa17.34■□□□□ 0.37
RBFOX1-218ENST00000569889 SBNO2Q9Y2G9 1366 aa17.34■□□□□ 0.37
RBFOX1-218ENST00000569889 ZBTB7AO95365 584 aa17.33■□□□□ 0.36
RBFOX1-218ENST00000569889 PROM2Q8N271 834 aa17.33■□□□□ 0.36
RBFOX1-218ENST00000569889 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
RBFOX1-218ENST00000569889 USP31Q70CQ4 1352 aa17.32■□□□□ 0.36
RBFOX1-218ENST00000569889 IL2RBP14784 551 aa17.32■□□□□ 0.36
RBFOX1-218ENST00000569889 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
RBFOX1-218ENST00000569889 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
RBFOX1-218ENST00000569889 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-218ENST00000569889 DDX54Q8TDD1 881 aaKnown RBP17.31■□□□□ 0.36
RBFOX1-218ENST00000569889 ERBB3P21860 1342 aa17.3■□□□□ 0.36
RBFOX1-218ENST00000569889 COG3Q96JB2 828 aa17.3■□□□□ 0.36
RBFOX1-218ENST00000569889 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-218ENST00000569889 DCAF8L1A6NGE4 600 aa17.29■□□□□ 0.36
RBFOX1-218ENST00000569889 AMPHP49418 695 aa17.29■□□□□ 0.36
RBFOX1-218ENST00000569889 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-218ENST00000569889 IP6K1Q92551 441 aa17.27■□□□□ 0.36
RBFOX1-218ENST00000569889 TESK2Q96S53 571 aa17.27■□□□□ 0.36
RBFOX1-218ENST00000569889 TNS2Q63HR2 1409 aa17.27■□□□□ 0.35
RBFOX1-218ENST00000569889 SYTL4Q96C24 671 aaPredicted RBP17.26■□□□□ 0.35
RBFOX1-218ENST00000569889 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
RBFOX1-218ENST00000569889 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
RBFOX1-218ENST00000569889 SLC15A2Q16348 729 aa17.25■□□□□ 0.35
RBFOX1-218ENST00000569889 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
RBFOX1-218ENST00000569889 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
RBFOX1-218ENST00000569889 USP54Q70EL1 1684 aa17.24■□□□□ 0.35
RBFOX1-218ENST00000569889 YY1P25490 414 aa17.24■□□□□ 0.35
RBFOX1-218ENST00000569889 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
RBFOX1-218ENST00000569889 MAP3K19Q56UN5 1328 aa17.23■□□□□ 0.35
RBFOX1-218ENST00000569889 TMF1P82094 1093 aa17.23■□□□□ 0.35
RBFOX1-218ENST00000569889 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
RBFOX1-218ENST00000569889 BTAF1O14981 1849 aa17.23■□□□□ 0.35
RBFOX1-218ENST00000569889 ABCC6O95255 1503 aa17.22■□□□□ 0.35
RBFOX1-218ENST00000569889 HOXC9P31274 260 aa17.22■□□□□ 0.35
RBFOX1-218ENST00000569889 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
RBFOX1-218ENST00000569889 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
RBFOX1-218ENST00000569889 PCGF6Q9BYE7 350 aa17.22■□□□□ 0.35
RBFOX1-218ENST00000569889 NHSQ6T4R5 1651 aa17.22■□□□□ 0.35
RBFOX1-218ENST00000569889 BCL9O00512 1426 aa17.21■□□□□ 0.35
RBFOX1-218ENST00000569889 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
RBFOX1-218ENST00000569889 KCNQ4P56696 695 aa17.21■□□□□ 0.35
RBFOX1-218ENST00000569889 USP47Q96K76 1375 aa17.2■□□□□ 0.34
RBFOX1-218ENST00000569889 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
RBFOX1-218ENST00000569889 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-218ENST00000569889 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
RBFOX1-218ENST00000569889 FYB1O15117 783 aa17.18■□□□□ 0.34
RBFOX1-218ENST00000569889 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
RBFOX1-218ENST00000569889 ZCRB1Q8TBF4 217 aaKnown RBP17.18■□□□□ 0.34
RBFOX1-218ENST00000569889 ANKRD36BQ8N2N9 1353 aa17.17■□□□□ 0.34
RBFOX1-218ENST00000569889 MYOM1P52179 1685 aa17.17■□□□□ 0.34
RBFOX1-218ENST00000569889 PTGER2P43116 358 aa17.17■□□□□ 0.34
RBFOX1-218ENST00000569889 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
RBFOX1-218ENST00000569889 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
RBFOX1-218ENST00000569889 PPM1GO15355 546 aaPredicted RBP17.16■□□□□ 0.34
RBFOX1-218ENST00000569889 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
RBFOX1-218ENST00000569889 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
RBFOX1-218ENST00000569889 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms