RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 NWD1Q149M9 1564 aa10.06□□□□□ -0.8
LINC00559-201ENST00000569476 CHD2O14647 1828 aaKnown RBP10.05□□□□□ -0.8
LINC00559-201ENST00000569476 RIPK4P57078 832 aa10.05□□□□□ -0.8
LINC00559-201ENST00000569476 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
LINC00559-201ENST00000569476 N4BP2Q86UW6 1770 aaPredicted RBP10.04□□□□□ -0.8
LINC00559-201ENST00000569476 U2SURPO15042 1029 aaKnown RBP10.04□□□□□ -0.8
LINC00559-201ENST00000569476 WAPLQ7Z5K2 1190 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 PLEKHG2Q9H7P9 1386 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 HTATSF1O43719 755 aaKnown RBP10.04□□□□□ -0.8
LINC00559-201ENST00000569476 C8orf34Q49A92 452 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 ATF7IPQ6VMQ6 1270 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 SBNO1A3KN83 1393 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 TNNT2P45379 298 aaPredicted RBP10.04□□□□□ -0.8
LINC00559-201ENST00000569476 SAFB2Q14151 953 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC00559-201ENST00000569476 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
LINC00559-201ENST00000569476 MARF1Q9Y4F3 1742 aaKnown RBP10.03□□□□□ -0.8
LINC00559-201ENST00000569476 PRR36Q9H6K5 1346 aa10.03□□□□□ -0.8
LINC00559-201ENST00000569476 PIK3C2AO00443 1686 aa10.03□□□□□ -0.8
LINC00559-201ENST00000569476 FTSJ3Q8IY81 847 aaKnown RBP10.02□□□□□ -0.81
LINC00559-201ENST00000569476 MST1RQ04912 1400 aa10.02□□□□□ -0.81
LINC00559-201ENST00000569476 KDRP35968 1356 aa10.02□□□□□ -0.81
LINC00559-201ENST00000569476 EXOSC9Q06265 439 aaKnown RBP10.02□□□□□ -0.81
LINC00559-201ENST00000569476 TXNDC2Q86VQ3 553 aa10.02□□□□□ -0.81
LINC00559-201ENST00000569476 SMC4Q9NTJ3 1288 aa10.02□□□□□ -0.81
LINC00559-201ENST00000569476 FLT4P35916 1363 aa10.01□□□□□ -0.81
LINC00559-201ENST00000569476 ABCC6O95255 1503 aa10.01□□□□□ -0.81
LINC00559-201ENST00000569476 PRKAR2BP31323 418 aa10.01□□□□□ -0.81
LINC00559-201ENST00000569476 API5Q9BZZ5 524 aaKnown RBP10.01□□□□□ -0.81
LINC00559-201ENST00000569476 ADGRL3Q9HAR2 1447 aa10.01□□□□□ -0.81
LINC00559-201ENST00000569476 KIF1AQ12756 1690 aa10.01□□□□□ -0.81
LINC00559-201ENST00000569476 MLECQ14165 292 aa10.01□□□□□ -0.81
LINC00559-201ENST00000569476 RRP7AQ9Y3A4 280 aaKnown RBP10.01□□□□□ -0.81
LINC00559-201ENST00000569476 COG6Q9Y2V7 657 aa10□□□□□ -0.81
LINC00559-201ENST00000569476 SMC5Q8IY18 1101 aa10□□□□□ -0.81
LINC00559-201ENST00000569476 PANK1Q8TE04 598 aa10□□□□□ -0.81
LINC00559-201ENST00000569476 ABCC4O15439 1325 aa10□□□□□ -0.81
LINC00559-201ENST00000569476 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 ACEP12821 1306 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 LTKP29376 864 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 NME9Q86XW9 330 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
LINC00559-201ENST00000569476 SSH1Q8WYL5 1049 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 GCC1Q96CN9 775 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 CAMTA1Q9Y6Y1 1673 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 IGHDP01880 384 aa9.99□□□□□ -0.81
LINC00559-201ENST00000569476 OVOS2A0A0G2JMS6 1433 aa9.98□□□□□ -0.81
LINC00559-201ENST00000569476 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
LINC00559-201ENST00000569476 TRIM27P14373 513 aa9.98□□□□□ -0.81
LINC00559-201ENST00000569476 UPF2Q9HAU5 1272 aaKnown RBP9.98□□□□□ -0.81
LINC00559-201ENST00000569476 ZBTB40Q9NUA8 1239 aa9.98□□□□□ -0.81
LINC00559-201ENST00000569476 NEUROD2Q15784 382 aa9.98□□□□□ -0.81
LINC00559-201ENST00000569476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC00559-201ENST00000569476 FRAT1Q92837 279 aaPredicted RBP9.98□□□□□ -0.81
LINC00559-201ENST00000569476 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 PTPRCP08575 1304 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 BECN1Q14457 450 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 PXDNLA1KZ92 1463 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 NCOA3Q9Y6Q9 1424 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 VAMP4O75379 141 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 IL27Q8NEV9 243 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 AMOTL2Q9Y2J4 779 aa9.97□□□□□ -0.81
LINC00559-201ENST00000569476 RLBP1P12271 317 aa9.96□□□□□ -0.81
LINC00559-201ENST00000569476 NOB1Q9ULX3 412 aaKnown RBP9.96□□□□□ -0.82
LINC00559-201ENST00000569476 PCDHB15Q9Y5E8 787 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 EMILIN1Q9Y6C2 1016 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 SLIT3O75094 1523 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 IGSF1Q8N6C5 1336 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 CRB1P82279 1406 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 GAS2L2Q8NHY3 880 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 PDZRN3Q9UPQ7 1066 aa9.96□□□□□ -0.82
LINC00559-201ENST00000569476 NCAPD2Q15021 1401 aa9.95□□□□□ -0.82
LINC00559-201ENST00000569476 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
LINC00559-201ENST00000569476 MED1Q15648 1581 aaPredicted RBP9.95□□□□□ -0.82
LINC00559-201ENST00000569476 EIF4A2Q14240 407 aaKnown RBP9.95□□□□□ -0.82
LINC00559-201ENST00000569476 DAXXQ9UER7 740 aaPredicted RBP9.95□□□□□ -0.82
LINC00559-201ENST00000569476 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
LINC00559-201ENST00000569476 CHL1O00533 1208 aa9.95□□□□□ -0.82
LINC00559-201ENST00000569476 TSR2Q969E8 191 aaKnown RBP9.94□□□□□ -0.82
LINC00559-201ENST00000569476 FAM208AQ9UK61 1670 aaKnown RBP9.94□□□□□ -0.82
LINC00559-201ENST00000569476 NFAT5O94916 1531 aa9.94□□□□□ -0.82
LINC00559-201ENST00000569476 LMO7Q8WWI1 1683 aa9.94□□□□□ -0.82
LINC00559-201ENST00000569476 IBTKQ9P2D0 1353 aaPredicted RBP9.94□□□□□ -0.82
LINC00559-201ENST00000569476 NUCB1Q02818 461 aa9.94□□□□□ -0.82
LINC00559-201ENST00000569476 RGPD8O14715 1765 aaPredicted RBP9.93□□□□□ -0.82
LINC00559-201ENST00000569476 INTS3Q68E01 1043 aaKnown RBP9.93□□□□□ -0.82
LINC00559-201ENST00000569476 MBIPQ9NS73 344 aa9.93□□□□□ -0.82
LINC00559-201ENST00000569476 ITPRIPQ8IWB1 547 aa9.93□□□□□ -0.82
LINC00559-201ENST00000569476 TWISTNBQ3B726 338 aaPredicted RBP9.92□□□□□ -0.82
LINC00559-201ENST00000569476 TMEM57Q8N5G2 664 aa9.92□□□□□ -0.82
LINC00559-201ENST00000569476 PAK3O75914 559 aaPredicted RBP9.92□□□□□ -0.82
LINC00559-201ENST00000569476 PHACTR3Q96KR7 559 aa9.92□□□□□ -0.82
LINC00559-201ENST00000569476 DCCP43146 1447 aa9.92□□□□□ -0.82
LINC00559-201ENST00000569476 ANKLE2Q86XL3 938 aa9.92□□□□□ -0.82
LINC00559-201ENST00000569476 TBC1D32Q96NH3 1257 aa9.92□□□□□ -0.82
LINC00559-201ENST00000569476 ZBTB7BO15156 539 aaPredicted RBP9.91□□□□□ -0.82
LINC00559-201ENST00000569476 LTN1O94822 1766 aa9.91□□□□□ -0.82
LINC00559-201ENST00000569476 ADAMTS7Q9UKP4 1686 aa9.91□□□□□ -0.82
LINC00559-201ENST00000569476 TRPM3Q9HCF6 1732 aaPredicted RBP9.91□□□□□ -0.82
LINC00559-201ENST00000569476 USP19O94966 1318 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms