RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 WDR17Q8IZU2 1322 aa22.68■■□□□ 1.22
EPB42-208ENST00000569204 SOX12O15370 315 aa22.68■■□□□ 1.22
EPB42-208ENST00000569204 LRRC37A3O60309 1634 aa22.68■■□□□ 1.22
EPB42-208ENST00000569204 NFAT5O94916 1531 aa22.67■■□□□ 1.22
EPB42-208ENST00000569204 PARD3Q8TEW0 1356 aa22.67■■□□□ 1.22
EPB42-208ENST00000569204 USP54Q70EL1 1684 aa22.67■■□□□ 1.22
EPB42-208ENST00000569204 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
EPB42-208ENST00000569204 RREB1Q92766 1687 aa22.66■■□□□ 1.22
EPB42-208ENST00000569204 PEAK1Q9H792 1746 aa22.65■■□□□ 1.22
EPB42-208ENST00000569204 C11orf95C9JLR9 678 aaPredicted RBP22.65■■□□□ 1.22
EPB42-208ENST00000569204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.65■■□□□ 1.22
EPB42-208ENST00000569204 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
EPB42-208ENST00000569204 SBF2Q86WG5 1849 aa22.64■■□□□ 1.22
EPB42-208ENST00000569204 R3HDM1Q15032 1099 aaKnown RBP22.64■■□□□ 1.21
EPB42-208ENST00000569204 USP31Q70CQ4 1352 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 ABCC6O95255 1503 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 DDB1Q16531 1140 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 OVOS2A0A0G2JMS6 1433 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 OVOS2A0A0J9YW53 1432 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 OVOS2Q6IE36 1432 aa22.63■■□□□ 1.21
EPB42-208ENST00000569204 NUP188Q5SRE5 1749 aa22.62■■□□□ 1.21
EPB42-208ENST00000569204 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
EPB42-208ENST00000569204 PUS7Q96PZ0 661 aaKnown RBP22.62■■□□□ 1.21
EPB42-208ENST00000569204 LTN1O94822 1766 aa22.61■■□□□ 1.21
EPB42-208ENST00000569204 CSB-PGBD3P0DP91 1061 aa22.61■■□□□ 1.21
EPB42-208ENST00000569204 NME9Q86XW9 330 aa22.61■■□□□ 1.21
EPB42-208ENST00000569204 CDCA7Q9BWT1 371 aaPredicted RBP22.61■■□□□ 1.21
EPB42-208ENST00000569204 CARD10Q9BWT7 1032 aa22.61■■□□□ 1.21
EPB42-208ENST00000569204 EDC4Q6P2E9 1401 aaKnown RBP22.59■■□□□ 1.21
EPB42-208ENST00000569204 TERF2IPQ9NYB0 399 aa22.58■■□□□ 1.21
EPB42-208ENST00000569204 TESK2Q96S53 571 aa22.57■■□□□ 1.2
EPB42-208ENST00000569204 A0A1W2PP64 1363 aa22.57■■□□□ 1.2
EPB42-208ENST00000569204 RGPD3A6NKT7 1758 aaPredicted RBP22.56■■□□□ 1.2
EPB42-208ENST00000569204 RGPD4Q7Z3J3 1758 aa22.56■■□□□ 1.2
EPB42-208ENST00000569204 CCDC7Q96M83 1385 aa22.56■■□□□ 1.2
EPB42-208ENST00000569204 ST20-MTHFSA0A0A6YYL1 179 aa22.56■■□□□ 1.2
EPB42-208ENST00000569204 MARCH10Q8NA82 808 aaPredicted RBP22.55■■□□□ 1.2
EPB42-208ENST00000569204 NBPF14Q5TI25 921 aa22.54■■□□□ 1.2
EPB42-208ENST00000569204 NINLQ9Y2I6 1382 aa22.53■■□□□ 1.2
EPB42-208ENST00000569204 SLC24A1O60721 1099 aa22.53■■□□□ 1.2
EPB42-208ENST00000569204 BCL9O00512 1426 aa22.53■■□□□ 1.2
EPB42-208ENST00000569204 BCL11BQ9C0K0 894 aaPredicted RBP22.52■■□□□ 1.2
EPB42-208ENST00000569204 ERBB3P21860 1342 aa22.52■■□□□ 1.2
EPB42-208ENST00000569204 EXOC5O00471 708 aa22.51■■□□□ 1.19
EPB42-208ENST00000569204 PLSCR1O15162 318 aa22.51■■□□□ 1.19
EPB42-208ENST00000569204 PTF1AQ7RTS3 328 aa22.49■■□□□ 1.19
EPB42-208ENST00000569204 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
EPB42-208ENST00000569204 NLRP2Q9NX02 1062 aa22.48■■□□□ 1.19
EPB42-208ENST00000569204 ANKRD24Q8TF21 1146 aa22.47■■□□□ 1.19
EPB42-208ENST00000569204 USP47Q96K76 1375 aa22.45■■□□□ 1.18
EPB42-208ENST00000569204 IL2RBP14784 551 aa22.44■■□□□ 1.18
EPB42-208ENST00000569204 ANKRD36BQ8N2N9 1353 aa22.44■■□□□ 1.18
EPB42-208ENST00000569204 PCGF6Q9BYE7 350 aa22.44■■□□□ 1.18
EPB42-208ENST00000569204 FAM208AQ9UK61 1670 aaKnown RBP22.44■■□□□ 1.18
EPB42-208ENST00000569204 TMF1P82094 1093 aa22.43■■□□□ 1.18
EPB42-208ENST00000569204 IP6K1Q92551 441 aa22.43■■□□□ 1.18
EPB42-208ENST00000569204 COG3Q96JB2 828 aa22.43■■□□□ 1.18
EPB42-208ENST00000569204 NHSQ6T4R5 1651 aa22.42■■□□□ 1.18
EPB42-208ENST00000569204 PROM2Q8N271 834 aa22.42■■□□□ 1.18
EPB42-208ENST00000569204 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
EPB42-208ENST00000569204 KCNQ2O43526 872 aa22.39■■□□□ 1.17
EPB42-208ENST00000569204 ANO8Q9HCE9 1232 aaPredicted RBP22.39■■□□□ 1.17
EPB42-208ENST00000569204 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
EPB42-208ENST00000569204 LTV1Q96GA3 475 aaPredicted RBP22.38■■□□□ 1.17
EPB42-208ENST00000569204 CASZ1Q86V15 1759 aa22.38■■□□□ 1.17
EPB42-208ENST00000569204 TXNRD1Q16881 649 aa22.37■■□□□ 1.17
EPB42-208ENST00000569204 ACSBG1Q96GR2 724 aa22.37■■□□□ 1.17
EPB42-208ENST00000569204 SPON1Q9HCB6 807 aa22.37■■□□□ 1.17
EPB42-208ENST00000569204 RGPD2P0DJD1 1756 aa22.37■■□□□ 1.17
EPB42-208ENST00000569204 FBLN1P23142 703 aa22.36■■□□□ 1.17
EPB42-208ENST00000569204 HOXC9P31274 260 aa22.36■■□□□ 1.17
EPB42-208ENST00000569204 AMPHP49418 695 aa22.36■■□□□ 1.17
EPB42-208ENST00000569204 BTAF1O14981 1849 aa22.36■■□□□ 1.17
EPB42-208ENST00000569204 CDCA8Q53HL2 280 aa22.35■■□□□ 1.17
EPB42-208ENST00000569204 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
EPB42-208ENST00000569204 KIF20BQ96Q89 1820 aa22.35■■□□□ 1.17
EPB42-208ENST00000569204 FYB1O15117 783 aa22.34■■□□□ 1.17
EPB42-208ENST00000569204 GGNBP2Q9H3C7 697 aa22.33■■□□□ 1.17
EPB42-208ENST00000569204 RTL1A6NKG5 1358 aa22.32■■□□□ 1.16
EPB42-208ENST00000569204 MYOM1P52179 1685 aa22.32■■□□□ 1.16
EPB42-208ENST00000569204 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
EPB42-208ENST00000569204 STK32BQ9NY57 414 aa22.31■■□□□ 1.16
EPB42-208ENST00000569204 PPP1R1BQ9UD71 204 aaPredicted RBP22.31■■□□□ 1.16
EPB42-208ENST00000569204 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
EPB42-208ENST00000569204 PDGFDQ9GZP0 370 aaPredicted RBP22.3■■□□□ 1.16
EPB42-208ENST00000569204 SLC15A2Q16348 729 aa22.29■■□□□ 1.16
EPB42-208ENST00000569204 DDX54Q8TDD1 881 aaKnown RBP22.29■■□□□ 1.16
EPB42-208ENST00000569204 SHANK3Q9BYB0 1731 aa22.28■■□□□ 1.16
EPB42-208ENST00000569204 PAPPAQ13219 1627 aa22.27■■□□□ 1.16
EPB42-208ENST00000569204 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
EPB42-208ENST00000569204 ZBTB7AO95365 584 aa22.25■■□□□ 1.15
EPB42-208ENST00000569204 MEGF6O75095 1541 aa22.25■■□□□ 1.15
EPB42-208ENST00000569204 NBPF6Q5VWK0 638 aa22.24■■□□□ 1.15
EPB42-208ENST00000569204 ZCRB1Q8TBF4 217 aaKnown RBP22.24■■□□□ 1.15
EPB42-208ENST00000569204 NBPF4Q96M43 638 aa22.24■■□□□ 1.15
EPB42-208ENST00000569204 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
EPB42-208ENST00000569204 SMG6Q86US8 1419 aaKnown RBP22.23■■□□□ 1.15
EPB42-208ENST00000569204 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
EPB42-208ENST00000569204 INSRP06213 1382 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms