RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DZIP3Q86Y13 1208 aaKnown RBP7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 CRIPAKQ8N1N5 446 aa7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 CLUAP1Q96AJ1 413 aa7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 PRM3Q9NNZ6 103 aa7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 PCDHB9Q9Y5E1 797 aa7.05□□□□□ -1.28
HMGB1P6-201ENST00000569046 TIMP2P16035 220 aa7.04□□□□□ -1.28
HMGB1P6-201ENST00000569046 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P6-201ENST00000569046 INTS6LQ5JSJ4 861 aaKnown RBP7.04□□□□□ -1.28
HMGB1P6-201ENST00000569046 AXIN1O15169 862 aa7.03□□□□□ -1.28
HMGB1P6-201ENST00000569046 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
HMGB1P6-201ENST00000569046 ITPKCQ96DU7 683 aa7.03□□□□□ -1.28
HMGB1P6-201ENST00000569046 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
HMGB1P6-201ENST00000569046 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
HMGB1P6-201ENST00000569046 ESPNB1AK53 854 aa7.02□□□□□ -1.29
HMGB1P6-201ENST00000569046 GIGYF1O75420 1035 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P6-201ENST00000569046 WDR4P57081 412 aaKnown RBP7.02□□□□□ -1.29
HMGB1P6-201ENST00000569046 RAB15P59190 212 aa7.02□□□□□ -1.29
HMGB1P6-201ENST00000569046 CAPN5O15484 640 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P6-201ENST00000569046 ZIC2O95409 532 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P6-201ENST00000569046 NBPF20Q3BBV1 942 aa7.01□□□□□ -1.29
HMGB1P6-201ENST00000569046 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P6-201ENST00000569046 CCDC116Q8IYX3 515 aa7.01□□□□□ -1.29
HMGB1P6-201ENST00000569046 GTF3C3Q9Y5Q9 886 aa7.01□□□□□ -1.29
HMGB1P6-201ENST00000569046 POTECB2RU33 542 aa7□□□□□ -1.29
HMGB1P6-201ENST00000569046 RAD21O60216 631 aa7□□□□□ -1.29
HMGB1P6-201ENST00000569046 TMPRSS4Q9NRS4 437 aa7□□□□□ -1.29
HMGB1P6-201ENST00000569046 POM121CA8CG34 1229 aa6.99□□□□□ -1.29
HMGB1P6-201ENST00000569046 BMP1P13497 986 aa6.99□□□□□ -1.29
HMGB1P6-201ENST00000569046 WASHC4Q2M389 1173 aa6.99□□□□□ -1.29
HMGB1P6-201ENST00000569046 FNBP4Q8N3X1 1017 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P6-201ENST00000569046 CEP126Q9P2H0 1117 aa6.99□□□□□ -1.29
HMGB1P6-201ENST00000569046 ZNF330Q9Y3S2 320 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P6-201ENST00000569046 ERVH48-1M5A8F1 160 aa6.98□□□□□ -1.29
HMGB1P6-201ENST00000569046 EIF4G2P78344 907 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGB1P6-201ENST00000569046 TRIM46Q7Z4K8 759 aa6.98□□□□□ -1.29
HMGB1P6-201ENST00000569046 ATP13A2Q9NQ11 1180 aa6.98□□□□□ -1.29
HMGB1P6-201ENST00000569046 EMILIN1Q9Y6C2 1016 aa6.98□□□□□ -1.29
HMGB1P6-201ENST00000569046 MCCD1P59942 119 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P6-201ENST00000569046 CBLBQ13191 982 aa6.97□□□□□ -1.29
HMGB1P6-201ENST00000569046 ZNF784Q8NCA9 323 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P6-201ENST00000569046 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
HMGB1P6-201ENST00000569046 LILRA1O75019 489 aa6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 DHX9Q08211 1270 aaKnown RBP6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 TSGA10IPQ3SY00 556 aa6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 PROSER2Q86WR7 435 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 SEPT12Q8IYM1 358 aa6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 PHTF2Q8N3S3 785 aa6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 CCDC85AQ96PX6 553 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 GMPR2Q9P2T1 348 aaKnown RBP6.96□□□□□ -1.3
HMGB1P6-201ENST00000569046 A6NJR5 290 aa6.95□□□□□ -1.3
HMGB1P6-201ENST00000569046 ADD1P35611 737 aaKnown RBP6.95□□□□□ -1.3
HMGB1P6-201ENST00000569046 MEIOBQ8N635 442 aa6.95□□□□□ -1.3
HMGB1P6-201ENST00000569046 ALG2Q9H553 416 aa6.95□□□□□ -1.3
HMGB1P6-201ENST00000569046 PGPEP1Q9NXJ5 209 aa6.95□□□□□ -1.3
HMGB1P6-201ENST00000569046 SCTRP47872 440 aa6.94□□□□□ -1.3
HMGB1P6-201ENST00000569046 MRPL14Q6P1L8 145 aaKnown RBP6.94□□□□□ -1.3
HMGB1P6-201ENST00000569046 Q6ZVU0 165 aa6.94□□□□□ -1.3
HMGB1P6-201ENST00000569046 ZNF592Q92610 1267 aa6.94□□□□□ -1.3
HMGB1P6-201ENST00000569046 CDCA7Q9BWT1 371 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P6-201ENST00000569046 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
HMGB1P6-201ENST00000569046 PIK3CDO00329 1044 aa6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 SOX11P35716 441 aa6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 SEMA3FQ13275 785 aa6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 KDF1Q8NAX2 398 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
HMGB1P6-201ENST00000569046 ZNF787Q6DD87 383 aa6.92□□□□□ -1.3
HMGB1P6-201ENST00000569046 AGBL1Q96MI9 1066 aa6.92□□□□□ -1.3
HMGB1P6-201ENST00000569046 PURBQ96QR8 312 aaKnown RBP6.92□□□□□ -1.3
HMGB1P6-201ENST00000569046 CHIC2Q9UKJ5 165 aa6.92□□□□□ -1.3
HMGB1P6-201ENST00000569046 PCDHB11Q9Y5F2 797 aa6.92□□□□□ -1.3
HMGB1P6-201ENST00000569046 SNRPBP14678 240 aaKnown RBP6.91□□□□□ -1.3
HMGB1P6-201ENST00000569046 ERVK-9P63128 1117 aa6.91□□□□□ -1.3
HMGB1P6-201ENST00000569046 SLFNL1Q499Z3 407 aa6.91□□□□□ -1.3
HMGB1P6-201ENST00000569046 C6orf118Q5T5N4 469 aa6.91□□□□□ -1.3
HMGB1P6-201ENST00000569046 HDGFL1Q5TGJ6 251 aa6.91□□□□□ -1.3
HMGB1P6-201ENST00000569046 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
HMGB1P6-201ENST00000569046 C11orf95C9JLR9 678 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P6-201ENST00000569046 RELBQ01201 579 aa6.9□□□□□ -1.3
HMGB1P6-201ENST00000569046 RNF135Q8IUD6 432 aa6.9□□□□□ -1.3
HMGB1P6-201ENST00000569046 TRIM47Q96LD4 638 aa6.9□□□□□ -1.3
HMGB1P6-201ENST00000569046 TRAK2O60296 914 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 ADH1AP07327 375 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 BMP2P12643 396 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 CC2D2BQ6DHV5 1058 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 CCDC125Q86Z20 511 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 UCN2Q96RP3 112 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 TSEN34Q9BSV6 310 aaKnown RBP6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 OSBPL3Q9H4L5 887 aa6.89□□□□□ -1.31
HMGB1P6-201ENST00000569046 SCARF1Q14162 830 aa6.88□□□□□ -1.31
HMGB1P6-201ENST00000569046 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
HMGB1P6-201ENST00000569046 GLMNQ92990 594 aa6.88□□□□□ -1.31
HMGB1P6-201ENST00000569046 ZMYND15Q9H091 742 aa6.88□□□□□ -1.31
HMGB1P6-201ENST00000569046 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P6-201ENST00000569046 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
HMGB1P6-201ENST00000569046 SOBPA7XYQ1 873 aa6.87□□□□□ -1.31
HMGB1P6-201ENST00000569046 ZNF777Q9ULD5 760 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P6-201ENST00000569046 DOLKQ9UPQ8 538 aa6.87□□□□□ -1.31
HMGB1P6-201ENST00000569046 SPINT1O43278 529 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms