RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 POLKQ9UBT6 870 aa20.55■□□□□ 0.88
VAC14-211ENST00000568886 SOX12O15370 315 aa20.54■□□□□ 0.88
VAC14-211ENST00000568886 PLEKHG5O94827 1062 aa20.54■□□□□ 0.88
VAC14-211ENST00000568886 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
VAC14-211ENST00000568886 FLT4P35916 1363 aa20.54■□□□□ 0.88
VAC14-211ENST00000568886 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
VAC14-211ENST00000568886 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
VAC14-211ENST00000568886 CDK12Q9NYV4 1490 aaPredicted RBP20.53■□□□□ 0.88
VAC14-211ENST00000568886 SLIT2O94813 1529 aa20.53■□□□□ 0.88
VAC14-211ENST00000568886 NWD2Q9ULI1 1742 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 FAM83GA6ND36 823 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 ADAMTS2O95450 1211 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 PPP2R1AP30153 589 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 TNNT2P45379 298 aaPredicted RBP20.52■□□□□ 0.88
VAC14-211ENST00000568886 RRS1Q15050 365 aaKnown RBP20.52■□□□□ 0.88
VAC14-211ENST00000568886 IP6K1Q92551 441 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.88
VAC14-211ENST00000568886 INSRP06213 1382 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.88
VAC14-211ENST00000568886 PEAK1Q9H792 1746 aa20.52■□□□□ 0.87
VAC14-211ENST00000568886 FBLN1P23142 703 aa20.51■□□□□ 0.87
VAC14-211ENST00000568886 IRX6P78412 446 aaPredicted RBP20.51■□□□□ 0.87
VAC14-211ENST00000568886 EMILIN1Q9Y6C2 1016 aa20.51■□□□□ 0.87
VAC14-211ENST00000568886 PLCH1Q4KWH8 1693 aa20.5■□□□□ 0.87
VAC14-211ENST00000568886 HOXC9P31274 260 aa20.5■□□□□ 0.87
VAC14-211ENST00000568886 AMPHP49418 695 aa20.5■□□□□ 0.87
VAC14-211ENST00000568886 MEX3CQ5U5Q3 659 aaKnown RBP20.5■□□□□ 0.87
VAC14-211ENST00000568886 FNBP4Q8N3X1 1017 aaPredicted RBP20.5■□□□□ 0.87
VAC14-211ENST00000568886 CNGB1Q14028 1251 aaPredicted RBP20.49■□□□□ 0.87
VAC14-211ENST00000568886 CAMTA1Q9Y6Y1 1673 aa20.49■□□□□ 0.87
VAC14-211ENST00000568886 CHRNA2Q15822 529 aa20.48■□□□□ 0.87
VAC14-211ENST00000568886 MTHFSP49914 203 aa20.48■□□□□ 0.87
VAC14-211ENST00000568886 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
VAC14-211ENST00000568886 NRAPQ86VF7 1730 aa20.47■□□□□ 0.87
VAC14-211ENST00000568886 COL5A2P05997 1499 aaPredicted RBP20.47■□□□□ 0.87
VAC14-211ENST00000568886 NGLY1Q96IV0 654 aa20.46■□□□□ 0.87
VAC14-211ENST00000568886 C8orf37Q96NL8 207 aa20.46■□□□□ 0.87
VAC14-211ENST00000568886 AXIN2Q9Y2T1 843 aa20.45■□□□□ 0.86
VAC14-211ENST00000568886 FANCIQ9NVI1 1328 aa20.45■□□□□ 0.86
VAC14-211ENST00000568886 ZBTB7CA1YPR0 619 aa20.45■□□□□ 0.86
VAC14-211ENST00000568886 BTG4Q9NY30 223 aa20.45■□□□□ 0.86
VAC14-211ENST00000568886 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
VAC14-211ENST00000568886 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
VAC14-211ENST00000568886 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
VAC14-211ENST00000568886 ERBB3P21860 1342 aa20.44■□□□□ 0.86
VAC14-211ENST00000568886 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
VAC14-211ENST00000568886 PPM1GO15355 546 aaPredicted RBP20.43■□□□□ 0.86
VAC14-211ENST00000568886 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
VAC14-211ENST00000568886 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
VAC14-211ENST00000568886 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
VAC14-211ENST00000568886 AFF2P51816 1311 aa20.42■□□□□ 0.86
VAC14-211ENST00000568886 WDR17Q8IZU2 1322 aa20.41■□□□□ 0.86
VAC14-211ENST00000568886 ANKRD24Q8TF21 1146 aa20.41■□□□□ 0.86
VAC14-211ENST00000568886 USP21Q9UK80 565 aa20.4■□□□□ 0.86
VAC14-211ENST00000568886 ZNF772Q68DY9 489 aaPredicted RBP20.39■□□□□ 0.85
VAC14-211ENST00000568886 CRB1P82279 1406 aa20.39■□□□□ 0.85
VAC14-211ENST00000568886 EVA1CP58658 441 aa20.38■□□□□ 0.85
VAC14-211ENST00000568886 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
VAC14-211ENST00000568886 VPS72Q15906 364 aa20.38■□□□□ 0.85
VAC14-211ENST00000568886 ATRNO75882 1429 aa20.38■□□□□ 0.85
VAC14-211ENST00000568886 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
VAC14-211ENST00000568886 DIAPH1O60610 1272 aaKnown RBP20.38■□□□□ 0.85
VAC14-211ENST00000568886 IL13P35225 146 aa20.37■□□□□ 0.85
VAC14-211ENST00000568886 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
VAC14-211ENST00000568886 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
VAC14-211ENST00000568886 TRPC5Q9UL62 973 aaPredicted RBP20.35■□□□□ 0.85
VAC14-211ENST00000568886 CSB-PGBD3P0DP91 1061 aa20.35■□□□□ 0.85
VAC14-211ENST00000568886 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
VAC14-211ENST00000568886 STRN4Q9NRL3 753 aa20.35■□□□□ 0.85
VAC14-211ENST00000568886 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
VAC14-211ENST00000568886 MSH5O43196 834 aa20.34■□□□□ 0.85
VAC14-211ENST00000568886 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
VAC14-211ENST00000568886 SPATA31A5Q5VU36 1347 aa20.34■□□□□ 0.85
VAC14-211ENST00000568886 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
VAC14-211ENST00000568886 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
VAC14-211ENST00000568886 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
VAC14-211ENST00000568886 PLEKHG2Q9H7P9 1386 aa20.33■□□□□ 0.85
VAC14-211ENST00000568886 THRAP3Q9Y2W1 955 aaKnown RBP20.33■□□□□ 0.85
VAC14-211ENST00000568886 SPATA31A1Q5TZJ5 1347 aa20.32■□□□□ 0.84
VAC14-211ENST00000568886 TOM1L2Q6ZVM7 507 aa20.32■□□□□ 0.84
VAC14-211ENST00000568886 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
VAC14-211ENST00000568886 EYA1Q99502 592 aa20.31■□□□□ 0.84
VAC14-211ENST00000568886 KDRP35968 1356 aa20.31■□□□□ 0.84
VAC14-211ENST00000568886 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
VAC14-211ENST00000568886 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
VAC14-211ENST00000568886 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
VAC14-211ENST00000568886 NLRP2Q9NX02 1062 aa20.31■□□□□ 0.84
VAC14-211ENST00000568886 B4GALNT3Q6L9W6 998 aa20.3■□□□□ 0.84
VAC14-211ENST00000568886 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
VAC14-211ENST00000568886 RGS17Q9UGC6 210 aaPredicted RBP20.29■□□□□ 0.84
VAC14-211ENST00000568886 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
VAC14-211ENST00000568886 TCP11L2Q8N4U5 519 aa20.29■□□□□ 0.84
VAC14-211ENST00000568886 GJD4Q96KN9 370 aaPredicted RBP20.29■□□□□ 0.84
VAC14-211ENST00000568886 RGPD2P0DJD1 1756 aa20.29■□□□□ 0.84
VAC14-211ENST00000568886 GLI3P10071 1580 aa20.28■□□□□ 0.84
VAC14-211ENST00000568886 CDCA7Q9BWT1 371 aaPredicted RBP20.27■□□□□ 0.84
VAC14-211ENST00000568886 DISP2A7MBM2 1401 aa20.27■□□□□ 0.83
VAC14-211ENST00000568886 WNK3Q9BYP7 1800 aa20.26■□□□□ 0.83
VAC14-211ENST00000568886 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
VAC14-211ENST00000568886 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms