RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 NUTM2GQ5VZR2 741 aa6.65□□□□□ -1.34
HERPUD1-213ENST00000568358 ACEP12821 1306 aa6.65□□□□□ -1.35
HERPUD1-213ENST00000568358 CENPJQ9HC77 1338 aaPredicted RBP6.65□□□□□ -1.35
HERPUD1-213ENST00000568358 TRPM3Q9HCF6 1732 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 COL14A1Q05707 1796 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 PLEKHG3A1L390 1219 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 ZC3H6P61129 1189 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 NLRP13Q86W25 1043 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 KLHL34Q8N239 644 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 L3MBTL2Q969R5 705 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 EVC2Q86UK5 1308 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 BLMP54132 1417 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 ALS2Q96Q42 1657 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 ABCA3Q99758 1704 aa6.64□□□□□ -1.35
HERPUD1-213ENST00000568358 GLI3P10071 1580 aa6.63□□□□□ -1.35
HERPUD1-213ENST00000568358 ATP7BP35670 1465 aa6.63□□□□□ -1.35
HERPUD1-213ENST00000568358 BAG6P46379 1132 aa6.63□□□□□ -1.35
HERPUD1-213ENST00000568358 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
HERPUD1-213ENST00000568358 SIN3AQ96ST3 1273 aa6.63□□□□□ -1.35
HERPUD1-213ENST00000568358 CABP2Q9NPB3 220 aa6.63□□□□□ -1.35
HERPUD1-213ENST00000568358 POLR3AO14802 1390 aaPredicted RBP6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 ROCK2O75116 1388 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 SPATA31A5Q5VU36 1347 aa6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 SPATA31A7Q8IWB4 1347 aa6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 PDE3BQ13370 1112 aa6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 CHRNA2Q15822 529 aa6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 CABP1Q9NZU7 370 aa6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 USP35Q9P2H5 1018 aa6.62□□□□□ -1.35
HERPUD1-213ENST00000568358 PPIP5K1Q6PFW1 1433 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 BRD4O60885 1362 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 KIAA0232Q92628 1395 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 ZBTB7CA1YPR0 619 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 GCP02774 474 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 BRPF1P55201 1214 aaPredicted RBP6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 NLRP6P59044 892 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 NPM2Q86SE8 214 aaKnown RBP6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 HS6ST3Q8IZP7 471 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 QRICH2Q9H0J4 1663 aa6.61□□□□□ -1.35
HERPUD1-213ENST00000568358 SPATA31A1Q5TZJ5 1347 aa6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 NRAPQ86VF7 1730 aa6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 C11orf95C9JLR9 678 aaPredicted RBP6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 DEFB132Q7Z7B7 95 aa6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 TCP11L2Q8N4U5 519 aa6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 CREBZFQ9NS37 354 aa6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 THRAP3Q9Y2W1 955 aaKnown RBP6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 KAT6BQ8WYB5 2073 aa6.6□□□□□ -1.35
HERPUD1-213ENST00000568358 TOPAZ1Q8N9V7 1692 aa6.59□□□□□ -1.35
HERPUD1-213ENST00000568358 BARGINQ6ZT62 677 aa6.59□□□□□ -1.35
HERPUD1-213ENST00000568358 KCNH5Q8NCM2 988 aa6.59□□□□□ -1.35
HERPUD1-213ENST00000568358 CARD11Q9BXL7 1154 aa6.59□□□□□ -1.35
HERPUD1-213ENST00000568358 CRYBG1Q9Y4K1 1723 aa6.59□□□□□ -1.36
HERPUD1-213ENST00000568358 TONSLQ96HA7 1378 aa6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 PHRF1Q9P1Y6 1649 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 EP400Q96L91 3159 aa6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 TRIM37O94972 964 aa6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 EN1Q05925 392 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 FAM182BQ5T319 152 aa6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 LARP1Q6PKG0 1096 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 RGPD1P0DJD0 1748 aa6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 TRPM1Q7Z4N2 1603 aa6.58□□□□□ -1.36
HERPUD1-213ENST00000568358 CPDO75976 1380 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 USP19O94966 1318 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 APBA3O96018 575 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 CSB-PGBD3P0DP91 1061 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 TOM1L2Q6ZVM7 507 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 HDGFL2Q7Z4V5 671 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 TMC1Q8TDI8 760 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 USP6P35125 1406 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 SSH2Q76I76 1423 aa6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 KTN1Q86UP2 1357 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-213ENST00000568358 TTC21AQ8NDW8 1320 aa6.56□□□□□ -1.36
HERPUD1-213ENST00000568358 SOX12O15370 315 aa6.56□□□□□ -1.36
HERPUD1-213ENST00000568358 NBPF14Q5TI25 921 aa6.56□□□□□ -1.36
HERPUD1-213ENST00000568358 CDCA7Q9BWT1 371 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-213ENST00000568358 TERF2IPQ9NYB0 399 aa6.56□□□□□ -1.36
HERPUD1-213ENST00000568358 AATKQ6ZMQ8 1374 aa6.56□□□□□ -1.36
HERPUD1-213ENST00000568358 CAMTA1Q9Y6Y1 1673 aa6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 TTC21BQ7Z4L5 1316 aa6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 PSDA5PKW4 1024 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 EZH2Q15910 746 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 DDB1Q16531 1140 aa6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 ZNF579Q8NAF0 562 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 CRB1P82279 1406 aa6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 THSD7AQ9UPZ6 1657 aa6.55□□□□□ -1.36
HERPUD1-213ENST00000568358 AKAP12Q02952 1782 aa6.54□□□□□ -1.36
HERPUD1-213ENST00000568358 NRKQ7Z2Y5 1582 aa6.54□□□□□ -1.36
HERPUD1-213ENST00000568358 EXOC5O00471 708 aa6.54□□□□□ -1.36
HERPUD1-213ENST00000568358 R3HDM1Q15032 1099 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-213ENST00000568358 PARD3Q8TEW0 1356 aa6.54□□□□□ -1.36
HERPUD1-213ENST00000568358 RGPD5Q99666 1765 aa6.54□□□□□ -1.36
HERPUD1-213ENST00000568358 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.53□□□□□ -1.36
HERPUD1-213ENST00000568358 ARHGEF25Q86VW2 580 aa6.53□□□□□ -1.36
HERPUD1-213ENST00000568358 DCBLD2Q96PD2 775 aa6.53□□□□□ -1.36
HERPUD1-213ENST00000568358 PUS7Q96PZ0 661 aaKnown RBP6.53□□□□□ -1.36
HERPUD1-213ENST00000568358 CAMKK2Q96RR4 588 aa6.53□□□□□ -1.36
HERPUD1-213ENST00000568358 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
HERPUD1-213ENST00000568358 WDR17Q8IZU2 1322 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms