RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
KLHDC4-220ENST00000568338 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
KLHDC4-220ENST00000568338 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
KLHDC4-220ENST00000568338 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
KLHDC4-220ENST00000568338 NRKQ7Z2Y5 1582 aa11.93□□□□□ -0.5
KLHDC4-220ENST00000568338 RGPD8O14715 1765 aaPredicted RBP11.93□□□□□ -0.5
KLHDC4-220ENST00000568338 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
KLHDC4-220ENST00000568338 TRPM3Q9HCF6 1732 aaPredicted RBP11.93□□□□□ -0.5
KLHDC4-220ENST00000568338 ALS2Q96Q42 1657 aa11.93□□□□□ -0.5
KLHDC4-220ENST00000568338 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 SAFB2Q14151 953 aaKnown RBP eCLIP11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 TRAK1Q9UPV9 953 aa11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 CCDC7Q96M83 1385 aa11.92□□□□□ -0.5
KLHDC4-220ENST00000568338 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
KLHDC4-220ENST00000568338 HAX1O00165 279 aa11.91□□□□□ -0.5
KLHDC4-220ENST00000568338 EVA1CP58658 441 aa11.91□□□□□ -0.5
KLHDC4-220ENST00000568338 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
KLHDC4-220ENST00000568338 TESK2Q96S53 571 aa11.91□□□□□ -0.5
KLHDC4-220ENST00000568338 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
KLHDC4-220ENST00000568338 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
KLHDC4-220ENST00000568338 C11orf95C9JLR9 678 aaPredicted RBP11.9□□□□□ -0.5
KLHDC4-220ENST00000568338 TMF1P82094 1093 aa11.9□□□□□ -0.5
KLHDC4-220ENST00000568338 CHRNA2Q15822 529 aa11.9□□□□□ -0.5
KLHDC4-220ENST00000568338 BARGINQ6ZT62 677 aa11.9□□□□□ -0.5
KLHDC4-220ENST00000568338 POGKQ9P215 609 aa11.9□□□□□ -0.5
KLHDC4-220ENST00000568338 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
KLHDC4-220ENST00000568338 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
KLHDC4-220ENST00000568338 MYOM1P52179 1685 aa11.88□□□□□ -0.51
KLHDC4-220ENST00000568338 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
KLHDC4-220ENST00000568338 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
KLHDC4-220ENST00000568338 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
KLHDC4-220ENST00000568338 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
KLHDC4-220ENST00000568338 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
KLHDC4-220ENST00000568338 CDCA8Q53HL2 280 aa11.87□□□□□ -0.51
KLHDC4-220ENST00000568338 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
KLHDC4-220ENST00000568338 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
KLHDC4-220ENST00000568338 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
KLHDC4-220ENST00000568338 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 TULP4Q9NRJ4 1543 aa11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 OVOS2A0A0G2JMS6 1433 aa11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
KLHDC4-220ENST00000568338 RGPD3A6NKT7 1758 aaPredicted RBP11.85□□□□□ -0.51
KLHDC4-220ENST00000568338 RGPD4Q7Z3J3 1758 aa11.85□□□□□ -0.51
KLHDC4-220ENST00000568338 DDX10Q13206 875 aaKnown RBP11.85□□□□□ -0.51
KLHDC4-220ENST00000568338 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
KLHDC4-220ENST00000568338 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
KLHDC4-220ENST00000568338 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
KLHDC4-220ENST00000568338 PLSCR1O15162 318 aa11.84□□□□□ -0.51
KLHDC4-220ENST00000568338 PTGER2P43116 358 aa11.84□□□□□ -0.51
KLHDC4-220ENST00000568338 LARP1Q6PKG0 1096 aaKnown RBP11.84□□□□□ -0.51
KLHDC4-220ENST00000568338 POLR3GLQ9BT43 218 aa11.84□□□□□ -0.51
KLHDC4-220ENST00000568338 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
KLHDC4-220ENST00000568338 ATP7BP35670 1465 aa11.83□□□□□ -0.52
KLHDC4-220ENST00000568338 EVX2Q03828 476 aa11.83□□□□□ -0.52
KLHDC4-220ENST00000568338 PDGFDQ9GZP0 370 aaPredicted RBP11.83□□□□□ -0.52
KLHDC4-220ENST00000568338 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
KLHDC4-220ENST00000568338 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
KLHDC4-220ENST00000568338 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
KLHDC4-220ENST00000568338 STK32BQ9NY57 414 aa11.82□□□□□ -0.52
KLHDC4-220ENST00000568338 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
KLHDC4-220ENST00000568338 PARP4Q9UKK3 1724 aaKnown RBP11.81□□□□□ -0.52
KLHDC4-220ENST00000568338 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
KLHDC4-220ENST00000568338 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
KLHDC4-220ENST00000568338 WASLO00401 505 aaPredicted RBP11.8□□□□□ -0.52
KLHDC4-220ENST00000568338 GPR162Q16538 588 aa11.8□□□□□ -0.52
KLHDC4-220ENST00000568338 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
KLHDC4-220ENST00000568338 CPDO75976 1380 aa11.79□□□□□ -0.52
KLHDC4-220ENST00000568338 CRB1P82279 1406 aa11.78□□□□□ -0.52
KLHDC4-220ENST00000568338 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
KLHDC4-220ENST00000568338 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
KLHDC4-220ENST00000568338 DDB1Q16531 1140 aa11.78□□□□□ -0.52
KLHDC4-220ENST00000568338 ARXQ96QS3 562 aa11.78□□□□□ -0.52
KLHDC4-220ENST00000568338 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
KLHDC4-220ENST00000568338 COL5A2P05997 1499 aaPredicted RBP11.77□□□□□ -0.52
KLHDC4-220ENST00000568338 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
KLHDC4-220ENST00000568338 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
KLHDC4-220ENST00000568338 LRRC37A3O60309 1634 aa11.77□□□□□ -0.53
KLHDC4-220ENST00000568338 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
KLHDC4-220ENST00000568338 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
KLHDC4-220ENST00000568338 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
KLHDC4-220ENST00000568338 PELP1Q8IZL8 1130 aaKnown RBP11.76□□□□□ -0.53
KLHDC4-220ENST00000568338 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 UTRNP46939 3433 aa11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 ABTB2Q8N961 1025 aa11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 CHD4Q14839 1912 aa11.75□□□□□ -0.53
KLHDC4-220ENST00000568338 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
KLHDC4-220ENST00000568338 PTF1AQ7RTS3 328 aa11.74□□□□□ -0.53
KLHDC4-220ENST00000568338 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
KLHDC4-220ENST00000568338 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms