RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 FAM196AQ6ZSG2 479 aa18.17■□□□□ 0.5
TSC2-220ENST00000568238 EDC4Q6P2E9 1401 aaKnown RBP18.16■□□□□ 0.5
TSC2-220ENST00000568238 HDGFL2Q7Z4V5 671 aaPredicted RBP18.16■□□□□ 0.5
TSC2-220ENST00000568238 ARHGEF25Q86VW2 580 aa18.16■□□□□ 0.5
TSC2-220ENST00000568238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.16■□□□□ 0.5
TSC2-220ENST00000568238 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
TSC2-220ENST00000568238 USP31Q70CQ4 1352 aa18.16■□□□□ 0.5
TSC2-220ENST00000568238 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
TSC2-220ENST00000568238 WDR17Q8IZU2 1322 aa18.15■□□□□ 0.5
TSC2-220ENST00000568238 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
TSC2-220ENST00000568238 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.49
TSC2-220ENST00000568238 TOM1L2Q6ZVM7 507 aa18.14■□□□□ 0.49
TSC2-220ENST00000568238 TESK2Q96S53 571 aa18.14■□□□□ 0.49
TSC2-220ENST00000568238 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
TSC2-220ENST00000568238 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.49
TSC2-220ENST00000568238 PEAK1Q9H792 1746 aa18.14■□□□□ 0.49
TSC2-220ENST00000568238 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
TSC2-220ENST00000568238 TRIM37O94972 964 aa18.12■□□□□ 0.49
TSC2-220ENST00000568238 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
TSC2-220ENST00000568238 NME9Q86XW9 330 aa18.12■□□□□ 0.49
TSC2-220ENST00000568238 USP47Q96K76 1375 aa18.12■□□□□ 0.49
TSC2-220ENST00000568238 RREB1Q92766 1687 aa18.12■□□□□ 0.49
TSC2-220ENST00000568238 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
TSC2-220ENST00000568238 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
TSC2-220ENST00000568238 OVOS2A0A0G2JMS6 1433 aa18.11■□□□□ 0.49
TSC2-220ENST00000568238 OVOS2A0A0J9YW53 1432 aa18.11■□□□□ 0.49
TSC2-220ENST00000568238 OVOS2Q6IE36 1432 aa18.11■□□□□ 0.49
TSC2-220ENST00000568238 LRP5O75197 1615 aa18.11■□□□□ 0.49
TSC2-220ENST00000568238 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
TSC2-220ENST00000568238 CSB-PGBD3P0DP91 1061 aa18.09■□□□□ 0.49
TSC2-220ENST00000568238 NUP188Q5SRE5 1749 aa18.09■□□□□ 0.49
TSC2-220ENST00000568238 DDB1Q16531 1140 aa18.08■□□□□ 0.48
TSC2-220ENST00000568238 TIMELESSQ9UNS1 1208 aa18.08■□□□□ 0.48
TSC2-220ENST00000568238 RGPD3A6NKT7 1758 aaPredicted RBP18.08■□□□□ 0.48
TSC2-220ENST00000568238 RGPD4Q7Z3J3 1758 aa18.08■□□□□ 0.48
TSC2-220ENST00000568238 C11orf95C9JLR9 678 aaPredicted RBP18.07■□□□□ 0.48
TSC2-220ENST00000568238 APBA3O96018 575 aa18.07■□□□□ 0.48
TSC2-220ENST00000568238 CDCA7Q9BWT1 371 aaPredicted RBP18.07■□□□□ 0.48
TSC2-220ENST00000568238 CARD10Q9BWT7 1032 aa18.07■□□□□ 0.48
TSC2-220ENST00000568238 CCDC7Q96M83 1385 aa18.06■□□□□ 0.48
TSC2-220ENST00000568238 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
TSC2-220ENST00000568238 PSDA5PKW4 1024 aaPredicted RBP18.06■□□□□ 0.48
TSC2-220ENST00000568238 EZH2Q15910 746 aaKnown RBP18.06■□□□□ 0.48
TSC2-220ENST00000568238 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
TSC2-220ENST00000568238 ERBB3P21860 1342 aa18.05■□□□□ 0.48
TSC2-220ENST00000568238 TMF1P82094 1093 aa18.05■□□□□ 0.48
TSC2-220ENST00000568238 CAMKK2Q96RR4 588 aa18.05■□□□□ 0.48
TSC2-220ENST00000568238 KIF20BQ96Q89 1820 aa18.04■□□□□ 0.48
TSC2-220ENST00000568238 MYOM1P52179 1685 aa18.03■□□□□ 0.48
TSC2-220ENST00000568238 TNS2Q63HR2 1409 aa18.03■□□□□ 0.48
TSC2-220ENST00000568238 BCL9O00512 1426 aa18.01■□□□□ 0.47
TSC2-220ENST00000568238 R3HDM1Q15032 1099 aaKnown RBP18■□□□□ 0.47
TSC2-220ENST00000568238 COG3Q96JB2 828 aa18■□□□□ 0.47
TSC2-220ENST00000568238 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
TSC2-220ENST00000568238 MARCH10Q8NA82 808 aaPredicted RBP17.99■□□□□ 0.47
TSC2-220ENST00000568238 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
TSC2-220ENST00000568238 NLRP2Q9NX02 1062 aa17.99■□□□□ 0.47
TSC2-220ENST00000568238 NHSQ6T4R5 1651 aa17.98■□□□□ 0.47
TSC2-220ENST00000568238 EXOC5O00471 708 aa17.97■□□□□ 0.47
TSC2-220ENST00000568238 IP6K1Q92551 441 aa17.96■□□□□ 0.47
TSC2-220ENST00000568238 BCL11BQ9C0K0 894 aaPredicted RBP17.96■□□□□ 0.47
TSC2-220ENST00000568238 RGPD2P0DJD1 1756 aa17.96■□□□□ 0.47
TSC2-220ENST00000568238 IL2RBP14784 551 aa17.95■□□□□ 0.46
TSC2-220ENST00000568238 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
TSC2-220ENST00000568238 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
TSC2-220ENST00000568238 NBPF14Q5TI25 921 aa17.94■□□□□ 0.46
TSC2-220ENST00000568238 PLSCR1O15162 318 aa17.93■□□□□ 0.46
TSC2-220ENST00000568238 AMPHP49418 695 aa17.93■□□□□ 0.46
TSC2-220ENST00000568238 PTF1AQ7RTS3 328 aa17.93■□□□□ 0.46
TSC2-220ENST00000568238 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
TSC2-220ENST00000568238 LTV1Q96GA3 475 aaPredicted RBP17.92■□□□□ 0.46
TSC2-220ENST00000568238 BTAF1O14981 1849 aa17.91■□□□□ 0.46
TSC2-220ENST00000568238 FYB1O15117 783 aa17.91■□□□□ 0.46
TSC2-220ENST00000568238 HOXC9P31274 260 aa17.91■□□□□ 0.46
TSC2-220ENST00000568238 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
TSC2-220ENST00000568238 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
TSC2-220ENST00000568238 SHANK3Q9BYB0 1731 aa17.9■□□□□ 0.46
TSC2-220ENST00000568238 FBLN1P23142 703 aa17.9■□□□□ 0.46
TSC2-220ENST00000568238 RRS1Q15050 365 aaKnown RBP17.89■□□□□ 0.45
TSC2-220ENST00000568238 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.45
TSC2-220ENST00000568238 ANKRD26Q9UPS8 1709 aa17.88■□□□□ 0.45
TSC2-220ENST00000568238 CASZ1Q86V15 1759 aa17.88■□□□□ 0.45
TSC2-220ENST00000568238 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
TSC2-220ENST00000568238 ACSBG1Q96GR2 724 aa17.86■□□□□ 0.45
TSC2-220ENST00000568238 MEGF6O75095 1541 aa17.86■□□□□ 0.45
TSC2-220ENST00000568238 KCNQ2O43526 872 aa17.85■□□□□ 0.45
TSC2-220ENST00000568238 FLT4P35916 1363 aa17.85■□□□□ 0.45
TSC2-220ENST00000568238 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
TSC2-220ENST00000568238 CARD14Q9BXL6 1004 aa17.85■□□□□ 0.45
TSC2-220ENST00000568238 ANO8Q9HCE9 1232 aaPredicted RBP17.85■□□□□ 0.45
TSC2-220ENST00000568238 INSRP06213 1382 aa17.83■□□□□ 0.45
TSC2-220ENST00000568238 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
TSC2-220ENST00000568238 TXNRD1Q16881 649 aa17.83■□□□□ 0.44
TSC2-220ENST00000568238 PROM2Q8N271 834 aa17.83■□□□□ 0.44
TSC2-220ENST00000568238 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
TSC2-220ENST00000568238 PAPPAQ13219 1627 aa17.83■□□□□ 0.44
TSC2-220ENST00000568238 DDX54Q8TDD1 881 aaKnown RBP17.82■□□□□ 0.44
TSC2-220ENST00000568238 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
TSC2-220ENST00000568238 CGNL1Q0VF96 1302 aa17.81■□□□□ 0.44
TSC2-220ENST00000568238 HSP90AB2PQ58FF8 381 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms