RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 ANKRD26Q9UPS8 1709 aa17.49■□□□□ 0.39
GINS3-209ENST00000567909 FBLN1P23142 703 aa17.48■□□□□ 0.39
GINS3-209ENST00000567909 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
GINS3-209ENST00000567909 KNSTRNQ9Y448 316 aa17.47■□□□□ 0.39
GINS3-209ENST00000567909 COL5A2P05997 1499 aaPredicted RBP17.47■□□□□ 0.39
GINS3-209ENST00000567909 RGS12O14924 1447 aa17.47■□□□□ 0.39
GINS3-209ENST00000567909 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
GINS3-209ENST00000567909 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
GINS3-209ENST00000567909 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
GINS3-209ENST00000567909 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.39
GINS3-209ENST00000567909 SPATA31A5Q5VU36 1347 aa17.45■□□□□ 0.38
GINS3-209ENST00000567909 SPATA31A7Q8IWB4 1347 aa17.45■□□□□ 0.38
GINS3-209ENST00000567909 ABCC6O95255 1503 aa17.44■□□□□ 0.38
GINS3-209ENST00000567909 A0A0G2JS52 829 aa17.44■□□□□ 0.38
GINS3-209ENST00000567909 AMPHP49418 695 aa17.44■□□□□ 0.38
GINS3-209ENST00000567909 MYT1Q01538 1121 aa17.44■□□□□ 0.38
GINS3-209ENST00000567909 RRS1Q15050 365 aaKnown RBP17.44■□□□□ 0.38
GINS3-209ENST00000567909 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
GINS3-209ENST00000567909 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
GINS3-209ENST00000567909 CSB-PGBD3P0DP91 1061 aa17.43■□□□□ 0.38
GINS3-209ENST00000567909 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
GINS3-209ENST00000567909 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
GINS3-209ENST00000567909 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
GINS3-209ENST00000567909 TOM1L2Q6ZVM7 507 aa17.42■□□□□ 0.38
GINS3-209ENST00000567909 IP6K1Q92551 441 aa17.41■□□□□ 0.38
GINS3-209ENST00000567909 WDR17Q8IZU2 1322 aa17.41■□□□□ 0.38
GINS3-209ENST00000567909 NSD2O96028 1365 aa17.4■□□□□ 0.38
GINS3-209ENST00000567909 CRB1P82279 1406 aa17.4■□□□□ 0.38
GINS3-209ENST00000567909 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
GINS3-209ENST00000567909 SEPT12Q8IYM1 358 aa17.4■□□□□ 0.38
GINS3-209ENST00000567909 LTV1Q96GA3 475 aaPredicted RBP17.4■□□□□ 0.38
GINS3-209ENST00000567909 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
GINS3-209ENST00000567909 PPM1GO15355 546 aaPredicted RBP17.39■□□□□ 0.37
GINS3-209ENST00000567909 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
GINS3-209ENST00000567909 HOXC9P31274 260 aa17.39■□□□□ 0.37
GINS3-209ENST00000567909 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
GINS3-209ENST00000567909 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
GINS3-209ENST00000567909 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
GINS3-209ENST00000567909 BLMP54132 1417 aaPredicted RBP17.38■□□□□ 0.37
GINS3-209ENST00000567909 RGPD2P0DJD1 1756 aa17.38■□□□□ 0.37
GINS3-209ENST00000567909 SOCS7O14512 581 aa17.38■□□□□ 0.37
GINS3-209ENST00000567909 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
GINS3-209ENST00000567909 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
GINS3-209ENST00000567909 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
GINS3-209ENST00000567909 ERBB3P21860 1342 aa17.38■□□□□ 0.37
GINS3-209ENST00000567909 ONECUT3O60422 494 aaPredicted RBP17.37■□□□□ 0.37
GINS3-209ENST00000567909 NLRP2Q9NX02 1062 aa17.37■□□□□ 0.37
GINS3-209ENST00000567909 RTL1A6NKG5 1358 aa17.37■□□□□ 0.37
GINS3-209ENST00000567909 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
GINS3-209ENST00000567909 WNK3Q9BYP7 1800 aa17.36■□□□□ 0.37
GINS3-209ENST00000567909 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
GINS3-209ENST00000567909 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
GINS3-209ENST00000567909 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
GINS3-209ENST00000567909 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
GINS3-209ENST00000567909 FLT4P35916 1363 aa17.35■□□□□ 0.37
GINS3-209ENST00000567909 HSP90AB2PQ58FF8 381 aa17.34■□□□□ 0.37
GINS3-209ENST00000567909 POLKQ9UBT6 870 aa17.34■□□□□ 0.37
GINS3-209ENST00000567909 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
GINS3-209ENST00000567909 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
GINS3-209ENST00000567909 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
GINS3-209ENST00000567909 INSRP06213 1382 aa17.31■□□□□ 0.36
GINS3-209ENST00000567909 PARP4Q9UKK3 1724 aaKnown RBP17.31■□□□□ 0.36
GINS3-209ENST00000567909 DDX10Q13206 875 aaKnown RBP17.31■□□□□ 0.36
GINS3-209ENST00000567909 EP400Q96L91 3159 aa17.3■□□□□ 0.36
GINS3-209ENST00000567909 NPC1L1Q9UHC9 1359 aa17.3■□□□□ 0.36
GINS3-209ENST00000567909 FAM182BQ5T319 152 aa17.29■□□□□ 0.36
GINS3-209ENST00000567909 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
GINS3-209ENST00000567909 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
GINS3-209ENST00000567909 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
GINS3-209ENST00000567909 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.36
GINS3-209ENST00000567909 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
GINS3-209ENST00000567909 CDCA7Q9BWT1 371 aaPredicted RBP17.27■□□□□ 0.36
GINS3-209ENST00000567909 IL2RBP14784 551 aa17.26■□□□□ 0.35
GINS3-209ENST00000567909 DDB1Q16531 1140 aa17.26■□□□□ 0.35
GINS3-209ENST00000567909 DISP2A7MBM2 1401 aa17.26■□□□□ 0.35
GINS3-209ENST00000567909 UPF1Q92900 1129 aaKnown RBP eCLIP17.25■□□□□ 0.35
GINS3-209ENST00000567909 MTHFSP49914 203 aa17.24■□□□□ 0.35
GINS3-209ENST00000567909 EIF4A2Q14240 407 aaKnown RBP17.24■□□□□ 0.35
GINS3-209ENST00000567909 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
GINS3-209ENST00000567909 EXOC5O00471 708 aa17.23■□□□□ 0.35
GINS3-209ENST00000567909 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
GINS3-209ENST00000567909 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
GINS3-209ENST00000567909 EYA1Q99502 592 aa17.21■□□□□ 0.35
GINS3-209ENST00000567909 MEGF6O75095 1541 aa17.21■□□□□ 0.34
GINS3-209ENST00000567909 TNS2Q63HR2 1409 aa17.21■□□□□ 0.34
GINS3-209ENST00000567909 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
GINS3-209ENST00000567909 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
GINS3-209ENST00000567909 TATP17735 454 aaPredicted RBP17.18■□□□□ 0.34
GINS3-209ENST00000567909 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
GINS3-209ENST00000567909 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
GINS3-209ENST00000567909 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
GINS3-209ENST00000567909 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
GINS3-209ENST00000567909 PPP2R1AP30153 589 aa17.17■□□□□ 0.34
GINS3-209ENST00000567909 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
GINS3-209ENST00000567909 TRIM37O94972 964 aa17.16■□□□□ 0.34
GINS3-209ENST00000567909 IL13P35225 146 aa17.16■□□□□ 0.34
GINS3-209ENST00000567909 SF3B2Q13435 895 aaKnown RBP17.16■□□□□ 0.34
GINS3-209ENST00000567909 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
GINS3-209ENST00000567909 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
GINS3-209ENST00000567909 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms