RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
SMPD3-210ENST00000567811 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
SMPD3-210ENST00000567811 DEFB132Q7Z7B7 95 aa10.02□□□□□ -0.81
SMPD3-210ENST00000567811 LMO7Q8WWI1 1683 aa10.02□□□□□ -0.81
SMPD3-210ENST00000567811 SLIT3O75094 1523 aa10.02□□□□□ -0.81
SMPD3-210ENST00000567811 EDC4Q6P2E9 1401 aaKnown RBP10.01□□□□□ -0.81
SMPD3-210ENST00000567811 COG3Q96JB2 828 aa10.01□□□□□ -0.81
SMPD3-210ENST00000567811 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
SMPD3-210ENST00000567811 CRB1P82279 1406 aa10□□□□□ -0.81
SMPD3-210ENST00000567811 FYB1O15117 783 aa10□□□□□ -0.81
SMPD3-210ENST00000567811 BAG6P46379 1132 aa10□□□□□ -0.81
SMPD3-210ENST00000567811 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.81
SMPD3-210ENST00000567811 CDCA7Q9BWT1 371 aaPredicted RBP10□□□□□ -0.81
SMPD3-210ENST00000567811 CARD10Q9BWT7 1032 aa10□□□□□ -0.81
SMPD3-210ENST00000567811 WDR17Q8IZU2 1322 aa10□□□□□ -0.81
SMPD3-210ENST00000567811 COL5A2P05997 1499 aaPredicted RBP9.99□□□□□ -0.81
SMPD3-210ENST00000567811 C11orf95C9JLR9 678 aaPredicted RBP9.99□□□□□ -0.81
SMPD3-210ENST00000567811 EXOC5O00471 708 aa9.99□□□□□ -0.81
SMPD3-210ENST00000567811 TRIM37O94972 964 aa9.99□□□□□ -0.81
SMPD3-210ENST00000567811 FBLN1P23142 703 aa9.98□□□□□ -0.81
SMPD3-210ENST00000567811 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
SMPD3-210ENST00000567811 DDB1Q16531 1140 aa9.98□□□□□ -0.81
SMPD3-210ENST00000567811 IP6K1Q92551 441 aa9.98□□□□□ -0.81
SMPD3-210ENST00000567811 THSD7AQ9UPZ6 1657 aa9.98□□□□□ -0.81
SMPD3-210ENST00000567811 ANKRD36BQ8N2N9 1353 aa9.98□□□□□ -0.81
SMPD3-210ENST00000567811 LTN1O94822 1766 aa9.98□□□□□ -0.81
SMPD3-210ENST00000567811 APBA3O96018 575 aa9.97□□□□□ -0.81
SMPD3-210ENST00000567811 HSPA5P11021 654 aaKnown RBP9.97□□□□□ -0.81
SMPD3-210ENST00000567811 AMPHP49418 695 aa9.97□□□□□ -0.81
SMPD3-210ENST00000567811 POLR3GLQ9BT43 218 aa9.97□□□□□ -0.81
SMPD3-210ENST00000567811 CARD14Q9BXL6 1004 aa9.97□□□□□ -0.81
SMPD3-210ENST00000567811 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
SMPD3-210ENST00000567811 NLRP2Q9NX02 1062 aa9.97□□□□□ -0.81
SMPD3-210ENST00000567811 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
SMPD3-210ENST00000567811 NFAT5O94916 1531 aa9.96□□□□□ -0.82
SMPD3-210ENST00000567811 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
SMPD3-210ENST00000567811 LTV1Q96GA3 475 aaPredicted RBP9.95□□□□□ -0.82
SMPD3-210ENST00000567811 RGPD1P0DJD0 1748 aa9.95□□□□□ -0.82
SMPD3-210ENST00000567811 EP400Q96L91 3159 aa9.94□□□□□ -0.82
SMPD3-210ENST00000567811 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
SMPD3-210ENST00000567811 SBF2Q86WG5 1849 aa9.94□□□□□ -0.82
SMPD3-210ENST00000567811 PARP4Q9UKK3 1724 aaKnown RBP9.94□□□□□ -0.82
SMPD3-210ENST00000567811 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
SMPD3-210ENST00000567811 ERBB3P21860 1342 aa9.94□□□□□ -0.82
SMPD3-210ENST00000567811 EZH2Q15910 746 aaKnown RBP9.94□□□□□ -0.82
SMPD3-210ENST00000567811 MARCH10Q8NA82 808 aaPredicted RBP9.94□□□□□ -0.82
SMPD3-210ENST00000567811 CAMKK2Q96RR4 588 aa9.94□□□□□ -0.82
SMPD3-210ENST00000567811 OVOS2A0A0J9YW53 1432 aa9.93□□□□□ -0.82
SMPD3-210ENST00000567811 OVOS2Q6IE36 1432 aa9.93□□□□□ -0.82
SMPD3-210ENST00000567811 MAP3K19Q56UN5 1328 aa9.93□□□□□ -0.82
SMPD3-210ENST00000567811 IL2RBP14784 551 aa9.93□□□□□ -0.82
SMPD3-210ENST00000567811 HOXC9P31274 260 aa9.93□□□□□ -0.82
SMPD3-210ENST00000567811 RRS1Q15050 365 aaKnown RBP9.92□□□□□ -0.82
SMPD3-210ENST00000567811 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
SMPD3-210ENST00000567811 PANK3Q9H999 370 aa9.92□□□□□ -0.82
SMPD3-210ENST00000567811 ABCC6O95255 1503 aa9.92□□□□□ -0.82
SMPD3-210ENST00000567811 PLSCR1O15162 318 aa9.91□□□□□ -0.82
SMPD3-210ENST00000567811 RGPD2P0DJD1 1756 aa9.91□□□□□ -0.82
SMPD3-210ENST00000567811 CGNL1Q0VF96 1302 aa9.9□□□□□ -0.82
SMPD3-210ENST00000567811 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
SMPD3-210ENST00000567811 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
SMPD3-210ENST00000567811 KIF20BQ96Q89 1820 aa9.9□□□□□ -0.82
SMPD3-210ENST00000567811 WNK3Q9BYP7 1800 aa9.89□□□□□ -0.83
SMPD3-210ENST00000567811 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
SMPD3-210ENST00000567811 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
SMPD3-210ENST00000567811 NBPF6Q5VWK0 638 aa9.89□□□□□ -0.83
SMPD3-210ENST00000567811 PTF1AQ7RTS3 328 aa9.89□□□□□ -0.83
SMPD3-210ENST00000567811 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
SMPD3-210ENST00000567811 NBPF4Q96M43 638 aa9.89□□□□□ -0.83
SMPD3-210ENST00000567811 TNS1Q9HBL0 1735 aaKnown RBP9.89□□□□□ -0.83
SMPD3-210ENST00000567811 OVOS2A0A0G2JMS6 1433 aa9.89□□□□□ -0.83
SMPD3-210ENST00000567811 DISP2A7MBM2 1401 aa9.89□□□□□ -0.83
SMPD3-210ENST00000567811 R3HDM1Q15032 1099 aaKnown RBP9.88□□□□□ -0.83
SMPD3-210ENST00000567811 ZCRB1Q8TBF4 217 aaKnown RBP9.88□□□□□ -0.83
SMPD3-210ENST00000567811 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
SMPD3-210ENST00000567811 PARD3Q8TEW0 1356 aa9.88□□□□□ -0.83
SMPD3-210ENST00000567811 PEAK1Q9H792 1746 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 MYOM1P52179 1685 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 LRRC37A3O60309 1634 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 KCNQ2O43526 872 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 ACSBG1Q96GR2 724 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 BCL9O00512 1426 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 KIF24Q5T7B8 1368 aa9.87□□□□□ -0.83
SMPD3-210ENST00000567811 TNNT2P45379 298 aaPredicted RBP9.86□□□□□ -0.83
SMPD3-210ENST00000567811 PROM2Q8N271 834 aa9.86□□□□□ -0.83
SMPD3-210ENST00000567811 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
SMPD3-210ENST00000567811 POLKQ9UBT6 870 aa9.86□□□□□ -0.83
SMPD3-210ENST00000567811 KNSTRNQ9Y448 316 aa9.86□□□□□ -0.83
SMPD3-210ENST00000567811 EMILIN1Q9Y6C2 1016 aa9.86□□□□□ -0.83
SMPD3-210ENST00000567811 FAM208AQ9UK61 1670 aaKnown RBP9.86□□□□□ -0.83
SMPD3-210ENST00000567811 INSRP06213 1382 aa9.86□□□□□ -0.83
SMPD3-210ENST00000567811 WASHC2AQ641Q2 1341 aa9.85□□□□□ -0.83
SMPD3-210ENST00000567811 TATP17735 454 aaPredicted RBP9.85□□□□□ -0.83
SMPD3-210ENST00000567811 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
SMPD3-210ENST00000567811 RTL1A6NKG5 1358 aa9.85□□□□□ -0.83
SMPD3-210ENST00000567811 FLT4P35916 1363 aa9.85□□□□□ -0.83
SMPD3-210ENST00000567811 TXNRD1Q16881 649 aa9.84□□□□□ -0.83
SMPD3-210ENST00000567811 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
SMPD3-210ENST00000567811 SMG6Q86US8 1419 aaKnown RBP9.83□□□□□ -0.84
SMPD3-210ENST00000567811 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms