RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 NUBP1P53384 320 aa13.24□□□□□ -0.29
CDH13-210ENST00000567445 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
CDH13-210ENST00000567445 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
CDH13-210ENST00000567445 SRPK2P78362 688 aaKnown RBP13.23□□□□□ -0.29
CDH13-210ENST00000567445 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
CDH13-210ENST00000567445 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
CDH13-210ENST00000567445 MS4A3Q96HJ5 214 aa13.23□□□□□ -0.29
CDH13-210ENST00000567445 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
CDH13-210ENST00000567445 PHRF1Q9P1Y6 1649 aaKnown RBP13.23□□□□□ -0.29
CDH13-210ENST00000567445 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
CDH13-210ENST00000567445 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
CDH13-210ENST00000567445 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.29
CDH13-210ENST00000567445 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.3
CDH13-210ENST00000567445 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.3
CDH13-210ENST00000567445 KIF12Q96FN5 646 aa13.21□□□□□ -0.3
CDH13-210ENST00000567445 CABP2Q9NPB3 220 aa13.21□□□□□ -0.3
CDH13-210ENST00000567445 SPATA31A1Q5TZJ5 1347 aa13.2□□□□□ -0.3
CDH13-210ENST00000567445 LHX8Q68G74 356 aa13.2□□□□□ -0.3
CDH13-210ENST00000567445 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
CDH13-210ENST00000567445 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
CDH13-210ENST00000567445 THSD7AQ9UPZ6 1657 aa13.2□□□□□ -0.3
CDH13-210ENST00000567445 USP19O94966 1318 aa13.19□□□□□ -0.3
CDH13-210ENST00000567445 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
CDH13-210ENST00000567445 CPDO75976 1380 aa13.19□□□□□ -0.3
CDH13-210ENST00000567445 NRKQ7Z2Y5 1582 aa13.18□□□□□ -0.3
CDH13-210ENST00000567445 BAG6P46379 1132 aa13.18□□□□□ -0.3
CDH13-210ENST00000567445 NLRP13Q86W25 1043 aa13.18□□□□□ -0.3
CDH13-210ENST00000567445 SIN3AQ96ST3 1273 aa13.18□□□□□ -0.3
CDH13-210ENST00000567445 EVA1CP58658 441 aa13.17□□□□□ -0.3
CDH13-210ENST00000567445 FAM182BQ5T319 152 aa13.17□□□□□ -0.3
CDH13-210ENST00000567445 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
CDH13-210ENST00000567445 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 EVC2Q86UK5 1308 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 GCP02774 474 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 USP6P35125 1406 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
CDH13-210ENST00000567445 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
CDH13-210ENST00000567445 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
CDH13-210ENST00000567445 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.3
CDH13-210ENST00000567445 MAP3K13O43283 966 aa13.14□□□□□ -0.31
CDH13-210ENST00000567445 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
CDH13-210ENST00000567445 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
CDH13-210ENST00000567445 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
CDH13-210ENST00000567445 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
CDH13-210ENST00000567445 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
CDH13-210ENST00000567445 NLRP6P59044 892 aa13.13□□□□□ -0.31
CDH13-210ENST00000567445 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
CDH13-210ENST00000567445 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
CDH13-210ENST00000567445 TNS1Q9HBL0 1735 aaKnown RBP13.12□□□□□ -0.31
CDH13-210ENST00000567445 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
CDH13-210ENST00000567445 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
CDH13-210ENST00000567445 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
CDH13-210ENST00000567445 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
CDH13-210ENST00000567445 SLIT3O75094 1523 aa13.11□□□□□ -0.31
CDH13-210ENST00000567445 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
CDH13-210ENST00000567445 TRIM37O94972 964 aa13.1□□□□□ -0.31
CDH13-210ENST00000567445 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
CDH13-210ENST00000567445 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
CDH13-210ENST00000567445 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
CDH13-210ENST00000567445 ATMINO43313 823 aaPredicted RBP13.09□□□□□ -0.31
CDH13-210ENST00000567445 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
CDH13-210ENST00000567445 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
CDH13-210ENST00000567445 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
CDH13-210ENST00000567445 CRB1P82279 1406 aa13.09□□□□□ -0.31
CDH13-210ENST00000567445 TTC21BQ7Z4L5 1316 aa13.08□□□□□ -0.31
CDH13-210ENST00000567445 LRP5O75197 1615 aa13.08□□□□□ -0.32
CDH13-210ENST00000567445 APBA3O96018 575 aa13.08□□□□□ -0.32
CDH13-210ENST00000567445 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
CDH13-210ENST00000567445 CAMKK2Q96RR4 588 aa13.08□□□□□ -0.32
CDH13-210ENST00000567445 TTC21AQ8NDW8 1320 aa13.08□□□□□ -0.32
CDH13-210ENST00000567445 PARD3Q8TEW0 1356 aa13.07□□□□□ -0.32
CDH13-210ENST00000567445 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
CDH13-210ENST00000567445 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
CDH13-210ENST00000567445 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
CDH13-210ENST00000567445 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
CDH13-210ENST00000567445 PARP4Q9UKK3 1724 aaKnown RBP13.07□□□□□ -0.32
CDH13-210ENST00000567445 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
CDH13-210ENST00000567445 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
CDH13-210ENST00000567445 COL18A1P39060 1754 aa13.06□□□□□ -0.32
CDH13-210ENST00000567445 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
CDH13-210ENST00000567445 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
CDH13-210ENST00000567445 R3HDM1Q15032 1099 aaKnown RBP13.05□□□□□ -0.32
CDH13-210ENST00000567445 TOM1L2Q6ZVM7 507 aa13.05□□□□□ -0.32
CDH13-210ENST00000567445 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
CDH13-210ENST00000567445 AXIN2Q9Y2T1 843 aa13.05□□□□□ -0.32
CDH13-210ENST00000567445 PCDHB13Q9Y5F0 798 aa13.05□□□□□ -0.32
CDH13-210ENST00000567445 WDR17Q8IZU2 1322 aa13.04□□□□□ -0.32
CDH13-210ENST00000567445 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
CDH13-210ENST00000567445 SOX12O15370 315 aa13.03□□□□□ -0.32
CDH13-210ENST00000567445 TIE1P35590 1138 aa13.03□□□□□ -0.32
CDH13-210ENST00000567445 DDB1Q16531 1140 aa13.03□□□□□ -0.32
CDH13-210ENST00000567445 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
CDH13-210ENST00000567445 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.32
CDH13-210ENST00000567445 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.32
CDH13-210ENST00000567445 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms