RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 ATP7BP35670 1465 aa8.23□□□□□ -1.09
GINS3-206ENST00000567143 SRPK2P78362 688 aaKnown RBP8.22□□□□□ -1.09
GINS3-206ENST00000567143 SLC26A8Q96RN1 970 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 TBC1D2Q9BYX2 928 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 ABCA3Q99758 1704 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 POLR3AO14802 1390 aaPredicted RBP8.22□□□□□ -1.09
GINS3-206ENST00000567143 NSD3Q9BZ95 1437 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 TOM1O60784 492 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 PANK2Q9BZ23 570 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 PHRF1Q9P1Y6 1649 aaKnown RBP8.22□□□□□ -1.09
GINS3-206ENST00000567143 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
GINS3-206ENST00000567143 EXOSC9Q06265 439 aaKnown RBP8.22□□□□□ -1.09
GINS3-206ENST00000567143 LNPKQ9C0E8 428 aa8.21□□□□□ -1.09
GINS3-206ENST00000567143 RUNDC1Q96C34 613 aa8.21□□□□□ -1.1
GINS3-206ENST00000567143 THUMPD2Q9BTF0 503 aaKnown RBP8.21□□□□□ -1.1
GINS3-206ENST00000567143 SSH2Q76I76 1423 aa8.21□□□□□ -1.1
GINS3-206ENST00000567143 SBNO1A3KN83 1393 aa8.2□□□□□ -1.1
GINS3-206ENST00000567143 NINLQ9Y2I6 1382 aa8.2□□□□□ -1.1
GINS3-206ENST00000567143 APBB1O00213 710 aa8.2□□□□□ -1.1
GINS3-206ENST00000567143 PDE3AQ14432 1141 aa8.2□□□□□ -1.1
GINS3-206ENST00000567143 PLPPR3Q6T4P5 718 aa8.2□□□□□ -1.1
GINS3-206ENST00000567143 TRMT2AQ8IZ69 625 aaKnown RBP8.2□□□□□ -1.1
GINS3-206ENST00000567143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.2□□□□□ -1.1
GINS3-206ENST00000567143 MINK1Q8N4C8 1332 aaPredicted RBP8.2□□□□□ -1.1
GINS3-206ENST00000567143 PROSER2Q86WR7 435 aaPredicted RBP8.2□□□□□ -1.1
GINS3-206ENST00000567143 CFAP53Q96M91 514 aa8.2□□□□□ -1.1
GINS3-206ENST00000567143 HSP90AA1P07900 732 aaKnown RBP8.19□□□□□ -1.1
GINS3-206ENST00000567143 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
GINS3-206ENST00000567143 SOS2Q07890 1332 aaPredicted RBP8.19□□□□□ -1.1
GINS3-206ENST00000567143 MAPK8IP3Q9UPT6 1336 aa8.19□□□□□ -1.1
GINS3-206ENST00000567143 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
GINS3-206ENST00000567143 PMFBP1Q8TBY8 1022 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 SSH1Q8WYL5 1049 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 HMOX1P09601 288 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 C22orf23Q9BZE7 217 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 NOB1Q9ULX3 412 aaKnown RBP8.18□□□□□ -1.1
GINS3-206ENST00000567143 RGPD8O14715 1765 aaPredicted RBP8.18□□□□□ -1.1
GINS3-206ENST00000567143 MYOM1P52179 1685 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 NWD2Q9ULI1 1742 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 TRIM27P14373 513 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 ZKSCAN2Q63HK3 967 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 SLAIN2Q9P270 581 aa8.18□□□□□ -1.1
GINS3-206ENST00000567143 PLEKHG3A1L390 1219 aa8.17□□□□□ -1.1
GINS3-206ENST00000567143 RRAGDQ9NQL2 400 aaPredicted RBP8.17□□□□□ -1.1
GINS3-206ENST00000567143 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
GINS3-206ENST00000567143 SOX12O15370 315 aa8.17□□□□□ -1.1
GINS3-206ENST00000567143 TMEM57Q8N5G2 664 aa8.17□□□□□ -1.1
GINS3-206ENST00000567143 NAP1L5Q96NT1 182 aaPredicted RBP8.17□□□□□ -1.1
GINS3-206ENST00000567143 SLIT3O75094 1523 aa8.16□□□□□ -1.1
GINS3-206ENST00000567143 RIPK4P57078 832 aa8.16□□□□□ -1.1
GINS3-206ENST00000567143 MVPQ14764 893 aaKnown RBP8.16□□□□□ -1.1
GINS3-206ENST00000567143 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
GINS3-206ENST00000567143 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
GINS3-206ENST00000567143 MYH16Q9H6N6 1097 aa8.16□□□□□ -1.1
GINS3-206ENST00000567143 INSRP06213 1382 aa8.16□□□□□ -1.1
GINS3-206ENST00000567143 CD163L1Q9NR16 1453 aa8.15□□□□□ -1.1
GINS3-206ENST00000567143 RBM42Q9BTD8 480 aaKnown RBP8.15□□□□□ -1.1
GINS3-206ENST00000567143 ANKRD45Q5TZF3 282 aa8.15□□□□□ -1.11
GINS3-206ENST00000567143 BRINP3Q76B58 766 aa8.15□□□□□ -1.11
GINS3-206ENST00000567143 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.11
GINS3-206ENST00000567143 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 GOLGA6L3A6NEY3 463 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 WASLO00401 505 aaPredicted RBP8.14□□□□□ -1.11
GINS3-206ENST00000567143 XRCC6P12956 609 aaKnown RBP eCLIP8.14□□□□□ -1.11
GINS3-206ENST00000567143 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
GINS3-206ENST00000567143 HSCBQ8IWL3 235 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 JCADQ9P266 1359 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 TRAK2O60296 914 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 MCM4P33991 863 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 ANKRD26Q9UPS8 1709 aa8.14□□□□□ -1.11
GINS3-206ENST00000567143 ATAD2Q6PL18 1390 aa8.13□□□□□ -1.11
GINS3-206ENST00000567143 TMPOP42166 694 aaKnown RBP8.13□□□□□ -1.11
GINS3-206ENST00000567143 FOXD4L5Q5VV16 416 aaPredicted RBP8.13□□□□□ -1.11
GINS3-206ENST00000567143 ILDR1Q86SU0 546 aaPredicted RBP8.13□□□□□ -1.11
GINS3-206ENST00000567143 FOXD4L4Q8WXT5 416 aaPredicted RBP8.13□□□□□ -1.11
GINS3-206ENST00000567143 NRAPQ86VF7 1730 aa8.13□□□□□ -1.11
GINS3-206ENST00000567143 PRAM1Q96QH2 718 aa8.13□□□□□ -1.11
GINS3-206ENST00000567143 PLCH1Q4KWH8 1693 aa8.13□□□□□ -1.11
GINS3-206ENST00000567143 ATF3P18847 181 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 NCLP19338 710 aaKnown RBP8.12□□□□□ -1.11
GINS3-206ENST00000567143 DCTN1Q14203 1278 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 CDK12Q9NYV4 1490 aaPredicted RBP8.12□□□□□ -1.11
GINS3-206ENST00000567143 LMO7Q8WWI1 1683 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 TNS3Q68CZ2 1445 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 ATF7IPQ6VMQ6 1270 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 PRR36Q9H6K5 1346 aa8.12□□□□□ -1.11
GINS3-206ENST00000567143 PIK3C2AO00443 1686 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
GINS3-206ENST00000567143 PRKAR2BP31323 418 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 WDR63Q8IWG1 891 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 TSPYL6Q8N831 410 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 WNK3Q9BYP7 1800 aa8.11□□□□□ -1.11
GINS3-206ENST00000567143 CD2BP2O95400 341 aaKnown RBP8.11□□□□□ -1.11
GINS3-206ENST00000567143 CABP1Q9NZU7 370 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms