RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 SOX12O15370 315 aa22.37■■□□□ 1.17
PALB2-205ENST00000567003 KCNQ2O43526 872 aa22.37■■□□□ 1.17
PALB2-205ENST00000567003 YY1P25490 414 aa22.36■■□□□ 1.17
PALB2-205ENST00000567003 CPSF1Q10570 1443 aaKnown RBP22.36■■□□□ 1.17
PALB2-205ENST00000567003 AKAP12Q02952 1782 aa22.35■■□□□ 1.17
PALB2-205ENST00000567003 CASZ1Q86V15 1759 aa22.35■■□□□ 1.17
PALB2-205ENST00000567003 MARCH10Q8NA82 808 aaPredicted RBP22.35■■□□□ 1.17
PALB2-205ENST00000567003 PDGFDQ9GZP0 370 aaPredicted RBP22.35■■□□□ 1.17
PALB2-205ENST00000567003 WDR17Q8IZU2 1322 aa22.34■■□□□ 1.17
PALB2-205ENST00000567003 TRPM1Q7Z4N2 1603 aa22.34■■□□□ 1.17
PALB2-205ENST00000567003 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.17
PALB2-205ENST00000567003 TTC21BQ7Z4L5 1316 aa22.32■■□□□ 1.16
PALB2-205ENST00000567003 EVC2Q86UK5 1308 aa22.32■■□□□ 1.16
PALB2-205ENST00000567003 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
PALB2-205ENST00000567003 PLSCR1O15162 318 aa22.32■■□□□ 1.16
PALB2-205ENST00000567003 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
PALB2-205ENST00000567003 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
PALB2-205ENST00000567003 PROM2Q8N271 834 aa22.31■■□□□ 1.16
PALB2-205ENST00000567003 NINLQ9Y2I6 1382 aa22.3■■□□□ 1.16
PALB2-205ENST00000567003 CSB-PGBD3P0DP91 1061 aa22.3■■□□□ 1.16
PALB2-205ENST00000567003 NFAT5O94916 1531 aa22.29■■□□□ 1.16
PALB2-205ENST00000567003 MYOM1P52179 1685 aa22.28■■□□□ 1.16
PALB2-205ENST00000567003 ZBTB7AO95365 584 aa22.28■■□□□ 1.16
PALB2-205ENST00000567003 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
PALB2-205ENST00000567003 CARD10Q9BWT7 1032 aa22.26■■□□□ 1.15
PALB2-205ENST00000567003 ROCK2O75116 1388 aaKnown RBP22.25■■□□□ 1.15
PALB2-205ENST00000567003 BCL9O00512 1426 aa22.25■■□□□ 1.15
PALB2-205ENST00000567003 KCNH5Q8NCM2 988 aa22.25■■□□□ 1.15
PALB2-205ENST00000567003 CDCA7Q9BWT1 371 aaPredicted RBP22.25■■□□□ 1.15
PALB2-205ENST00000567003 UTRNP46939 3433 aa22.24■■□□□ 1.15
PALB2-205ENST00000567003 ATF5Q9Y2D1 282 aaPredicted RBP22.24■■□□□ 1.15
PALB2-205ENST00000567003 TTC21AQ8NDW8 1320 aa22.24■■□□□ 1.15
PALB2-205ENST00000567003 MON2Q7Z3U7 1717 aa22.23■■□□□ 1.15
PALB2-205ENST00000567003 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
PALB2-205ENST00000567003 ZNF692Q9BU19 519 aaPredicted RBP22.23■■□□□ 1.15
PALB2-205ENST00000567003 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
PALB2-205ENST00000567003 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
PALB2-205ENST00000567003 DCAF8L1A6NGE4 600 aa22.21■■□□□ 1.15
PALB2-205ENST00000567003 EXOC5O00471 708 aa22.21■■□□□ 1.15
PALB2-205ENST00000567003 PTGER2P43116 358 aa22.21■■□□□ 1.15
PALB2-205ENST00000567003 NEUROD1Q13562 356 aa22.21■■□□□ 1.15
PALB2-205ENST00000567003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.2■■□□□ 1.14
PALB2-205ENST00000567003 ACSBG1Q96GR2 724 aa22.2■■□□□ 1.14
PALB2-205ENST00000567003 STK32BQ9NY57 414 aa22.2■■□□□ 1.14
PALB2-205ENST00000567003 NHSQ6T4R5 1651 aa22.2■■□□□ 1.14
PALB2-205ENST00000567003 CCDC7Q96M83 1385 aa22.19■■□□□ 1.14
PALB2-205ENST00000567003 LTN1O94822 1766 aa22.18■■□□□ 1.14
PALB2-205ENST00000567003 SLC15A2Q16348 729 aa22.18■■□□□ 1.14
PALB2-205ENST00000567003 ABCC6O95255 1503 aa22.17■■□□□ 1.14
PALB2-205ENST00000567003 NME9Q86XW9 330 aa22.17■■□□□ 1.14
PALB2-205ENST00000567003 USP54Q70EL1 1684 aa22.16■■□□□ 1.14
PALB2-205ENST00000567003 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
PALB2-205ENST00000567003 NLRP2Q9NX02 1062 aa22.15■■□□□ 1.14
PALB2-205ENST00000567003 ERBB3P21860 1342 aa22.14■■□□□ 1.14
PALB2-205ENST00000567003 FHDC1Q9C0D6 1143 aaPredicted RBP22.14■■□□□ 1.13
PALB2-205ENST00000567003 BTAF1O14981 1849 aa22.14■■□□□ 1.13
PALB2-205ENST00000567003 KAT6BQ8WYB5 2073 aa22.14■■□□□ 1.13
PALB2-205ENST00000567003 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
PALB2-205ENST00000567003 USP31Q70CQ4 1352 aa22.13■■□□□ 1.13
PALB2-205ENST00000567003 SBNO2Q9Y2G9 1366 aa22.13■■□□□ 1.13
PALB2-205ENST00000567003 TMC1Q8TDI8 760 aa22.11■■□□□ 1.13
PALB2-205ENST00000567003 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
PALB2-205ENST00000567003 SGIP1Q9BQI5 828 aa22.1■■□□□ 1.13
PALB2-205ENST00000567003 SYT17Q9BSW7 474 aa22.1■■□□□ 1.13
PALB2-205ENST00000567003 MTFR1LQ9H019 292 aa22.1■■□□□ 1.13
PALB2-205ENST00000567003 IL2RBP14784 551 aa22.09■■□□□ 1.13
PALB2-205ENST00000567003 ZNF827Q17R98 1081 aa22.09■■□□□ 1.13
PALB2-205ENST00000567003 SLC12A5Q9H2X9 1139 aa22.08■■□□□ 1.13
PALB2-205ENST00000567003 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
PALB2-205ENST00000567003 LRRC4BQ9NT99 713 aa22.06■■□□□ 1.12
PALB2-205ENST00000567003 CARD11Q9BXL7 1154 aa22.05■■□□□ 1.12
PALB2-205ENST00000567003 A0A1W2PP64 1363 aa22.04■■□□□ 1.12
PALB2-205ENST00000567003 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
PALB2-205ENST00000567003 LTV1Q96GA3 475 aaPredicted RBP22.04■■□□□ 1.12
PALB2-205ENST00000567003 EDC4Q6P2E9 1401 aaKnown RBP22.04■■□□□ 1.12
PALB2-205ENST00000567003 ARXQ96QS3 562 aa22.03■■□□□ 1.12
PALB2-205ENST00000567003 CHD4Q14839 1912 aa22.02■■□□□ 1.12
PALB2-205ENST00000567003 DDX54Q8TDD1 881 aaKnown RBP22.01■■□□□ 1.11
PALB2-205ENST00000567003 TUBGCP6Q96RT7 1819 aa22.01■■□□□ 1.11
PALB2-205ENST00000567003 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
PALB2-205ENST00000567003 KCNQ4P56696 695 aa21.99■■□□□ 1.11
PALB2-205ENST00000567003 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
PALB2-205ENST00000567003 DOT1LQ8TEK3 1739 aa21.98■■□□□ 1.11
PALB2-205ENST00000567003 KLHL34Q8N239 644 aa21.98■■□□□ 1.11
PALB2-205ENST00000567003 IP6K1Q92551 441 aa21.98■■□□□ 1.11
PALB2-205ENST00000567003 AKT1S1Q96B36 256 aa21.98■■□□□ 1.11
PALB2-205ENST00000567003 FAM208AQ9UK61 1670 aaKnown RBP21.98■■□□□ 1.11
PALB2-205ENST00000567003 FBLN1P23142 703 aa21.97■■□□□ 1.11
PALB2-205ENST00000567003 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
PALB2-205ENST00000567003 QSER1Q2KHR3 1735 aa21.96■■□□□ 1.11
PALB2-205ENST00000567003 SHANK3Q9BYB0 1731 aa21.96■■□□□ 1.11
PALB2-205ENST00000567003 MAP3K5Q99683 1374 aa21.96■■□□□ 1.11
PALB2-205ENST00000567003 SYTL4Q96C24 671 aaPredicted RBP21.95■■□□□ 1.1
PALB2-205ENST00000567003 PNPLA7Q6ZV29 1317 aa21.95■■□□□ 1.1
PALB2-205ENST00000567003 MEGF6O75095 1541 aa21.93■■□□□ 1.1
PALB2-205ENST00000567003 NSD2O96028 1365 aa21.93■■□□□ 1.1
PALB2-205ENST00000567003 PRIM1P49642 420 aaKnown RBP21.93■■□□□ 1.1
PALB2-205ENST00000567003 MAP3K19Q56UN5 1328 aa21.93■■□□□ 1.1
PALB2-205ENST00000567003 COL24A1Q17RW2 1714 aa21.92■■□□□ 1.1
PALB2-205ENST00000567003 GPR162Q16538 588 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms