RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
SMPD3-207ENST00000566466 ZC3H6P61129 1189 aaKnown RBP12.59□□□□□ -0.39
SMPD3-207ENST00000566466 MORC1Q86VD1 984 aa12.59□□□□□ -0.39
SMPD3-207ENST00000566466 KCNH5Q8NCM2 988 aa12.59□□□□□ -0.39
SMPD3-207ENST00000566466 COL5A2P05997 1499 aaPredicted RBP12.59□□□□□ -0.39
SMPD3-207ENST00000566466 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
SMPD3-207ENST00000566466 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
SMPD3-207ENST00000566466 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
SMPD3-207ENST00000566466 CNGB1Q14028 1251 aaPredicted RBP12.58□□□□□ -0.4
SMPD3-207ENST00000566466 CHRNA2Q15822 529 aa12.58□□□□□ -0.4
SMPD3-207ENST00000566466 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
SMPD3-207ENST00000566466 KIF24Q5T7B8 1368 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 ADAMTS2O95450 1211 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 HOXC9P31274 260 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
SMPD3-207ENST00000566466 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
SMPD3-207ENST00000566466 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
SMPD3-207ENST00000566466 RALBP1Q15311 655 aa12.56□□□□□ -0.4
SMPD3-207ENST00000566466 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
SMPD3-207ENST00000566466 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
SMPD3-207ENST00000566466 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.56□□□□□ -0.4
SMPD3-207ENST00000566466 FLT4P35916 1363 aa12.56□□□□□ -0.4
SMPD3-207ENST00000566466 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
SMPD3-207ENST00000566466 MTHFSP49914 203 aa12.55□□□□□ -0.4
SMPD3-207ENST00000566466 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
SMPD3-207ENST00000566466 IP6K1Q92551 441 aa12.55□□□□□ -0.4
SMPD3-207ENST00000566466 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
SMPD3-207ENST00000566466 RGS17Q9UGC6 210 aaPredicted RBP12.55□□□□□ -0.4
SMPD3-207ENST00000566466 ERBB3P21860 1342 aa12.55□□□□□ -0.4
SMPD3-207ENST00000566466 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
SMPD3-207ENST00000566466 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
SMPD3-207ENST00000566466 ZBTB22O15209 634 aa12.53□□□□□ -0.4
SMPD3-207ENST00000566466 ATRNO75882 1429 aa12.53□□□□□ -0.4
SMPD3-207ENST00000566466 GLI3P10071 1580 aa12.52□□□□□ -0.4
SMPD3-207ENST00000566466 EIF4A2Q14240 407 aaKnown RBP12.52□□□□□ -0.41
SMPD3-207ENST00000566466 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
SMPD3-207ENST00000566466 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
SMPD3-207ENST00000566466 IL13P35225 146 aa12.51□□□□□ -0.41
SMPD3-207ENST00000566466 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
SMPD3-207ENST00000566466 AFF2P51816 1311 aa12.51□□□□□ -0.41
SMPD3-207ENST00000566466 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
SMPD3-207ENST00000566466 MIER1Q8N108 512 aa12.5□□□□□ -0.41
SMPD3-207ENST00000566466 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
SMPD3-207ENST00000566466 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
SMPD3-207ENST00000566466 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
SMPD3-207ENST00000566466 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
SMPD3-207ENST00000566466 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
SMPD3-207ENST00000566466 AMPHP49418 695 aa12.49□□□□□ -0.41
SMPD3-207ENST00000566466 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
SMPD3-207ENST00000566466 CRB1P82279 1406 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 ANP32CO43423 234 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 THSD7AQ9UPZ6 1657 aa12.48□□□□□ -0.41
SMPD3-207ENST00000566466 MEGF6O75095 1541 aa12.47□□□□□ -0.41
SMPD3-207ENST00000566466 KDRP35968 1356 aa12.47□□□□□ -0.41
SMPD3-207ENST00000566466 SPATA31A5Q5VU36 1347 aa12.47□□□□□ -0.41
SMPD3-207ENST00000566466 SPATA31A7Q8IWB4 1347 aa12.47□□□□□ -0.41
SMPD3-207ENST00000566466 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
SMPD3-207ENST00000566466 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
SMPD3-207ENST00000566466 EYA1Q99502 592 aa12.47□□□□□ -0.41
SMPD3-207ENST00000566466 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
SMPD3-207ENST00000566466 VPS72Q15906 364 aa12.46□□□□□ -0.41
SMPD3-207ENST00000566466 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
SMPD3-207ENST00000566466 USP21Q9UK80 565 aa12.46□□□□□ -0.41
SMPD3-207ENST00000566466 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
SMPD3-207ENST00000566466 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
SMPD3-207ENST00000566466 LTV1Q96GA3 475 aaPredicted RBP12.45□□□□□ -0.42
SMPD3-207ENST00000566466 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
SMPD3-207ENST00000566466 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
SMPD3-207ENST00000566466 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
SMPD3-207ENST00000566466 SHANK3Q9BYB0 1731 aa12.44□□□□□ -0.42
SMPD3-207ENST00000566466 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
SMPD3-207ENST00000566466 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
SMPD3-207ENST00000566466 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
SMPD3-207ENST00000566466 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
SMPD3-207ENST00000566466 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
SMPD3-207ENST00000566466 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
SMPD3-207ENST00000566466 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
SMPD3-207ENST00000566466 RGS12O14924 1447 aa12.41□□□□□ -0.42
SMPD3-207ENST00000566466 GJD4Q96KN9 370 aaPredicted RBP12.41□□□□□ -0.42
SMPD3-207ENST00000566466 FOXD4L1Q9NU39 408 aa12.41□□□□□ -0.42
SMPD3-207ENST00000566466 PARP4Q9UKK3 1724 aaKnown RBP12.41□□□□□ -0.42
SMPD3-207ENST00000566466 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.42
SMPD3-207ENST00000566466 BARGINQ6ZT62 677 aa12.4□□□□□ -0.42
SMPD3-207ENST00000566466 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
SMPD3-207ENST00000566466 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
SMPD3-207ENST00000566466 NLRP2Q9NX02 1062 aa12.4□□□□□ -0.42
SMPD3-207ENST00000566466 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
SMPD3-207ENST00000566466 QTRT2Q9H974 415 aaKnown RBP12.39□□□□□ -0.43
SMPD3-207ENST00000566466 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
SMPD3-207ENST00000566466 TNS2Q63HR2 1409 aa12.38□□□□□ -0.43
SMPD3-207ENST00000566466 HMOX1P09601 288 aa12.38□□□□□ -0.43
SMPD3-207ENST00000566466 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
SMPD3-207ENST00000566466 EVA1CP58658 441 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms