RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CHRNA2Q15822 529 aa11.17□□□□□ -0.62
CDH13-208ENST00000566333 CC2D1BQ5T0F9 858 aaKnown RBP11.17□□□□□ -0.62
CDH13-208ENST00000566333 C8orf37Q96NL8 207 aa11.17□□□□□ -0.62
CDH13-208ENST00000566333 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
CDH13-208ENST00000566333 THSD7AQ9UPZ6 1657 aa11.17□□□□□ -0.62
CDH13-208ENST00000566333 ATRNO75882 1429 aa11.17□□□□□ -0.62
CDH13-208ENST00000566333 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
CDH13-208ENST00000566333 AFF2P51816 1311 aa11.16□□□□□ -0.62
CDH13-208ENST00000566333 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
CDH13-208ENST00000566333 MEX3CQ5U5Q3 659 aaKnown RBP11.16□□□□□ -0.62
CDH13-208ENST00000566333 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
CDH13-208ENST00000566333 FLT4P35916 1363 aa11.16□□□□□ -0.62
CDH13-208ENST00000566333 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
CDH13-208ENST00000566333 BRWD3Q6RI45 1802 aa11.15□□□□□ -0.62
CDH13-208ENST00000566333 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
CDH13-208ENST00000566333 RGS17Q9UGC6 210 aaPredicted RBP11.15□□□□□ -0.62
CDH13-208ENST00000566333 EMILIN1Q9Y6C2 1016 aa11.15□□□□□ -0.62
CDH13-208ENST00000566333 PARP4Q9UKK3 1724 aaKnown RBP11.15□□□□□ -0.63
CDH13-208ENST00000566333 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
CDH13-208ENST00000566333 HOXC9P31274 260 aa11.14□□□□□ -0.63
CDH13-208ENST00000566333 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
CDH13-208ENST00000566333 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
CDH13-208ENST00000566333 EP400Q96L91 3159 aa11.14□□□□□ -0.63
CDH13-208ENST00000566333 ERBB3P21860 1342 aa11.13□□□□□ -0.63
CDH13-208ENST00000566333 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
CDH13-208ENST00000566333 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
CDH13-208ENST00000566333 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
CDH13-208ENST00000566333 INSRP06213 1382 aa11.13□□□□□ -0.63
CDH13-208ENST00000566333 PKD1L3Q7Z443 1732 aa11.12□□□□□ -0.63
CDH13-208ENST00000566333 CRB1P82279 1406 aa11.12□□□□□ -0.63
CDH13-208ENST00000566333 IP6K1Q92551 441 aa11.12□□□□□ -0.63
CDH13-208ENST00000566333 NGLY1Q96IV0 654 aa11.12□□□□□ -0.63
CDH13-208ENST00000566333 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
CDH13-208ENST00000566333 CNGB1Q14028 1251 aaPredicted RBP11.11□□□□□ -0.63
CDH13-208ENST00000566333 UNC5CLQ8IV45 518 aa11.11□□□□□ -0.63
CDH13-208ENST00000566333 USP21Q9UK80 565 aa11.11□□□□□ -0.63
CDH13-208ENST00000566333 WDR17Q8IZU2 1322 aa11.1□□□□□ -0.63
CDH13-208ENST00000566333 PPP2R1AP30153 589 aa11.1□□□□□ -0.63
CDH13-208ENST00000566333 PIAS4Q8N2W9 510 aaPredicted RBP11.1□□□□□ -0.63
CDH13-208ENST00000566333 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
CDH13-208ENST00000566333 VIRMAQ69YN4 1812 aaKnown RBP11.09□□□□□ -0.63
CDH13-208ENST00000566333 AMPHP49418 695 aa11.09□□□□□ -0.63
CDH13-208ENST00000566333 HSP90AB2PQ58FF8 381 aa11.09□□□□□ -0.63
CDH13-208ENST00000566333 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
CDH13-208ENST00000566333 PRKRIP1Q9H875 184 aaPredicted RBP11.09□□□□□ -0.63
CDH13-208ENST00000566333 RGS12O14924 1447 aa11.09□□□□□ -0.63
CDH13-208ENST00000566333 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
CDH13-208ENST00000566333 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
CDH13-208ENST00000566333 RALBP1Q15311 655 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 VPS72Q15906 364 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
CDH13-208ENST00000566333 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 ANKRD24Q8TF21 1146 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 MEGF6O75095 1541 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 SPATA31A1Q5TZJ5 1347 aa11.08□□□□□ -0.64
CDH13-208ENST00000566333 PPM1GO15355 546 aaPredicted RBP11.07□□□□□ -0.64
CDH13-208ENST00000566333 MTHFSP49914 203 aa11.07□□□□□ -0.64
CDH13-208ENST00000566333 EIF4A2Q14240 407 aaKnown RBP11.07□□□□□ -0.64
CDH13-208ENST00000566333 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
CDH13-208ENST00000566333 MYBBP1AQ9BQG0 1328 aaKnown RBP11.07□□□□□ -0.64
CDH13-208ENST00000566333 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
CDH13-208ENST00000566333 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
CDH13-208ENST00000566333 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
CDH13-208ENST00000566333 KDRP35968 1356 aa11.04□□□□□ -0.64
CDH13-208ENST00000566333 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
CDH13-208ENST00000566333 OVOS2A0A0G2JMS6 1433 aa11.04□□□□□ -0.64
CDH13-208ENST00000566333 TNS2Q63HR2 1409 aa11.04□□□□□ -0.64
CDH13-208ENST00000566333 IL13P35225 146 aa11.04□□□□□ -0.64
CDH13-208ENST00000566333 LTV1Q96GA3 475 aaPredicted RBP11.04□□□□□ -0.64
CDH13-208ENST00000566333 CARD10Q9BWT7 1032 aa11.04□□□□□ -0.64
CDH13-208ENST00000566333 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
CDH13-208ENST00000566333 DLG5Q8TDM6 1919 aa11.03□□□□□ -0.64
CDH13-208ENST00000566333 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
CDH13-208ENST00000566333 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
CDH13-208ENST00000566333 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
CDH13-208ENST00000566333 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
CDH13-208ENST00000566333 DOT1LQ8TEK3 1739 aa11.03□□□□□ -0.64
CDH13-208ENST00000566333 EVA1CP58658 441 aa11.02□□□□□ -0.65
CDH13-208ENST00000566333 RBM6P78332 1123 aaKnown RBP11.02□□□□□ -0.65
CDH13-208ENST00000566333 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
CDH13-208ENST00000566333 TCP11L2Q8N4U5 519 aa11.02□□□□□ -0.65
CDH13-208ENST00000566333 USHBP1Q8N6Y0 703 aa11.02□□□□□ -0.65
CDH13-208ENST00000566333 EYA1Q99502 592 aa11.02□□□□□ -0.65
CDH13-208ENST00000566333 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
CDH13-208ENST00000566333 USP35Q9P2H5 1018 aa11.01□□□□□ -0.65
CDH13-208ENST00000566333 THRAP3Q9Y2W1 955 aaKnown RBP11.01□□□□□ -0.65
CDH13-208ENST00000566333 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
CDH13-208ENST00000566333 ADAMTS7Q9UKP4 1686 aa11.01□□□□□ -0.65
CDH13-208ENST00000566333 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
CDH13-208ENST00000566333 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
CDH13-208ENST00000566333 ANP32CO43423 234 aa11□□□□□ -0.65
CDH13-208ENST00000566333 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
CDH13-208ENST00000566333 DIAPH1O60610 1272 aaKnown RBP11□□□□□ -0.65
CDH13-208ENST00000566333 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
CDH13-208ENST00000566333 CCDC184Q52MB2 194 aa11□□□□□ -0.65
CDH13-208ENST00000566333 AEBP1Q8IUX7 1158 aa11□□□□□ -0.65
CDH13-208ENST00000566333 SCN11AQ9UI33 1791 aa11□□□□□ -0.65
CDH13-208ENST00000566333 ITGB4P16144 1822 aa11□□□□□ -0.65
CDH13-208ENST00000566333 NHSQ6T4R5 1651 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms