RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 KIF20BQ96Q89 1820 aa22.44■■□□□ 1.18
RAB40C-210ENST00000566290 PDE3BQ13370 1112 aa22.42■■□□□ 1.18
RAB40C-210ENST00000566290 CAMKK2Q96RR4 588 aa22.42■■□□□ 1.18
RAB40C-210ENST00000566290 MON2Q7Z3U7 1717 aa22.42■■□□□ 1.18
RAB40C-210ENST00000566290 ABCA3Q99758 1704 aa22.42■■□□□ 1.18
RAB40C-210ENST00000566290 DISP2A7MBM2 1401 aa22.41■■□□□ 1.18
RAB40C-210ENST00000566290 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
RAB40C-210ENST00000566290 CABP1Q9NZU7 370 aa22.41■■□□□ 1.18
RAB40C-210ENST00000566290 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
RAB40C-210ENST00000566290 AKAP12Q02952 1782 aa22.4■■□□□ 1.18
RAB40C-210ENST00000566290 PAK3O75914 559 aaPredicted RBP22.4■■□□□ 1.18
RAB40C-210ENST00000566290 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
RAB40C-210ENST00000566290 BTG4Q9NY30 223 aa22.39■■□□□ 1.17
RAB40C-210ENST00000566290 TNS1Q9HBL0 1735 aaKnown RBP22.39■■□□□ 1.17
RAB40C-210ENST00000566290 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
RAB40C-210ENST00000566290 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
RAB40C-210ENST00000566290 NUTM2GQ5VZR2 741 aa22.36■■□□□ 1.17
RAB40C-210ENST00000566290 HDGFL2Q7Z4V5 671 aaPredicted RBP22.36■■□□□ 1.17
RAB40C-210ENST00000566290 EDC4Q6P2E9 1401 aaKnown RBP22.36■■□□□ 1.17
RAB40C-210ENST00000566290 CRYBG1Q9Y4K1 1723 aa22.36■■□□□ 1.17
RAB40C-210ENST00000566290 TRIM37O94972 964 aa22.35■■□□□ 1.17
RAB40C-210ENST00000566290 CNGB1Q14028 1251 aaPredicted RBP22.35■■□□□ 1.17
RAB40C-210ENST00000566290 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
RAB40C-210ENST00000566290 SUPT16HQ9Y5B9 1047 aaKnown RBP22.34■■□□□ 1.17
RAB40C-210ENST00000566290 NRKQ7Z2Y5 1582 aa22.33■■□□□ 1.17
RAB40C-210ENST00000566290 SPATA31A5Q5VU36 1347 aa22.33■■□□□ 1.17
RAB40C-210ENST00000566290 SPATA31A7Q8IWB4 1347 aa22.33■■□□□ 1.17
RAB40C-210ENST00000566290 NEFLP07196 543 aa22.33■■□□□ 1.17
RAB40C-210ENST00000566290 MORC1Q86VD1 984 aa22.33■■□□□ 1.17
RAB40C-210ENST00000566290 APBA3O96018 575 aa22.32■■□□□ 1.16
RAB40C-210ENST00000566290 WDR43Q15061 677 aaKnown RBP eCLIP22.32■■□□□ 1.16
RAB40C-210ENST00000566290 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
RAB40C-210ENST00000566290 USP6P35125 1406 aa22.31■■□□□ 1.16
RAB40C-210ENST00000566290 SSH2Q76I76 1423 aa22.3■■□□□ 1.16
RAB40C-210ENST00000566290 RNF123Q5XPI4 1314 aa22.3■■□□□ 1.16
RAB40C-210ENST00000566290 PPP1R1BQ9UD71 204 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-210ENST00000566290 THSD7AQ9UPZ6 1657 aa22.29■■□□□ 1.16
RAB40C-210ENST00000566290 DCAF8L1A6NGE4 600 aa22.28■■□□□ 1.16
RAB40C-210ENST00000566290 FAM196AQ6ZSG2 479 aa22.28■■□□□ 1.16
RAB40C-210ENST00000566290 ABTB2Q8N961 1025 aa22.28■■□□□ 1.16
RAB40C-210ENST00000566290 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-210ENST00000566290 PHRF1Q9P1Y6 1649 aaKnown RBP22.28■■□□□ 1.16
RAB40C-210ENST00000566290 ADAMTS8Q9UP79 889 aa22.27■■□□□ 1.16
RAB40C-210ENST00000566290 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
RAB40C-210ENST00000566290 KCNQ2O43526 872 aa22.25■■□□□ 1.15
RAB40C-210ENST00000566290 NBPF14Q5TI25 921 aa22.25■■□□□ 1.15
RAB40C-210ENST00000566290 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
RAB40C-210ENST00000566290 ZNF692Q9BU19 519 aaPredicted RBP22.25■■□□□ 1.15
RAB40C-210ENST00000566290 COL14A1Q05707 1796 aaKnown RBP22.25■■□□□ 1.15
RAB40C-210ENST00000566290 FYB1O15117 783 aa22.24■■□□□ 1.15
RAB40C-210ENST00000566290 ZNF784Q8NCA9 323 aaPredicted RBP22.24■■□□□ 1.15
RAB40C-210ENST00000566290 USP19O94966 1318 aa22.24■■□□□ 1.15
RAB40C-210ENST00000566290 ZNF521Q96K83 1311 aa22.24■■□□□ 1.15
RAB40C-210ENST00000566290 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 ZC3H6P61129 1189 aaKnown RBP22.23■■□□□ 1.15
RAB40C-210ENST00000566290 IFFO2Q5TF58 517 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 TTC21BQ7Z4L5 1316 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 PIK3C2AO00443 1686 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 AATKQ6ZMQ8 1374 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 KIAA0232Q92628 1395 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 NUP188Q5SRE5 1749 aa22.23■■□□□ 1.15
RAB40C-210ENST00000566290 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
RAB40C-210ENST00000566290 RREB1Q92766 1687 aa22.22■■□□□ 1.15
RAB40C-210ENST00000566290 USP54Q70EL1 1684 aa22.21■■□□□ 1.15
RAB40C-210ENST00000566290 CHRNA2Q15822 529 aa22.21■■□□□ 1.15
RAB40C-210ENST00000566290 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
RAB40C-210ENST00000566290 PRDM11Q9NQV5 511 aa22.2■■□□□ 1.14
RAB40C-210ENST00000566290 NLRP6P59044 892 aa22.19■■□□□ 1.14
RAB40C-210ENST00000566290 GCP02774 474 aa22.18■■□□□ 1.14
RAB40C-210ENST00000566290 MTHFSP49914 203 aa22.17■■□□□ 1.14
RAB40C-210ENST00000566290 FKBP8Q14318 412 aa22.17■■□□□ 1.14
RAB40C-210ENST00000566290 SLIT3O75094 1523 aa22.16■■□□□ 1.14
RAB40C-210ENST00000566290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.15■■□□□ 1.14
RAB40C-210ENST00000566290 STRN4Q9NRL3 753 aa22.15■■□□□ 1.14
RAB40C-210ENST00000566290 OVOS2A0A0J9YW53 1432 aa22.14■■□□□ 1.13
RAB40C-210ENST00000566290 OVOS2Q6IE36 1432 aa22.14■■□□□ 1.13
RAB40C-210ENST00000566290 TTC21AQ8NDW8 1320 aa22.13■■□□□ 1.13
RAB40C-210ENST00000566290 UTRNP46939 3433 aa22.13■■□□□ 1.13
RAB40C-210ENST00000566290 NME9Q86XW9 330 aa22.13■■□□□ 1.13
RAB40C-210ENST00000566290 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
RAB40C-210ENST00000566290 CPDO75976 1380 aa22.12■■□□□ 1.13
RAB40C-210ENST00000566290 C1QTNF8P60827 252 aa22.12■■□□□ 1.13
RAB40C-210ENST00000566290 GGNBP2Q9H3C7 697 aa22.12■■□□□ 1.13
RAB40C-210ENST00000566290 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
RAB40C-210ENST00000566290 CCDC27Q2M243 656 aa22.11■■□□□ 1.13
RAB40C-210ENST00000566290 RUNDC1Q96C34 613 aa22.11■■□□□ 1.13
RAB40C-210ENST00000566290 SOX12O15370 315 aa22.1■■□□□ 1.13
RAB40C-210ENST00000566290 ZBTB7CA1YPR0 619 aa22.09■■□□□ 1.13
RAB40C-210ENST00000566290 TRMT2AQ8IZ69 625 aaKnown RBP22.09■■□□□ 1.13
RAB40C-210ENST00000566290 PELP1Q8IZL8 1130 aaKnown RBP22.09■■□□□ 1.13
RAB40C-210ENST00000566290 PDGFDQ9GZP0 370 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-210ENST00000566290 USP31Q70CQ4 1352 aa22.09■■□□□ 1.13
RAB40C-210ENST00000566290 BARGINQ6ZT62 677 aa22.07■■□□□ 1.12
RAB40C-210ENST00000566290 NFAT5O94916 1531 aa22.06■■□□□ 1.12
RAB40C-210ENST00000566290 MAP2P11137 1827 aaKnown RBP22.06■■□□□ 1.12
RAB40C-210ENST00000566290 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
RAB40C-210ENST00000566290 COL18A1P39060 1754 aa22.06■■□□□ 1.12
RAB40C-210ENST00000566290 LARP1Q6PKG0 1096 aaKnown RBP22.05■■□□□ 1.12
RAB40C-210ENST00000566290 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
RAB40C-210ENST00000566290 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 350.9 ms