RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ADH1BP00325 375 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 ADAM32Q8TC27 787 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 STK32AQ8WU08 396 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 ARHGAP9Q9BRR9 750 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 MTMR7Q9Y216 660 aa8.69□□□□□ -1.02
CNOT1-209ENST00000566240 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
CNOT1-209ENST00000566240 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-209ENST00000566240 TLL1O43897 1013 aa8.68□□□□□ -1.02
CNOT1-209ENST00000566240 LZTS3O60299 673 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-209ENST00000566240 B4GALNT3Q6L9W6 998 aa8.68□□□□□ -1.02
CNOT1-209ENST00000566240 ZBTB33Q86T24 672 aa8.68□□□□□ -1.02
CNOT1-209ENST00000566240 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
CNOT1-209ENST00000566240 UNC93B1Q9H1C4 597 aa8.68□□□□□ -1.02
CNOT1-209ENST00000566240 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.68□□□□□ -1.02
CNOT1-209ENST00000566240 V9GY48 417 aaPredicted RBP8.68□□□□□ -1.02
CNOT1-209ENST00000566240 NCOA4Q13772 614 aa8.67□□□□□ -1.02
CNOT1-209ENST00000566240 CRTC2Q53ET0 693 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-209ENST00000566240 PTCRAQ6ISU1 281 aaPredicted RBP8.67□□□□□ -1.02
CNOT1-209ENST00000566240 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
CNOT1-209ENST00000566240 PLPP7Q8NBV4 271 aa8.67□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L10C9JJH3 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L21D6R901 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 RASA1P20936 1047 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 MAP7D1Q3KQU3 841 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 CHIC2Q9UKJ5 165 aa8.66□□□□□ -1.02
CNOT1-209ENST00000566240 PTK7Q13308 1070 aa8.65□□□□□ -1.02
CNOT1-209ENST00000566240 DZIP3Q86Y13 1208 aaKnown RBP8.65□□□□□ -1.02
CNOT1-209ENST00000566240 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.02
CNOT1-209ENST00000566240 EML3Q32P44 896 aa8.64□□□□□ -1.03
CNOT1-209ENST00000566240 FAM200AQ8TCP9 573 aa8.64□□□□□ -1.03
CNOT1-209ENST00000566240 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
CNOT1-209ENST00000566240 SLC6A16Q9GZN6 736 aa8.64□□□□□ -1.03
CNOT1-209ENST00000566240 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
CNOT1-209ENST00000566240 SND1Q7KZF4 910 aaKnown RBP eCLIP8.63□□□□□ -1.03
CNOT1-209ENST00000566240 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
CNOT1-209ENST00000566240 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
CNOT1-209ENST00000566240 SH3RF1Q7Z6J0 888 aa8.62□□□□□ -1.03
CNOT1-209ENST00000566240 ANKMY2Q8IV38 441 aa8.62□□□□□ -1.03
CNOT1-209ENST00000566240 BAP1Q92560 729 aa8.62□□□□□ -1.03
CNOT1-209ENST00000566240 FAM69CQ0P6D2 419 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-209ENST00000566240 PHLDB3Q6NSJ2 640 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 TRIM50Q86XT4 487 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-209ENST00000566240 FOXD4L4Q8WXT5 416 aaPredicted RBP8.61□□□□□ -1.03
CNOT1-209ENST00000566240 PDZRN3Q9UPQ7 1066 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
CNOT1-209ENST00000566240 SSFA2P28290 1259 aa8.6□□□□□ -1.03
CNOT1-209ENST00000566240 AGERQ15109 404 aa8.6□□□□□ -1.03
CNOT1-209ENST00000566240 BPHLQ86WA6 291 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-209ENST00000566240 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-209ENST00000566240 DOLKQ9UPQ8 538 aa8.6□□□□□ -1.03
CNOT1-209ENST00000566240 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-209ENST00000566240 GGCXP38435 758 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 CLDN10P78369 228 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 DPYDQ12882 1025 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 FOXJ1Q92949 421 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 CLP1Q92989 425 aaKnown RBP8.59□□□□□ -1.03
CNOT1-209ENST00000566240 DNAAF2Q9NVR5 837 aaKnown RBP8.59□□□□□ -1.03
CNOT1-209ENST00000566240 SLAIN2Q9P270 581 aa8.59□□□□□ -1.03
CNOT1-209ENST00000566240 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-209ENST00000566240 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
CNOT1-209ENST00000566240 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
CNOT1-209ENST00000566240 LARGE2Q8N3Y3 721 aa8.58□□□□□ -1.04
CNOT1-209ENST00000566240 ZNF511Q8NB15 262 aa8.58□□□□□ -1.04
CNOT1-209ENST00000566240 ZNF594Q96JF6 807 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-209ENST00000566240 S1PR4O95977 384 aa8.57□□□□□ -1.04
CNOT1-209ENST00000566240 OXLD1Q5BKU9 147 aa8.57□□□□□ -1.04
CNOT1-209ENST00000566240 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
CNOT1-209ENST00000566240 FCF1Q9Y324 198 aaKnown RBP8.57□□□□□ -1.04
CNOT1-209ENST00000566240 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
CNOT1-209ENST00000566240 SWI5Q1ZZU3 235 aa8.56□□□□□ -1.04
CNOT1-209ENST00000566240 ATP2B4P23634 1241 aa8.55□□□□□ -1.04
CNOT1-209ENST00000566240 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-209ENST00000566240 SLC10A4Q96EP9 437 aa8.55□□□□□ -1.04
CNOT1-209ENST00000566240 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
CNOT1-209ENST00000566240 DKK1O94907 266 aa8.54□□□□□ -1.04
CNOT1-209ENST00000566240 GTF2IP78347 998 aa8.54□□□□□ -1.04
CNOT1-209ENST00000566240 NBPF20Q3BBV1 942 aa8.54□□□□□ -1.04
CNOT1-209ENST00000566240 TRIM67Q6ZTA4 783 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms