RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ARHGEF25Q86VW2 580 aa19.98■□□□□ 0.79
SPG7-213ENST00000566221 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
SPG7-213ENST00000566221 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
SPG7-213ENST00000566221 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
SPG7-213ENST00000566221 FBLN1P23142 703 aa19.97■□□□□ 0.79
SPG7-213ENST00000566221 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
SPG7-213ENST00000566221 EMILIN1Q9Y6C2 1016 aa19.97■□□□□ 0.79
SPG7-213ENST00000566221 BLMP54132 1417 aaPredicted RBP19.96■□□□□ 0.79
SPG7-213ENST00000566221 PRDM11Q9NQV5 511 aa19.96■□□□□ 0.79
SPG7-213ENST00000566221 NRAPQ86VF7 1730 aa19.96■□□□□ 0.79
SPG7-213ENST00000566221 ZBTB7CA1YPR0 619 aa19.95■□□□□ 0.78
SPG7-213ENST00000566221 AMPHP49418 695 aa19.95■□□□□ 0.78
SPG7-213ENST00000566221 COL3A1P02461 1466 aaPredicted RBP19.94■□□□□ 0.78
SPG7-213ENST00000566221 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.94■□□□□ 0.78
SPG7-213ENST00000566221 MTHFSP49914 203 aa19.94■□□□□ 0.78
SPG7-213ENST00000566221 PPM1GO15355 546 aaPredicted RBP19.93■□□□□ 0.78
SPG7-213ENST00000566221 RXRBP28702 533 aa19.93■□□□□ 0.78
SPG7-213ENST00000566221 HOXC9P31274 260 aa19.93■□□□□ 0.78
SPG7-213ENST00000566221 INSRP06213 1382 aa19.93■□□□□ 0.78
SPG7-213ENST00000566221 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
SPG7-213ENST00000566221 CAMTA1Q9Y6Y1 1673 aa19.92■□□□□ 0.78
SPG7-213ENST00000566221 ADAMTS2O95450 1211 aa19.92■□□□□ 0.78
SPG7-213ENST00000566221 IP6K1Q92551 441 aa19.92■□□□□ 0.78
SPG7-213ENST00000566221 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
SPG7-213ENST00000566221 CHRNA2Q15822 529 aa19.91■□□□□ 0.78
SPG7-213ENST00000566221 RGPD1P0DJD0 1748 aa19.9■□□□□ 0.78
SPG7-213ENST00000566221 MIER1Q8N108 512 aa19.9■□□□□ 0.78
SPG7-213ENST00000566221 SLIT2O94813 1529 aa19.89■□□□□ 0.77
SPG7-213ENST00000566221 COL5A2P05997 1499 aaPredicted RBP19.89■□□□□ 0.77
SPG7-213ENST00000566221 FAM83GA6ND36 823 aa19.88■□□□□ 0.77
SPG7-213ENST00000566221 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
SPG7-213ENST00000566221 HSP90AB2PQ58FF8 381 aa19.87■□□□□ 0.77
SPG7-213ENST00000566221 WNK3Q9BYP7 1800 aa19.86■□□□□ 0.77
SPG7-213ENST00000566221 ERBB3P21860 1342 aa19.85■□□□□ 0.77
SPG7-213ENST00000566221 C8orf37Q96NL8 207 aa19.85■□□□□ 0.77
SPG7-213ENST00000566221 AXIN2Q9Y2T1 843 aa19.85■□□□□ 0.77
SPG7-213ENST00000566221 DIAPH1O60610 1272 aaKnown RBP19.84■□□□□ 0.77
SPG7-213ENST00000566221 MRS2Q9HD23 443 aa19.84■□□□□ 0.77
SPG7-213ENST00000566221 BTG4Q9NY30 223 aa19.84■□□□□ 0.77
SPG7-213ENST00000566221 EIF4A2Q14240 407 aaKnown RBP19.83■□□□□ 0.77
SPG7-213ENST00000566221 ANKRD24Q8TF21 1146 aa19.83■□□□□ 0.77
SPG7-213ENST00000566221 NGLY1Q96IV0 654 aa19.83■□□□□ 0.77
SPG7-213ENST00000566221 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
SPG7-213ENST00000566221 CCDC184Q52MB2 194 aa19.81■□□□□ 0.76
SPG7-213ENST00000566221 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
SPG7-213ENST00000566221 NUDCQ9Y266 331 aa19.81■□□□□ 0.76
SPG7-213ENST00000566221 IL13P35225 146 aa19.8■□□□□ 0.76
SPG7-213ENST00000566221 FNBP4Q8N3X1 1017 aaPredicted RBP19.8■□□□□ 0.76
SPG7-213ENST00000566221 BCL9LQ86UU0 1499 aa19.79■□□□□ 0.76
SPG7-213ENST00000566221 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
SPG7-213ENST00000566221 CRB1P82279 1406 aa19.79■□□□□ 0.76
SPG7-213ENST00000566221 NCAPD2Q15021 1401 aa19.79■□□□□ 0.76
SPG7-213ENST00000566221 CSB-PGBD3P0DP91 1061 aa19.79■□□□□ 0.76
SPG7-213ENST00000566221 AFF2P51816 1311 aa19.78■□□□□ 0.76
SPG7-213ENST00000566221 EVA1CP58658 441 aa19.78■□□□□ 0.76
SPG7-213ENST00000566221 STRN4Q9NRL3 753 aa19.78■□□□□ 0.76
SPG7-213ENST00000566221 SRCAPQ6ZRS2 3230 aa19.78■□□□□ 0.76
SPG7-213ENST00000566221 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
SPG7-213ENST00000566221 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.76
SPG7-213ENST00000566221 UNC5CLQ8IV45 518 aa19.77■□□□□ 0.76
SPG7-213ENST00000566221 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
SPG7-213ENST00000566221 USP21Q9UK80 565 aa19.76■□□□□ 0.75
SPG7-213ENST00000566221 EYA1Q99502 592 aa19.75■□□□□ 0.75
SPG7-213ENST00000566221 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
SPG7-213ENST00000566221 KDRP35968 1356 aa19.74■□□□□ 0.75
SPG7-213ENST00000566221 LARP1Q6PKG0 1096 aaKnown RBP19.74■□□□□ 0.75
SPG7-213ENST00000566221 TOM1L2Q6ZVM7 507 aa19.74■□□□□ 0.75
SPG7-213ENST00000566221 ATRNO75882 1429 aa19.74■□□□□ 0.75
SPG7-213ENST00000566221 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
SPG7-213ENST00000566221 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.75
SPG7-213ENST00000566221 NBPF6Q5VWK0 638 aa19.73■□□□□ 0.75
SPG7-213ENST00000566221 PNISRQ8TF01 805 aaKnown RBP19.73■□□□□ 0.75
SPG7-213ENST00000566221 NBPF4Q96M43 638 aa19.73■□□□□ 0.75
SPG7-213ENST00000566221 CARD10Q9BWT7 1032 aa19.73■□□□□ 0.75
SPG7-213ENST00000566221 PKD1L3Q7Z443 1732 aa19.73■□□□□ 0.75
SPG7-213ENST00000566221 VPS72Q15906 364 aa19.72■□□□□ 0.75
SPG7-213ENST00000566221 GLI3P10071 1580 aa19.71■□□□□ 0.75
SPG7-213ENST00000566221 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
SPG7-213ENST00000566221 SPATA31A5Q5VU36 1347 aa19.71■□□□□ 0.75
SPG7-213ENST00000566221 SPATA31A7Q8IWB4 1347 aa19.71■□□□□ 0.75
SPG7-213ENST00000566221 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
SPG7-213ENST00000566221 USHBP1Q8N6Y0 703 aa19.7■□□□□ 0.74
SPG7-213ENST00000566221 SPATA31A1Q5TZJ5 1347 aa19.7■□□□□ 0.74
SPG7-213ENST00000566221 RBM6P78332 1123 aaKnown RBP19.69■□□□□ 0.74
SPG7-213ENST00000566221 SULT6B1Q6IMI4 303 aa19.69■□□□□ 0.74
SPG7-213ENST00000566221 TRPC5Q9UL62 973 aaPredicted RBP19.69■□□□□ 0.74
SPG7-213ENST00000566221 CCDC9Q9Y3X0 531 aaKnown RBP19.69■□□□□ 0.74
SPG7-213ENST00000566221 THSD7AQ9UPZ6 1657 aa19.68■□□□□ 0.74
SPG7-213ENST00000566221 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
SPG7-213ENST00000566221 FCHSD2O94868 740 aa19.68■□□□□ 0.74
SPG7-213ENST00000566221 HMOX1P09601 288 aa19.68■□□□□ 0.74
SPG7-213ENST00000566221 LRRC37A3O60309 1634 aa19.68■□□□□ 0.74
SPG7-213ENST00000566221 DLG5Q8TDM6 1919 aa19.68■□□□□ 0.74
SPG7-213ENST00000566221 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
SPG7-213ENST00000566221 MEGF6O75095 1541 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 AEBP1Q8IUX7 1158 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 FAM9BQ8IZU0 186 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 TCP11L2Q8N4U5 519 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 RSPH6AQ9H0K4 717 aa19.67■□□□□ 0.74
SPG7-213ENST00000566221 PNNQ9H307 717 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 256.6 ms