RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 COL5A2P05997 1499 aaPredicted RBP19.16■□□□□ 0.66
HERPUD1-210ENST00000565966 LARP1Q6PKG0 1096 aaKnown RBP19.15■□□□□ 0.66
HERPUD1-210ENST00000565966 COG3Q96JB2 828 aa19.15■□□□□ 0.66
HERPUD1-210ENST00000565966 AXIN2Q9Y2T1 843 aa19.15■□□□□ 0.66
HERPUD1-210ENST00000565966 A0A0G2JS52 829 aa19.14■□□□□ 0.65
HERPUD1-210ENST00000565966 FYB1O15117 783 aa19.14■□□□□ 0.65
HERPUD1-210ENST00000565966 MYT1Q01538 1121 aa19.14■□□□□ 0.65
HERPUD1-210ENST00000565966 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
HERPUD1-210ENST00000565966 USP35Q9P2H5 1018 aa19.13■□□□□ 0.65
HERPUD1-210ENST00000565966 ABCC6O95255 1503 aa19.13■□□□□ 0.65
HERPUD1-210ENST00000565966 THRAP3Q9Y2W1 955 aaKnown RBP19.12■□□□□ 0.65
HERPUD1-210ENST00000565966 CRB1P82279 1406 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 BARGINQ6ZT62 677 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 KRT27Q7Z3Y8 459 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 GGNBP2Q9H3C7 697 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 THSD7AQ9UPZ6 1657 aa19.11■□□□□ 0.65
HERPUD1-210ENST00000565966 NSD3Q9BZ95 1437 aa19.1■□□□□ 0.65
HERPUD1-210ENST00000565966 WDR17Q8IZU2 1322 aa19.09■□□□□ 0.65
HERPUD1-210ENST00000565966 TOM1L2Q6ZVM7 507 aa19.09■□□□□ 0.65
HERPUD1-210ENST00000565966 EP400Q96L91 3159 aa19.07■□□□□ 0.64
HERPUD1-210ENST00000565966 CSB-PGBD3P0DP91 1061 aa19.07■□□□□ 0.64
HERPUD1-210ENST00000565966 ZEB1P37275 1124 aaPredicted RBP19.06■□□□□ 0.64
HERPUD1-210ENST00000565966 IP6K1Q92551 441 aa19.06■□□□□ 0.64
HERPUD1-210ENST00000565966 PANK3Q9H999 370 aa19.06■□□□□ 0.64
HERPUD1-210ENST00000565966 CGNL1Q0VF96 1302 aa19.05■□□□□ 0.64
HERPUD1-210ENST00000565966 FBLN1P23142 703 aa19.05■□□□□ 0.64
HERPUD1-210ENST00000565966 CCDC125Q86Z20 511 aa19.05■□□□□ 0.64
HERPUD1-210ENST00000565966 CARD10Q9BWT7 1032 aa19.05■□□□□ 0.64
HERPUD1-210ENST00000565966 PARP4Q9UKK3 1724 aaKnown RBP19.05■□□□□ 0.64
HERPUD1-210ENST00000565966 CCDC7Q96M83 1385 aa19.05■□□□□ 0.64
HERPUD1-210ENST00000565966 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
HERPUD1-210ENST00000565966 MAP3K19Q56UN5 1328 aa19.04■□□□□ 0.64
HERPUD1-210ENST00000565966 BLMP54132 1417 aaPredicted RBP19.04■□□□□ 0.64
HERPUD1-210ENST00000565966 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
HERPUD1-210ENST00000565966 ERBB3P21860 1342 aa19.03■□□□□ 0.64
HERPUD1-210ENST00000565966 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
HERPUD1-210ENST00000565966 AMPHP49418 695 aa19.03■□□□□ 0.64
HERPUD1-210ENST00000565966 ANKRD26Q9UPS8 1709 aa19.03■□□□□ 0.64
HERPUD1-210ENST00000565966 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
HERPUD1-210ENST00000565966 ANKRD24Q8TF21 1146 aa19.02■□□□□ 0.64
HERPUD1-210ENST00000565966 HOXC9P31274 260 aa19.01■□□□□ 0.63
HERPUD1-210ENST00000565966 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
HERPUD1-210ENST00000565966 CDCA7Q9BWT1 371 aaPredicted RBP19.01■□□□□ 0.63
HERPUD1-210ENST00000565966 FAM208AQ9UK61 1670 aaKnown RBP19■□□□□ 0.63
HERPUD1-210ENST00000565966 FAM182BQ5T319 152 aa18.99■□□□□ 0.63
HERPUD1-210ENST00000565966 NLRP2Q9NX02 1062 aa18.99■□□□□ 0.63
HERPUD1-210ENST00000565966 RTL1A6NKG5 1358 aa18.98■□□□□ 0.63
HERPUD1-210ENST00000565966 FAM196AQ6ZSG2 479 aa18.98■□□□□ 0.63
HERPUD1-210ENST00000565966 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
HERPUD1-210ENST00000565966 SF3B2Q13435 895 aaKnown RBP18.97■□□□□ 0.63
HERPUD1-210ENST00000565966 DDB1Q16531 1140 aa18.97■□□□□ 0.63
HERPUD1-210ENST00000565966 LTV1Q96GA3 475 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-210ENST00000565966 KNSTRNQ9Y448 316 aa18.97■□□□□ 0.63
HERPUD1-210ENST00000565966 KIF24Q5T7B8 1368 aa18.96■□□□□ 0.63
HERPUD1-210ENST00000565966 RGPD1P0DJD0 1748 aa18.96■□□□□ 0.63
HERPUD1-210ENST00000565966 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
HERPUD1-210ENST00000565966 PEAK1Q9H792 1746 aa18.95■□□□□ 0.62
HERPUD1-210ENST00000565966 NSD2O96028 1365 aa18.94■□□□□ 0.62
HERPUD1-210ENST00000565966 FLT4P35916 1363 aa18.94■□□□□ 0.62
HERPUD1-210ENST00000565966 DISP2A7MBM2 1401 aa18.94■□□□□ 0.62
HERPUD1-210ENST00000565966 EXOC5O00471 708 aa18.94■□□□□ 0.62
HERPUD1-210ENST00000565966 KAT6BQ8WYB5 2073 aa18.94■□□□□ 0.62
HERPUD1-210ENST00000565966 EMILIN1Q9Y6C2 1016 aa18.93■□□□□ 0.62
HERPUD1-210ENST00000565966 SBF2Q86WG5 1849 aa18.93■□□□□ 0.62
HERPUD1-210ENST00000565966 INSRP06213 1382 aa18.93■□□□□ 0.62
HERPUD1-210ENST00000565966 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-210ENST00000565966 IL2RBP14784 551 aa18.92■□□□□ 0.62
HERPUD1-210ENST00000565966 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
HERPUD1-210ENST00000565966 SMG6Q86US8 1419 aaKnown RBP18.91■□□□□ 0.62
HERPUD1-210ENST00000565966 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
HERPUD1-210ENST00000565966 TNNT2P45379 298 aaPredicted RBP18.9■□□□□ 0.62
HERPUD1-210ENST00000565966 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
HERPUD1-210ENST00000565966 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
HERPUD1-210ENST00000565966 TNS1Q9HBL0 1735 aaKnown RBP18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 TRIM37O94972 964 aa18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 BAG6P46379 1132 aa18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 MORC1Q86VD1 984 aa18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 MARCH10Q8NA82 808 aaPredicted RBP18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 OVOS2A0A0G2JMS6 1433 aa18.89■□□□□ 0.61
HERPUD1-210ENST00000565966 NBPF6Q5VWK0 638 aa18.88■□□□□ 0.61
HERPUD1-210ENST00000565966 NBPF4Q96M43 638 aa18.88■□□□□ 0.61
HERPUD1-210ENST00000565966 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
HERPUD1-210ENST00000565966 BCL9O00512 1426 aa18.84■□□□□ 0.61
HERPUD1-210ENST00000565966 APBA3O96018 575 aa18.83■□□□□ 0.6
HERPUD1-210ENST00000565966 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
HERPUD1-210ENST00000565966 USHBP1Q8N6Y0 703 aa18.83■□□□□ 0.6
HERPUD1-210ENST00000565966 NPC1L1Q9UHC9 1359 aa18.82■□□□□ 0.6
HERPUD1-210ENST00000565966 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
HERPUD1-210ENST00000565966 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
HERPUD1-210ENST00000565966 TATP17735 454 aaPredicted RBP18.8■□□□□ 0.6
HERPUD1-210ENST00000565966 ZCRB1Q8TBF4 217 aaKnown RBP18.8■□□□□ 0.6
HERPUD1-210ENST00000565966 BCL11BQ9C0K0 894 aaPredicted RBP18.8■□□□□ 0.6
HERPUD1-210ENST00000565966 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
HERPUD1-210ENST00000565966 MEGF6O75095 1541 aa18.79■□□□□ 0.6
HERPUD1-210ENST00000565966 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
HERPUD1-210ENST00000565966 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
HERPUD1-210ENST00000565966 EYA1Q99502 592 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms