RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 USP35Q9P2H5 1018 aa25.93■■□□□ 1.74
CMTM3-210ENST00000565666 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
CMTM3-210ENST00000565666 ONECUT3O60422 494 aaPredicted RBP25.92■■□□□ 1.74
CMTM3-210ENST00000565666 UPF1Q92900 1129 aaKnown RBP eCLIP25.92■■□□□ 1.74
CMTM3-210ENST00000565666 RGPD5Q99666 1765 aa25.92■■□□□ 1.74
CMTM3-210ENST00000565666 NSD3Q9BZ95 1437 aa25.89■■□□□ 1.74
CMTM3-210ENST00000565666 ABCC6O95255 1503 aa25.89■■□□□ 1.74
CMTM3-210ENST00000565666 AXIN2Q9Y2T1 843 aa25.89■■□□□ 1.74
CMTM3-210ENST00000565666 THSD7AQ9UPZ6 1657 aa25.88■■□□□ 1.73
CMTM3-210ENST00000565666 GGNBP2Q9H3C7 697 aa25.88■■□□□ 1.73
CMTM3-210ENST00000565666 CRB1P82279 1406 aa25.88■■□□□ 1.73
CMTM3-210ENST00000565666 FYB1O15117 783 aa25.87■■□□□ 1.73
CMTM3-210ENST00000565666 CSB-PGBD3P0DP91 1061 aa25.86■■□□□ 1.73
CMTM3-210ENST00000565666 TOM1L2Q6ZVM7 507 aa25.86■■□□□ 1.73
CMTM3-210ENST00000565666 KRT27Q7Z3Y8 459 aa25.86■■□□□ 1.73
CMTM3-210ENST00000565666 TCP11L2Q8N4U5 519 aa25.86■■□□□ 1.73
CMTM3-210ENST00000565666 CARD14Q9BXL6 1004 aa25.86■■□□□ 1.73
CMTM3-210ENST00000565666 WDR17Q8IZU2 1322 aa25.85■■□□□ 1.73
CMTM3-210ENST00000565666 C11orf95C9JLR9 678 aaPredicted RBP25.84■■□□□ 1.73
CMTM3-210ENST00000565666 BARGINQ6ZT62 677 aa25.83■■□□□ 1.73
CMTM3-210ENST00000565666 THRAP3Q9Y2W1 955 aaKnown RBP25.83■■□□□ 1.73
CMTM3-210ENST00000565666 CGNL1Q0VF96 1302 aa25.8■■□□□ 1.72
CMTM3-210ENST00000565666 PANK3Q9H999 370 aa25.79■■□□□ 1.72
CMTM3-210ENST00000565666 FBLN1P23142 703 aa25.78■■□□□ 1.72
CMTM3-210ENST00000565666 AMPHP49418 695 aa25.78■■□□□ 1.72
CMTM3-210ENST00000565666 KIF7Q2M1P5 1343 aa25.78■■□□□ 1.72
CMTM3-210ENST00000565666 MAP3K19Q56UN5 1328 aa25.78■■□□□ 1.72
CMTM3-210ENST00000565666 BLMP54132 1417 aaPredicted RBP25.78■■□□□ 1.72
CMTM3-210ENST00000565666 WNK3Q9BYP7 1800 aa25.77■■□□□ 1.72
CMTM3-210ENST00000565666 IP6K1Q92551 441 aa25.76■■□□□ 1.71
CMTM3-210ENST00000565666 ERBB3P21860 1342 aa25.76■■□□□ 1.71
CMTM3-210ENST00000565666 PARP4Q9UKK3 1724 aaKnown RBP25.76■■□□□ 1.71
CMTM3-210ENST00000565666 ANKRD24Q8TF21 1146 aa25.75■■□□□ 1.71
CMTM3-210ENST00000565666 CARD10Q9BWT7 1032 aa25.75■■□□□ 1.71
CMTM3-210ENST00000565666 PDE3BQ13370 1112 aa25.74■■□□□ 1.71
CMTM3-210ENST00000565666 RRS1Q15050 365 aaKnown RBP25.74■■□□□ 1.71
CMTM3-210ENST00000565666 ANKRD26Q9UPS8 1709 aa25.74■■□□□ 1.71
CMTM3-210ENST00000565666 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
CMTM3-210ENST00000565666 FAM182BQ5T319 152 aa25.73■■□□□ 1.71
CMTM3-210ENST00000565666 CCDC125Q86Z20 511 aa25.73■■□□□ 1.71
CMTM3-210ENST00000565666 NLRP2Q9NX02 1062 aa25.73■■□□□ 1.71
CMTM3-210ENST00000565666 RTL1A6NKG5 1358 aa25.72■■□□□ 1.71
CMTM3-210ENST00000565666 FAM208AQ9UK61 1670 aaKnown RBP25.72■■□□□ 1.71
CMTM3-210ENST00000565666 HOXC9P31274 260 aa25.72■■□□□ 1.71
CMTM3-210ENST00000565666 LTV1Q96GA3 475 aaPredicted RBP25.72■■□□□ 1.71
CMTM3-210ENST00000565666 LRRC37A3O60309 1634 aa25.7■■□□□ 1.71
CMTM3-210ENST00000565666 SF3B2Q13435 895 aaKnown RBP25.7■■□□□ 1.7
CMTM3-210ENST00000565666 CDCA7Q9BWT1 371 aaPredicted RBP25.69■■□□□ 1.7
CMTM3-210ENST00000565666 DDB1Q16531 1140 aa25.68■■□□□ 1.7
CMTM3-210ENST00000565666 KNSTRNQ9Y448 316 aa25.68■■□□□ 1.7
CMTM3-210ENST00000565666 FAM196AQ6ZSG2 479 aa25.66■■□□□ 1.7
CMTM3-210ENST00000565666 NSD2O96028 1365 aa25.66■■□□□ 1.7
CMTM3-210ENST00000565666 RGPD1P0DJD0 1748 aa25.66■■□□□ 1.7
CMTM3-210ENST00000565666 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
CMTM3-210ENST00000565666 DISP2A7MBM2 1401 aa25.65■■□□□ 1.7
CMTM3-210ENST00000565666 FLT4P35916 1363 aa25.65■■□□□ 1.7
CMTM3-210ENST00000565666 SMG6Q86US8 1419 aaKnown RBP25.64■■□□□ 1.7
CMTM3-210ENST00000565666 MAP2P11137 1827 aaKnown RBP25.64■■□□□ 1.7
CMTM3-210ENST00000565666 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.69
CMTM3-210ENST00000565666 PPM1GO15355 546 aaPredicted RBP25.63■■□□□ 1.69
CMTM3-210ENST00000565666 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
CMTM3-210ENST00000565666 EMILIN1Q9Y6C2 1016 aa25.63■■□□□ 1.69
CMTM3-210ENST00000565666 RGPD2P0DJD1 1756 aa25.63■■□□□ 1.69
CMTM3-210ENST00000565666 WASHC2AQ641Q2 1341 aa25.63■■□□□ 1.69
CMTM3-210ENST00000565666 EP400Q96L91 3159 aa25.62■■□□□ 1.69
CMTM3-210ENST00000565666 INSRP06213 1382 aa25.61■■□□□ 1.69
CMTM3-210ENST00000565666 IL2RBP14784 551 aa25.61■■□□□ 1.69
CMTM3-210ENST00000565666 EXOC5O00471 708 aa25.6■■□□□ 1.69
CMTM3-210ENST00000565666 HSP90AB2PQ58FF8 381 aa25.6■■□□□ 1.69
CMTM3-210ENST00000565666 OVOS2A0A0G2JMS6 1433 aa25.6■■□□□ 1.69
CMTM3-210ENST00000565666 MORC1Q86VD1 984 aa25.59■■□□□ 1.69
CMTM3-210ENST00000565666 TNS1Q9HBL0 1735 aaKnown RBP25.58■■□□□ 1.69
CMTM3-210ENST00000565666 TNS2Q63HR2 1409 aa25.58■■□□□ 1.69
CMTM3-210ENST00000565666 TRIM37O94972 964 aa25.58■■□□□ 1.69
CMTM3-210ENST00000565666 DEFB132Q7Z7B7 95 aa25.58■■□□□ 1.69
CMTM3-210ENST00000565666 BAG6P46379 1132 aa25.57■■□□□ 1.68
CMTM3-210ENST00000565666 POLKQ9UBT6 870 aa25.56■■□□□ 1.68
CMTM3-210ENST00000565666 NBPF6Q5VWK0 638 aa25.54■■□□□ 1.68
CMTM3-210ENST00000565666 MARCH10Q8NA82 808 aaPredicted RBP25.54■■□□□ 1.68
CMTM3-210ENST00000565666 NBPF4Q96M43 638 aa25.54■■□□□ 1.68
CMTM3-210ENST00000565666 AMER1Q5JTC6 1135 aaPredicted RBP25.53■■□□□ 1.68
CMTM3-210ENST00000565666 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
CMTM3-210ENST00000565666 PER1O15534 1290 aaPredicted RBP25.51■■□□□ 1.67
CMTM3-210ENST00000565666 SBF2Q86WG5 1849 aa25.51■■□□□ 1.67
CMTM3-210ENST00000565666 APBA3O96018 575 aa25.49■■□□□ 1.67
CMTM3-210ENST00000565666 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
CMTM3-210ENST00000565666 EN1Q05925 392 aaPredicted RBP25.48■■□□□ 1.67
CMTM3-210ENST00000565666 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
CMTM3-210ENST00000565666 MEGF6O75095 1541 aa25.47■■□□□ 1.67
CMTM3-210ENST00000565666 CNGB1Q14028 1251 aaPredicted RBP25.46■■□□□ 1.67
CMTM3-210ENST00000565666 BCL9O00512 1426 aa25.46■■□□□ 1.67
CMTM3-210ENST00000565666 TATP17735 454 aaPredicted RBP25.45■■□□□ 1.66
CMTM3-210ENST00000565666 DDX54Q8TDD1 881 aaKnown RBP25.45■■□□□ 1.66
CMTM3-210ENST00000565666 ZCRB1Q8TBF4 217 aaKnown RBP25.44■■□□□ 1.66
CMTM3-210ENST00000565666 EIF4A2Q14240 407 aaKnown RBP25.43■■□□□ 1.66
CMTM3-210ENST00000565666 NPC1L1Q9UHC9 1359 aa25.43■■□□□ 1.66
CMTM3-210ENST00000565666 EYA1Q99502 592 aa25.42■■□□□ 1.66
CMTM3-210ENST00000565666 BCL11BQ9C0K0 894 aaPredicted RBP25.42■■□□□ 1.66
CMTM3-210ENST00000565666 SHANK3Q9BYB0 1731 aa25.42■■□□□ 1.66
CMTM3-210ENST00000565666 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms