RNA–Protein interactions for RNA: ENST00000565548.1

TUBGCP4-210, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-210ENST00000565548 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L21D6R901 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 DXOO77932 396 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 CCNYL3P0C7X3 344 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 BCAMP50895 628 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 PTK2Q05397 1052 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 TXNDC2Q86VQ3 553 aa11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
TUBGCP4-210ENST00000565548 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
TUBGCP4-210ENST00000565548 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
TUBGCP4-210ENST00000565548 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
TUBGCP4-210ENST00000565548 CHIC2Q9UKJ5 165 aa11.08□□□□□ -0.64
TUBGCP4-210ENST00000565548 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
TUBGCP4-210ENST00000565548 MMP16P51512 607 aa11.07□□□□□ -0.64
TUBGCP4-210ENST00000565548 PTK7Q13308 1070 aa11.07□□□□□ -0.64
TUBGCP4-210ENST00000565548 ZNF592Q92610 1267 aa11.07□□□□□ -0.64
TUBGCP4-210ENST00000565548 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
TUBGCP4-210ENST00000565548 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
TUBGCP4-210ENST00000565548 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
TUBGCP4-210ENST00000565548 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
TUBGCP4-210ENST00000565548 LZTS3O60299 673 aaPredicted RBP11.06□□□□□ -0.64
TUBGCP4-210ENST00000565548 NCOA4Q13772 614 aa11.06□□□□□ -0.64
TUBGCP4-210ENST00000565548 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
TUBGCP4-210ENST00000565548 NUDT12Q9BQG2 462 aa11.06□□□□□ -0.64
TUBGCP4-210ENST00000565548 ATP5J2-PTCD1G3V325 749 aa11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 SSFA2P28290 1259 aa11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 FAM69CQ0P6D2 419 aa11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 RNF135Q8IUD6 432 aa11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 PLPP7Q8NBV4 271 aa11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
TUBGCP4-210ENST00000565548 RASA1P20936 1047 aa11.04□□□□□ -0.64
TUBGCP4-210ENST00000565548 LARP1Q6PKG0 1096 aaKnown RBP11.04□□□□□ -0.64
TUBGCP4-210ENST00000565548 SPSB2Q99619 263 aa11.04□□□□□ -0.64
TUBGCP4-210ENST00000565548 CDCA7Q9BWT1 371 aaPredicted RBP11.04□□□□□ -0.64
TUBGCP4-210ENST00000565548 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
TUBGCP4-210ENST00000565548 CLP1Q92989 425 aaKnown RBP11.03□□□□□ -0.64
TUBGCP4-210ENST00000565548 TRAF7Q6Q0C0 670 aa11.02□□□□□ -0.65
TUBGCP4-210ENST00000565548 FAM200AQ8TCP9 573 aa11.02□□□□□ -0.65
TUBGCP4-210ENST00000565548 WNT2BQ93097 391 aa11.02□□□□□ -0.65
TUBGCP4-210ENST00000565548 PRDM9Q9NQV7 894 aa11.02□□□□□ -0.65
TUBGCP4-210ENST00000565548 MAP7D1Q3KQU3 841 aa11.01□□□□□ -0.65
TUBGCP4-210ENST00000565548 ANKMY2Q8IV38 441 aa11.01□□□□□ -0.65
TUBGCP4-210ENST00000565548 ADAM32Q8TC27 787 aa11.01□□□□□ -0.65
TUBGCP4-210ENST00000565548 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
TUBGCP4-210ENST00000565548 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
TUBGCP4-210ENST00000565548 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
TUBGCP4-210ENST00000565548 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
TUBGCP4-210ENST00000565548 WBP1LQ9NX94 342 aa11□□□□□ -0.65
TUBGCP4-210ENST00000565548 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.65
TUBGCP4-210ENST00000565548 E9PSI1 815 aa10.99□□□□□ -0.65
TUBGCP4-210ENST00000565548 EML3Q32P44 896 aa10.99□□□□□ -0.65
TUBGCP4-210ENST00000565548 TSGA10IPQ3SY00 556 aa10.99□□□□□ -0.65
TUBGCP4-210ENST00000565548 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
TUBGCP4-210ENST00000565548 ARHGAP9Q9BRR9 750 aa10.99□□□□□ -0.65
TUBGCP4-210ENST00000565548 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
TUBGCP4-210ENST00000565548 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
TUBGCP4-210ENST00000565548 CLDN10P78369 228 aa10.97□□□□□ -0.65
TUBGCP4-210ENST00000565548 DPYDQ12882 1025 aa10.97□□□□□ -0.65
TUBGCP4-210ENST00000565548 LHX8Q68G74 356 aa10.97□□□□□ -0.65
TUBGCP4-210ENST00000565548 DKK1O94907 266 aa10.96□□□□□ -0.65
TUBGCP4-210ENST00000565548 COPS2P61201 443 aa10.96□□□□□ -0.65
TUBGCP4-210ENST00000565548 PTCRAQ6ISU1 281 aaPredicted RBP10.96□□□□□ -0.65
TUBGCP4-210ENST00000565548 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
TUBGCP4-210ENST00000565548 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
TUBGCP4-210ENST00000565548 UNC93B1Q9H1C4 597 aa10.96□□□□□ -0.65
TUBGCP4-210ENST00000565548 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
TUBGCP4-210ENST00000565548 SWI5Q1ZZU3 235 aa10.95□□□□□ -0.66
TUBGCP4-210ENST00000565548 TRIM50Q86XT4 487 aa10.95□□□□□ -0.66
TUBGCP4-210ENST00000565548 CCDC85AQ96PX6 553 aaPredicted RBP10.95□□□□□ -0.66
TUBGCP4-210ENST00000565548 DNAAF2Q9NVR5 837 aaKnown RBP10.95□□□□□ -0.66
TUBGCP4-210ENST00000565548 ZBTB7BO15156 539 aaPredicted RBP10.94□□□□□ -0.66
TUBGCP4-210ENST00000565548 SH3RF1Q7Z6J0 888 aa10.94□□□□□ -0.66
TUBGCP4-210ENST00000565548 NOD1Q9Y239 953 aa10.94□□□□□ -0.66
TUBGCP4-210ENST00000565548 SOWAHDA6NJG2 315 aa10.93□□□□□ -0.66
TUBGCP4-210ENST00000565548 TLL1O43897 1013 aa10.93□□□□□ -0.66
TUBGCP4-210ENST00000565548 ADH1BP00325 375 aa10.93□□□□□ -0.66
TUBGCP4-210ENST00000565548 ATP1A2P50993 1020 aa10.93□□□□□ -0.66
TUBGCP4-210ENST00000565548 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
TUBGCP4-210ENST00000565548 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
TUBGCP4-210ENST00000565548 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 ZPR1O75312 459 aa10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 SIX5Q8N196 739 aa10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 C1orf216Q8TAB5 229 aa10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 FAM163AQ96GL9 167 aaPredicted RBP10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 ZNF594Q96JF6 807 aaPredicted RBP10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 TOP2AP11388 1531 aaKnown RBP10.92□□□□□ -0.66
TUBGCP4-210ENST00000565548 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms