RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.01
COMMD4-212ENST00000565517 FYB1O15117 783 aa21.38■■□□□ 1.01
COMMD4-212ENST00000565517 LARP1Q6PKG0 1096 aaKnown RBP21.38■■□□□ 1.01
COMMD4-212ENST00000565517 AXIN2Q9Y2T1 843 aa21.38■■□□□ 1.01
COMMD4-212ENST00000565517 CARD14Q9BXL6 1004 aa21.37■■□□□ 1.01
COMMD4-212ENST00000565517 BARGINQ6ZT62 677 aa21.36■■□□□ 1.01
COMMD4-212ENST00000565517 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
COMMD4-212ENST00000565517 THRAP3Q9Y2W1 955 aaKnown RBP21.36■■□□□ 1.01
COMMD4-212ENST00000565517 THSD7AQ9UPZ6 1657 aa21.36■■□□□ 1.01
COMMD4-212ENST00000565517 C11orf95C9JLR9 678 aaPredicted RBP21.35■■□□□ 1.01
COMMD4-212ENST00000565517 CRB1P82279 1406 aa21.35■■□□□ 1.01
COMMD4-212ENST00000565517 TCP11L2Q8N4U5 519 aa21.34■■□□□ 1.01
COMMD4-212ENST00000565517 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
COMMD4-212ENST00000565517 WDR17Q8IZU2 1322 aa21.33■■□□□ 1.01
COMMD4-212ENST00000565517 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
COMMD4-212ENST00000565517 GGNBP2Q9H3C7 697 aa21.33■■□□□ 1.01
COMMD4-212ENST00000565517 A0A0G2JS52 829 aa21.32■■□□□ 1
COMMD4-212ENST00000565517 MYT1Q01538 1121 aa21.32■■□□□ 1
COMMD4-212ENST00000565517 USP35Q9P2H5 1018 aa21.32■■□□□ 1
COMMD4-212ENST00000565517 TOM1L2Q6ZVM7 507 aa21.3■■□□□ 1
COMMD4-212ENST00000565517 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
COMMD4-212ENST00000565517 CCDC125Q86Z20 511 aa21.29■■□□□ 1
COMMD4-212ENST00000565517 IP6K1Q92551 441 aa21.29■■□□□ 1
COMMD4-212ENST00000565517 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
COMMD4-212ENST00000565517 EP400Q96L91 3159 aa21.28■■□□□ 1
COMMD4-212ENST00000565517 CARD10Q9BWT7 1032 aa21.28■■□□□ 1
COMMD4-212ENST00000565517 PANK3Q9H999 370 aa21.28■■□□□ 1
COMMD4-212ENST00000565517 KIF7Q2M1P5 1343 aa21.28■■□□□ 1
COMMD4-212ENST00000565517 MAP3K19Q56UN5 1328 aa21.28■■□□□ 1
COMMD4-212ENST00000565517 PARP4Q9UKK3 1724 aaKnown RBP21.27■■□□□ 1
COMMD4-212ENST00000565517 CSB-PGBD3P0DP91 1061 aa21.27■■□□□ 1
COMMD4-212ENST00000565517 ERBB3P21860 1342 aa21.27■□□□□ 0.99
COMMD4-212ENST00000565517 WNK3Q9BYP7 1800 aa21.26■□□□□ 0.99
COMMD4-212ENST00000565517 ANKRD26Q9UPS8 1709 aa21.25■□□□□ 0.99
COMMD4-212ENST00000565517 CCDC7Q96M83 1385 aa21.24■□□□□ 0.99
COMMD4-212ENST00000565517 FBLN1P23142 703 aa21.24■□□□□ 0.99
COMMD4-212ENST00000565517 AMPHP49418 695 aa21.24■□□□□ 0.99
COMMD4-212ENST00000565517 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
COMMD4-212ENST00000565517 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
COMMD4-212ENST00000565517 RTL1A6NKG5 1358 aa21.23■□□□□ 0.99
COMMD4-212ENST00000565517 HOXC9P31274 260 aa21.23■□□□□ 0.99
COMMD4-212ENST00000565517 ANKRD24Q8TF21 1146 aa21.23■□□□□ 0.99
COMMD4-212ENST00000565517 KIF24Q5T7B8 1368 aa21.23■□□□□ 0.99
COMMD4-212ENST00000565517 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
COMMD4-212ENST00000565517 RRS1Q15050 365 aaKnown RBP21.22■□□□□ 0.99
COMMD4-212ENST00000565517 PDE3BQ13370 1112 aa21.21■□□□□ 0.99
COMMD4-212ENST00000565517 NSD2O96028 1365 aa21.21■□□□□ 0.99
COMMD4-212ENST00000565517 NLRP2Q9NX02 1062 aa21.2■□□□□ 0.98
COMMD4-212ENST00000565517 FAM196AQ6ZSG2 479 aa21.19■□□□□ 0.98
COMMD4-212ENST00000565517 DISP2A7MBM2 1401 aa21.19■□□□□ 0.98
COMMD4-212ENST00000565517 LRRC37A3O60309 1634 aa21.18■□□□□ 0.98
COMMD4-212ENST00000565517 DDB1Q16531 1140 aa21.18■□□□□ 0.98
COMMD4-212ENST00000565517 KNSTRNQ9Y448 316 aa21.18■□□□□ 0.98
COMMD4-212ENST00000565517 WASHC2AQ641Q2 1341 aa21.17■□□□□ 0.98
COMMD4-212ENST00000565517 FLT4P35916 1363 aa21.17■□□□□ 0.98
COMMD4-212ENST00000565517 PEAK1Q9H792 1746 aa21.17■□□□□ 0.98
COMMD4-212ENST00000565517 RGPD1P0DJD0 1748 aa21.16■□□□□ 0.98
COMMD4-212ENST00000565517 INSRP06213 1382 aa21.16■□□□□ 0.98
COMMD4-212ENST00000565517 FAM182BQ5T319 152 aa21.16■□□□□ 0.98
COMMD4-212ENST00000565517 RGPD2P0DJD1 1756 aa21.15■□□□□ 0.98
COMMD4-212ENST00000565517 SF3B2Q13435 895 aaKnown RBP21.15■□□□□ 0.98
COMMD4-212ENST00000565517 LTV1Q96GA3 475 aaPredicted RBP21.15■□□□□ 0.98
COMMD4-212ENST00000565517 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-212ENST00000565517 EXOC5O00471 708 aa21.13■□□□□ 0.97
COMMD4-212ENST00000565517 IL2RBP14784 551 aa21.13■□□□□ 0.97
COMMD4-212ENST00000565517 HSP90AB2PQ58FF8 381 aa21.13■□□□□ 0.97
COMMD4-212ENST00000565517 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
COMMD4-212ENST00000565517 SMG6Q86US8 1419 aaKnown RBP21.12■□□□□ 0.97
COMMD4-212ENST00000565517 AMER1Q5JTC6 1135 aaPredicted RBP21.12■□□□□ 0.97
COMMD4-212ENST00000565517 POLKQ9UBT6 870 aa21.12■□□□□ 0.97
COMMD4-212ENST00000565517 OVOS2A0A0G2JMS6 1433 aa21.11■□□□□ 0.97
COMMD4-212ENST00000565517 SBF2Q86WG5 1849 aa21.11■□□□□ 0.97
COMMD4-212ENST00000565517 TNS1Q9HBL0 1735 aaKnown RBP21.1■□□□□ 0.97
COMMD4-212ENST00000565517 MORC1Q86VD1 984 aa21.1■□□□□ 0.97
COMMD4-212ENST00000565517 TNS2Q63HR2 1409 aa21.1■□□□□ 0.97
COMMD4-212ENST00000565517 BCL9O00512 1426 aa21.09■□□□□ 0.97
COMMD4-212ENST00000565517 PPM1GO15355 546 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-212ENST00000565517 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-212ENST00000565517 BAG6P46379 1132 aa21.08■□□□□ 0.97
COMMD4-212ENST00000565517 NBPF6Q5VWK0 638 aa21.08■□□□□ 0.97
COMMD4-212ENST00000565517 MARCH10Q8NA82 808 aaPredicted RBP21.08■□□□□ 0.97
COMMD4-212ENST00000565517 NBPF4Q96M43 638 aa21.08■□□□□ 0.97
COMMD4-212ENST00000565517 TRIM37O94972 964 aa21.07■□□□□ 0.96
COMMD4-212ENST00000565517 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
COMMD4-212ENST00000565517 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
COMMD4-212ENST00000565517 NCAPD2Q15021 1401 aa21.02■□□□□ 0.96
COMMD4-212ENST00000565517 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
COMMD4-212ENST00000565517 MEGF6O75095 1541 aa21■□□□□ 0.95
COMMD4-212ENST00000565517 APBA3O96018 575 aa21■□□□□ 0.95
COMMD4-212ENST00000565517 USHBP1Q8N6Y0 703 aa21■□□□□ 0.95
COMMD4-212ENST00000565517 RAPGEF4Q8WZA2 1011 aa21■□□□□ 0.95
COMMD4-212ENST00000565517 BCL11BQ9C0K0 894 aaPredicted RBP21■□□□□ 0.95
COMMD4-212ENST00000565517 KAT6BQ8WYB5 2073 aa21■□□□□ 0.95
COMMD4-212ENST00000565517 SHANK3Q9BYB0 1731 aa20.99■□□□□ 0.95
COMMD4-212ENST00000565517 EN1Q05925 392 aaPredicted RBP20.99■□□□□ 0.95
COMMD4-212ENST00000565517 EIF4A2Q14240 407 aaKnown RBP20.99■□□□□ 0.95
COMMD4-212ENST00000565517 CC2D1BQ5T0F9 858 aaKnown RBP20.99■□□□□ 0.95
COMMD4-212ENST00000565517 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
COMMD4-212ENST00000565517 EYA1Q99502 592 aa20.99■□□□□ 0.95
COMMD4-212ENST00000565517 PARD3Q8TEW0 1356 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms