RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 WDR17Q8IZU2 1322 aa30.78■■■□□ 2.52
RPUSD1-206ENST00000565503 CDCA7Q9BWT1 371 aaPredicted RBP30.78■■■□□ 2.52
RPUSD1-206ENST00000565503 RGPD5Q99666 1765 aa30.78■■■□□ 2.52
RPUSD1-206ENST00000565503 NINLQ9Y2I6 1382 aa30.78■■■□□ 2.52
RPUSD1-206ENST00000565503 EVC2Q86UK5 1308 aa30.77■■■□□ 2.52
RPUSD1-206ENST00000565503 BCL9O00512 1426 aa30.77■■■□□ 2.52
RPUSD1-206ENST00000565503 CPSF1Q10570 1443 aaKnown RBP30.77■■■□□ 2.52
RPUSD1-206ENST00000565503 BCL11BQ9C0K0 894 aaPredicted RBP30.77■■■□□ 2.52
RPUSD1-206ENST00000565503 CASZ1Q86V15 1759 aa30.76■■■□□ 2.51
RPUSD1-206ENST00000565503 YY1P25490 414 aa30.75■■■□□ 2.51
RPUSD1-206ENST00000565503 AXIN2Q9Y2T1 843 aa30.74■■■□□ 2.51
RPUSD1-206ENST00000565503 ZNF692Q9BU19 519 aaPredicted RBP30.73■■■□□ 2.51
RPUSD1-206ENST00000565503 ARHGEF25Q86VW2 580 aa30.72■■■□□ 2.51
RPUSD1-206ENST00000565503 KCNH5Q8NCM2 988 aa30.72■■■□□ 2.51
RPUSD1-206ENST00000565503 DCAF8L1A6NGE4 600 aa30.71■■■□□ 2.51
RPUSD1-206ENST00000565503 MARCH10Q8NA82 808 aaPredicted RBP30.7■■■□□ 2.51
RPUSD1-206ENST00000565503 TTC21BQ7Z4L5 1316 aa30.7■■■□□ 2.5
RPUSD1-206ENST00000565503 CARD10Q9BWT7 1032 aa30.69■■■□□ 2.5
RPUSD1-206ENST00000565503 ANO8Q9HCE9 1232 aaPredicted RBP30.69■■■□□ 2.5
RPUSD1-206ENST00000565503 TTC21AQ8NDW8 1320 aa30.69■■■□□ 2.5
RPUSD1-206ENST00000565503 ABCC6O95255 1503 aa30.68■■■□□ 2.5
RPUSD1-206ENST00000565503 L3MBTL2Q969R5 705 aa30.68■■■□□ 2.5
RPUSD1-206ENST00000565503 PTF1AQ7RTS3 328 aa30.67■■■□□ 2.5
RPUSD1-206ENST00000565503 NFAT5O94916 1531 aa30.66■■■□□ 2.5
RPUSD1-206ENST00000565503 CSB-PGBD3P0DP91 1061 aa30.64■■■□□ 2.5
RPUSD1-206ENST00000565503 PROM2Q8N271 834 aa30.64■■■□□ 2.5
RPUSD1-206ENST00000565503 CCDC7Q96M83 1385 aa30.63■■■□□ 2.49
RPUSD1-206ENST00000565503 MON2Q7Z3U7 1717 aa30.62■■■□□ 2.49
RPUSD1-206ENST00000565503 ROCK2O75116 1388 aaKnown RBP30.61■■■□□ 2.49
RPUSD1-206ENST00000565503 EXOC5O00471 708 aa30.6■■■□□ 2.49
RPUSD1-206ENST00000565503 USP54Q70EL1 1684 aa30.59■■■□□ 2.49
RPUSD1-206ENST00000565503 TNS2Q63HR2 1409 aa30.59■■■□□ 2.49
RPUSD1-206ENST00000565503 KTN1Q86UP2 1357 aaKnown RBP30.59■■■□□ 2.49
RPUSD1-206ENST00000565503 SOX12O15370 315 aa30.59■■■□□ 2.49
RPUSD1-206ENST00000565503 MYOM1P52179 1685 aa30.58■■■□□ 2.49
RPUSD1-206ENST00000565503 TXNRD1Q16881 649 aa30.58■■■□□ 2.49
RPUSD1-206ENST00000565503 NHSQ6T4R5 1651 aa30.58■■■□□ 2.49
RPUSD1-206ENST00000565503 PDGFDQ9GZP0 370 aaPredicted RBP30.57■■■□□ 2.48
RPUSD1-206ENST00000565503 STK32BQ9NY57 414 aa30.56■■■□□ 2.48
RPUSD1-206ENST00000565503 ZBTB7AO95365 584 aa30.54■■■□□ 2.48
RPUSD1-206ENST00000565503 LTN1O94822 1766 aa30.54■■■□□ 2.48
RPUSD1-206ENST00000565503 PTGER2P43116 358 aa30.53■■■□□ 2.48
RPUSD1-206ENST00000565503 SLC15A2Q16348 729 aa30.53■■■□□ 2.48
RPUSD1-206ENST00000565503 USP31Q70CQ4 1352 aa30.53■■■□□ 2.48
RPUSD1-206ENST00000565503 KAT6BQ8WYB5 2073 aa30.51■■■□□ 2.47
RPUSD1-206ENST00000565503 SBNO2Q9Y2G9 1366 aa30.51■■■□□ 2.47
RPUSD1-206ENST00000565503 SIN3AQ96ST3 1273 aa30.5■■■□□ 2.47
RPUSD1-206ENST00000565503 ERBB3P21860 1342 aa30.48■■■□□ 2.47
RPUSD1-206ENST00000565503 UTRNP46939 3433 aa30.48■■■□□ 2.47
RPUSD1-206ENST00000565503 ATF5Q9Y2D1 282 aaPredicted RBP30.48■■■□□ 2.47
RPUSD1-206ENST00000565503 BTAF1O14981 1849 aa30.47■■■□□ 2.47
RPUSD1-206ENST00000565503 MTFR1LQ9H019 292 aa30.46■■■□□ 2.47
RPUSD1-206ENST00000565503 PAPPAQ13219 1627 aa30.46■■■□□ 2.47
RPUSD1-206ENST00000565503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.45■■■□□ 2.47
RPUSD1-206ENST00000565503 CHD4Q14839 1912 aa30.45■■■□□ 2.46
RPUSD1-206ENST00000565503 CD163L1Q9NR16 1453 aa30.44■■■□□ 2.46
RPUSD1-206ENST00000565503 NLRP2Q9NX02 1062 aa30.44■■■□□ 2.46
RPUSD1-206ENST00000565503 IL2RBP14784 551 aa30.42■■■□□ 2.46
RPUSD1-206ENST00000565503 NEUROD1Q13562 356 aa30.42■■■□□ 2.46
RPUSD1-206ENST00000565503 NME9Q86XW9 330 aa30.41■■■□□ 2.46
RPUSD1-206ENST00000565503 SGIP1Q9BQI5 828 aa30.41■■■□□ 2.46
RPUSD1-206ENST00000565503 SYT17Q9BSW7 474 aa30.41■■■□□ 2.46
RPUSD1-206ENST00000565503 FHDC1Q9C0D6 1143 aaPredicted RBP30.41■■■□□ 2.46
RPUSD1-206ENST00000565503 ACSBG1Q96GR2 724 aa30.4■■■□□ 2.46
RPUSD1-206ENST00000565503 HDGFL2Q7Z4V5 671 aaPredicted RBP30.38■■■□□ 2.45
RPUSD1-206ENST00000565503 EDC4Q6P2E9 1401 aaKnown RBP30.38■■■□□ 2.45
RPUSD1-206ENST00000565503 FAM208AQ9UK61 1670 aaKnown RBP30.37■■■□□ 2.45
RPUSD1-206ENST00000565503 ANKRD24Q8TF21 1146 aa30.37■■■□□ 2.45
RPUSD1-206ENST00000565503 QSER1Q2KHR3 1735 aa30.35■■■□□ 2.45
RPUSD1-206ENST00000565503 MAP3K5Q99683 1374 aa30.34■■■□□ 2.45
RPUSD1-206ENST00000565503 TMC1Q8TDI8 760 aa30.34■■■□□ 2.45
RPUSD1-206ENST00000565503 ARXQ96QS3 562 aa30.33■■■□□ 2.45
RPUSD1-206ENST00000565503 CARD11Q9BXL7 1154 aa30.33■■■□□ 2.45
RPUSD1-206ENST00000565503 ZNF784Q8NCA9 323 aaPredicted RBP30.32■■■□□ 2.44
RPUSD1-206ENST00000565503 SLC12A5Q9H2X9 1139 aa30.31■■■□□ 2.44
RPUSD1-206ENST00000565503 TERF2IPQ9NYB0 399 aa30.31■■■□□ 2.44
RPUSD1-206ENST00000565503 A0A1W2PP64 1363 aa30.29■■■□□ 2.44
RPUSD1-206ENST00000565503 PUS7Q96PZ0 661 aaKnown RBP30.29■■■□□ 2.44
RPUSD1-206ENST00000565503 ZNF827Q17R98 1081 aa30.28■■■□□ 2.44
RPUSD1-206ENST00000565503 LRRC4BQ9NT99 713 aa30.28■■■□□ 2.44
RPUSD1-206ENST00000565503 COL24A1Q17RW2 1714 aa30.27■■■□□ 2.44
RPUSD1-206ENST00000565503 IP6K1Q92551 441 aa30.27■■■□□ 2.44
RPUSD1-206ENST00000565503 SLC27A3Q5K4L6 730 aa30.26■■■□□ 2.43
RPUSD1-206ENST00000565503 SLC16A10Q8TF71 515 aa30.24■■■□□ 2.43
RPUSD1-206ENST00000565503 AKT1S1Q96B36 256 aa30.24■■■□□ 2.43
RPUSD1-206ENST00000565503 TUBGCP6Q96RT7 1819 aa30.23■■■□□ 2.43
RPUSD1-206ENST00000565503 LY75O60449 1722 aa30.22■■■□□ 2.43
RPUSD1-206ENST00000565503 DDX54Q8TDD1 881 aaKnown RBP30.21■■■□□ 2.43
RPUSD1-206ENST00000565503 DOT1LQ8TEK3 1739 aa30.21■■■□□ 2.43
RPUSD1-206ENST00000565503 SHANK3Q9BYB0 1731 aa30.19■■■□□ 2.42
RPUSD1-206ENST00000565503 RGPD2P0DJD1 1756 aa30.18■■■□□ 2.42
RPUSD1-206ENST00000565503 GOLGB1Q14789 3259 aaKnown RBP30.18■■■□□ 2.42
RPUSD1-206ENST00000565503 ANKRD36BQ8N2N9 1353 aa30.17■■■□□ 2.42
RPUSD1-206ENST00000565503 LTV1Q96GA3 475 aaPredicted RBP30.17■■■□□ 2.42
RPUSD1-206ENST00000565503 POLD1P28340 1107 aa30.16■■■□□ 2.42
RPUSD1-206ENST00000565503 PNPLA7Q6ZV29 1317 aa30.16■■■□□ 2.42
RPUSD1-206ENST00000565503 COG3Q96JB2 828 aa30.15■■■□□ 2.42
RPUSD1-206ENST00000565503 HOXC9P31274 260 aa30.14■■■□□ 2.42
RPUSD1-206ENST00000565503 MAP3K19Q56UN5 1328 aa30.14■■■□□ 2.42
RPUSD1-206ENST00000565503 PRIM1P49642 420 aaKnown RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms