RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 TMED8Q6PL24 325 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-214ENST00000565274 PCDHGC3Q9UN70 934 aa7.11□□□□□ -1.27
CAPN3-214ENST00000565274 EFCAB5A4FU69 1503 aa7.11□□□□□ -1.27
CAPN3-214ENST00000565274 LRRC9Q6ZRR7 1453 aa7.11□□□□□ -1.27
CAPN3-214ENST00000565274 CAPN5O15484 640 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-214ENST00000565274 DNMBPQ6XZF7 1577 aa7.1□□□□□ -1.27
CAPN3-214ENST00000565274 FANCD2Q9BXW9 1451 aa7.1□□□□□ -1.27
CAPN3-214ENST00000565274 SIAH2O43255 324 aa7.09□□□□□ -1.27
CAPN3-214ENST00000565274 MS4A1P11836 297 aa7.09□□□□□ -1.27
CAPN3-214ENST00000565274 NDUFV2P19404 249 aa7.09□□□□□ -1.27
CAPN3-214ENST00000565274 SH3BP2P78314 561 aa7.09□□□□□ -1.27
CAPN3-214ENST00000565274 ARID3AQ99856 593 aa7.09□□□□□ -1.27
CAPN3-214ENST00000565274 CCNYL3P0C7X3 344 aa7.08□□□□□ -1.28
CAPN3-214ENST00000565274 SSTR3P32745 418 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-214ENST00000565274 VEGFBP49765 207 aa7.08□□□□□ -1.28
CAPN3-214ENST00000565274 TRIM46Q7Z4K8 759 aa7.08□□□□□ -1.28
CAPN3-214ENST00000565274 CASKIN1Q8WXD9 1431 aa7.08□□□□□ -1.28
CAPN3-214ENST00000565274 FYCO1Q9BQS8 1478 aa7.07□□□□□ -1.28
CAPN3-214ENST00000565274 SLC16A10Q8TF71 515 aa7.07□□□□□ -1.28
CAPN3-214ENST00000565274 SPIRE2Q8WWL2 714 aa7.07□□□□□ -1.28
CAPN3-214ENST00000565274 BAP1Q92560 729 aa7.07□□□□□ -1.28
CAPN3-214ENST00000565274 TLL2Q9Y6L7 1015 aa7.07□□□□□ -1.28
CAPN3-214ENST00000565274 SETD5Q9C0A6 1442 aa7.07□□□□□ -1.28
CAPN3-214ENST00000565274 TOPBP1Q92547 1522 aa7.06□□□□□ -1.28
CAPN3-214ENST00000565274 CUL7Q14999 1698 aa7.06□□□□□ -1.28
CAPN3-214ENST00000565274 MOXD2PA6NHM9 499 aa7.06□□□□□ -1.28
CAPN3-214ENST00000565274 TTLL12Q14166 644 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-214ENST00000565274 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
CAPN3-214ENST00000565274 CERS3Q8IU89 383 aa7.06□□□□□ -1.28
CAPN3-214ENST00000565274 UNC93B1Q9H1C4 597 aa7.06□□□□□ -1.28
CAPN3-214ENST00000565274 NXF1Q9UBU9 619 aaKnown RBP7.06□□□□□ -1.28
CAPN3-214ENST00000565274 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
CAPN3-214ENST00000565274 POLA1P09884 1462 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-214ENST00000565274 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
CAPN3-214ENST00000565274 PRR7Q8TB68 274 aa7.05□□□□□ -1.28
CAPN3-214ENST00000565274 PSMD1Q99460 953 aa7.05□□□□□ -1.28
CAPN3-214ENST00000565274 C1orf115Q9H7X2 142 aa7.05□□□□□ -1.28
CAPN3-214ENST00000565274 CFAP43Q8NDM7 1665 aa7.05□□□□□ -1.28
CAPN3-214ENST00000565274 PHLDB1Q86UU1 1377 aa7.05□□□□□ -1.28
CAPN3-214ENST00000565274 RAB3GAP2Q9H2M9 1393 aa7.05□□□□□ -1.28
CAPN3-214ENST00000565274 LAMC3Q9Y6N6 1575 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 FMN1Q68DA7 1419 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 GMPRP36959 345 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 PTPRNQ16849 979 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 EVA1BQ9NVM1 165 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 MAPKBP1O60336 1514 aa7.04□□□□□ -1.28
CAPN3-214ENST00000565274 CTHP32929 405 aa7.03□□□□□ -1.28
CAPN3-214ENST00000565274 KCNH2Q12809 1159 aa7.03□□□□□ -1.28
CAPN3-214ENST00000565274 TEX2Q8IWB9 1127 aa7.03□□□□□ -1.28
CAPN3-214ENST00000565274 ZFP42Q96MM3 310 aa7.03□□□□□ -1.28
CAPN3-214ENST00000565274 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
CAPN3-214ENST00000565274 THOC2Q8NI27 1593 aaKnown RBP7.03□□□□□ -1.28
CAPN3-214ENST00000565274 DEKP35659 375 aaKnown RBP7.02□□□□□ -1.29
CAPN3-214ENST00000565274 NNTQ13423 1086 aa7.02□□□□□ -1.29
CAPN3-214ENST00000565274 MTMR2Q13614 643 aa7.02□□□□□ -1.29
CAPN3-214ENST00000565274 ZNF428Q96B54 188 aa7.02□□□□□ -1.29
CAPN3-214ENST00000565274 PRDM16Q9HAZ2 1276 aa7.02□□□□□ -1.29
CAPN3-214ENST00000565274 CWC22Q9HCG8 908 aaKnown RBP7.02□□□□□ -1.29
CAPN3-214ENST00000565274 ZNF511Q8NB15 262 aa7.01□□□□□ -1.29
CAPN3-214ENST00000565274 IRF7Q92985 503 aa7.01□□□□□ -1.29
CAPN3-214ENST00000565274 NAP1L2Q9ULW6 460 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-214ENST00000565274 SAMD9Q5K651 1589 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 SNAPC4Q5SXM2 1469 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 RAD54L2Q9Y4B4 1467 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 PLEKHG3A1L390 1219 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 SOBPA7XYQ1 873 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 VARSP26640 1264 aaKnown RBP7□□□□□ -1.29
CAPN3-214ENST00000565274 WDR4P57081 412 aaKnown RBP7□□□□□ -1.29
CAPN3-214ENST00000565274 ARID5BQ14865 1188 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 GIGYF2Q6Y7W6 1299 aaKnown RBP7□□□□□ -1.29
CAPN3-214ENST00000565274 CNPY4Q8N129 248 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
CAPN3-214ENST00000565274 BEGAINQ9BUH8 593 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 WDR97A6NE52 1622 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 ABCA5Q8WWZ7 1642 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 PDS5BQ9NTI5 1447 aa7□□□□□ -1.29
CAPN3-214ENST00000565274 PCF11O94913 1555 aaKnown RBP6.99□□□□□ -1.29
CAPN3-214ENST00000565274 SCARF1Q14162 830 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 GLIPR1L2Q4G1C9 344 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 FAM177A1Q8N128 213 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-214ENST00000565274 ZSCAN1Q8NBB4 408 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 PRDM10Q9NQV6 1147 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 URB2Q14146 1524 aaKnown RBP6.99□□□□□ -1.29
CAPN3-214ENST00000565274 HFM1A2PYH4 1435 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 FGD6Q6ZV73 1430 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 ERBB4Q15303 1308 aa6.99□□□□□ -1.29
CAPN3-214ENST00000565274 ARHGEF11O15085 1522 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 H3BM21 787 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 PPP1R15AO75807 674 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-214ENST00000565274 BRPF1P55201 1214 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-214ENST00000565274 MRPL14Q6P1L8 145 aaKnown RBP6.98□□□□□ -1.29
CAPN3-214ENST00000565274 IPO4Q8TEX9 1081 aaKnown RBP6.98□□□□□ -1.29
CAPN3-214ENST00000565274 TBC1D2Q9BYX2 928 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 AKNAQ7Z591 1439 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 GRIN2BQ13224 1484 aa6.98□□□□□ -1.29
CAPN3-214ENST00000565274 SPDYE5A6NIY4 337 aa6.97□□□□□ -1.29
CAPN3-214ENST00000565274 RAD21O60216 631 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms