RNA–Protein interactions for RNA: ENST00000565264.1

SIN3A-206, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 510 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-206ENST00000565264 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
SIN3A-206ENST00000565264 NME9Q86XW9 330 aa23.17■■□□□ 1.3
SIN3A-206ENST00000565264 KCNH5Q8NCM2 988 aa23.17■■□□□ 1.3
SIN3A-206ENST00000565264 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
SIN3A-206ENST00000565264 APBA3O96018 575 aa23.15■■□□□ 1.3
SIN3A-206ENST00000565264 WDR17Q8IZU2 1322 aa23.14■■□□□ 1.3
SIN3A-206ENST00000565264 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
SIN3A-206ENST00000565264 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
SIN3A-206ENST00000565264 WNK3Q9BYP7 1800 aa23.13■■□□□ 1.29
SIN3A-206ENST00000565264 CSB-PGBD3P0DP91 1061 aa23.13■■□□□ 1.29
SIN3A-206ENST00000565264 TESK2Q96S53 571 aa23.13■■□□□ 1.29
SIN3A-206ENST00000565264 HDGFL2Q7Z4V5 671 aaPredicted RBP23.12■■□□□ 1.29
SIN3A-206ENST00000565264 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
SIN3A-206ENST00000565264 R3HDM1Q15032 1099 aaKnown RBP23.11■■□□□ 1.29
SIN3A-206ENST00000565264 USP31Q70CQ4 1352 aa23.11■■□□□ 1.29
SIN3A-206ENST00000565264 USP54Q70EL1 1684 aa23.1■■□□□ 1.29
SIN3A-206ENST00000565264 PEAK1Q9H792 1746 aa23.1■■□□□ 1.29
SIN3A-206ENST00000565264 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
SIN3A-206ENST00000565264 DDB1Q16531 1140 aa23.09■■□□□ 1.29
SIN3A-206ENST00000565264 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.28
SIN3A-206ENST00000565264 OVOS2A0A0J9YW53 1432 aa23.08■■□□□ 1.28
SIN3A-206ENST00000565264 OVOS2Q6IE36 1432 aa23.08■■□□□ 1.28
SIN3A-206ENST00000565264 LTN1O94822 1766 aa23.07■■□□□ 1.28
SIN3A-206ENST00000565264 TERF2IPQ9NYB0 399 aa23.07■■□□□ 1.28
SIN3A-206ENST00000565264 RREB1Q92766 1687 aa23.06■■□□□ 1.28
SIN3A-206ENST00000565264 LRP5O75197 1615 aa23.06■■□□□ 1.28
SIN3A-206ENST00000565264 ABCC6O95255 1503 aa23.05■■□□□ 1.28
SIN3A-206ENST00000565264 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
SIN3A-206ENST00000565264 NUP188Q5SRE5 1749 aa23.05■■□□□ 1.28
SIN3A-206ENST00000565264 USP47Q96K76 1375 aa23.04■■□□□ 1.28
SIN3A-206ENST00000565264 PTF1AQ7RTS3 328 aa23.04■■□□□ 1.28
SIN3A-206ENST00000565264 MARCH10Q8NA82 808 aaPredicted RBP23.04■■□□□ 1.28
SIN3A-206ENST00000565264 PUS7Q96PZ0 661 aaKnown RBP23.03■■□□□ 1.28
SIN3A-206ENST00000565264 SBF2Q86WG5 1849 aa23.03■■□□□ 1.28
SIN3A-206ENST00000565264 PARD3Q8TEW0 1356 aa23.02■■□□□ 1.28
SIN3A-206ENST00000565264 ERBB3P21860 1342 aa23.01■■□□□ 1.27
SIN3A-206ENST00000565264 CDCA7Q9BWT1 371 aaPredicted RBP23■■□□□ 1.27
SIN3A-206ENST00000565264 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
SIN3A-206ENST00000565264 CCDC7Q96M83 1385 aa23■■□□□ 1.27
SIN3A-206ENST00000565264 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
SIN3A-206ENST00000565264 PCGF6Q9BYE7 350 aa22.99■■□□□ 1.27
SIN3A-206ENST00000565264 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
SIN3A-206ENST00000565264 FBLN1P23142 703 aa22.97■■□□□ 1.27
SIN3A-206ENST00000565264 TNS2Q63HR2 1409 aa22.97■■□□□ 1.27
SIN3A-206ENST00000565264 C11orf95C9JLR9 678 aaPredicted RBP22.96■■□□□ 1.27
SIN3A-206ENST00000565264 EXOC5O00471 708 aa22.96■■□□□ 1.27
SIN3A-206ENST00000565264 TMF1P82094 1093 aa22.95■■□□□ 1.26
SIN3A-206ENST00000565264 ANKRD36BQ8N2N9 1353 aa22.95■■□□□ 1.26
SIN3A-206ENST00000565264 LTV1Q96GA3 475 aaPredicted RBP22.95■■□□□ 1.26
SIN3A-206ENST00000565264 COG3Q96JB2 828 aa22.94■■□□□ 1.26
SIN3A-206ENST00000565264 BCL11BQ9C0K0 894 aaPredicted RBP22.94■■□□□ 1.26
SIN3A-206ENST00000565264 NBPF14Q5TI25 921 aa22.93■■□□□ 1.26
SIN3A-206ENST00000565264 BCL9O00512 1426 aa22.91■■□□□ 1.26
SIN3A-206ENST00000565264 RGPD3A6NKT7 1758 aaPredicted RBP22.91■■□□□ 1.26
SIN3A-206ENST00000565264 RGPD4Q7Z3J3 1758 aa22.91■■□□□ 1.26
SIN3A-206ENST00000565264 MAP3K19Q56UN5 1328 aa22.91■■□□□ 1.26
SIN3A-206ENST00000565264 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
SIN3A-206ENST00000565264 IL2RBP14784 551 aa22.91■■□□□ 1.26
SIN3A-206ENST00000565264 KCNQ2O43526 872 aa22.9■■□□□ 1.26
SIN3A-206ENST00000565264 IP6K1Q92551 441 aa22.9■■□□□ 1.26
SIN3A-206ENST00000565264 ACSBG1Q96GR2 724 aa22.9■■□□□ 1.26
SIN3A-206ENST00000565264 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
SIN3A-206ENST00000565264 PLSCR1O15162 318 aa22.89■■□□□ 1.25
SIN3A-206ENST00000565264 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
SIN3A-206ENST00000565264 HOXC9P31274 260 aa22.87■■□□□ 1.25
SIN3A-206ENST00000565264 AMPHP49418 695 aa22.87■■□□□ 1.25
SIN3A-206ENST00000565264 RRS1Q15050 365 aaKnown RBP22.87■■□□□ 1.25
SIN3A-206ENST00000565264 PROM2Q8N271 834 aa22.87■■□□□ 1.25
SIN3A-206ENST00000565264 MYOM1P52179 1685 aa22.87■■□□□ 1.25
SIN3A-206ENST00000565264 FYB1O15117 783 aa22.86■■□□□ 1.25
SIN3A-206ENST00000565264 NHSQ6T4R5 1651 aa22.86■■□□□ 1.25
SIN3A-206ENST00000565264 FAM208AQ9UK61 1670 aaKnown RBP22.85■■□□□ 1.25
SIN3A-206ENST00000565264 RGPD2P0DJD1 1756 aa22.85■■□□□ 1.25
SIN3A-206ENST00000565264 KIF20BQ96Q89 1820 aa22.85■■□□□ 1.25
SIN3A-206ENST00000565264 TXNRD1Q16881 649 aa22.82■■□□□ 1.24
SIN3A-206ENST00000565264 CDCA8Q53HL2 280 aa22.82■■□□□ 1.24
SIN3A-206ENST00000565264 TIMELESSQ9UNS1 1208 aa22.82■■□□□ 1.24
SIN3A-206ENST00000565264 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
SIN3A-206ENST00000565264 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
SIN3A-206ENST00000565264 PDGFDQ9GZP0 370 aaPredicted RBP22.81■■□□□ 1.24
SIN3A-206ENST00000565264 DDX54Q8TDD1 881 aaKnown RBP22.8■■□□□ 1.24
SIN3A-206ENST00000565264 NSD3Q9BZ95 1437 aa22.8■■□□□ 1.24
SIN3A-206ENST00000565264 RTL1A6NKG5 1358 aa22.79■■□□□ 1.24
SIN3A-206ENST00000565264 USHBP1Q8N6Y0 703 aa22.79■■□□□ 1.24
SIN3A-206ENST00000565264 BTAF1O14981 1849 aa22.79■■□□□ 1.24
SIN3A-206ENST00000565264 MEGF6O75095 1541 aa22.78■■□□□ 1.24
SIN3A-206ENST00000565264 POLR3GLQ9BT43 218 aa22.78■■□□□ 1.24
SIN3A-206ENST00000565264 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
SIN3A-206ENST00000565264 CASZ1Q86V15 1759 aa22.78■■□□□ 1.24
SIN3A-206ENST00000565264 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
SIN3A-206ENST00000565264 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
SIN3A-206ENST00000565264 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
SIN3A-206ENST00000565264 SHANK3Q9BYB0 1731 aa22.76■■□□□ 1.23
SIN3A-206ENST00000565264 HSP90AB2PQ58FF8 381 aa22.75■■□□□ 1.23
SIN3A-206ENST00000565264 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
SIN3A-206ENST00000565264 STK32BQ9NY57 414 aa22.74■■□□□ 1.23
SIN3A-206ENST00000565264 ZBTB7AO95365 584 aa22.73■■□□□ 1.23
SIN3A-206ENST00000565264 PPP1R1BQ9UD71 204 aaPredicted RBP22.73■■□□□ 1.23
SIN3A-206ENST00000565264 DOT1LQ8TEK3 1739 aa22.73■■□□□ 1.23
SIN3A-206ENST00000565264 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms