RNA–Protein interactions for RNA: ENST00000565253.1

C16orf46-204, Transcript of chromosome 16 open reading frame 46, humanhuman

TSL 3

Gene C16orf46, Length 479 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf46-204ENST00000565253 CDK19Q9BWU1 502 aa23.68■■□□□ 1.38
C16orf46-204ENST00000565253 ITSN1Q15811 1721 aa23.67■■□□□ 1.38
C16orf46-204ENST00000565253 CEP350Q5VT06 3117 aa23.67■■□□□ 1.38
C16orf46-204ENST00000565253 LMO7Q8WWI1 1683 aa23.67■■□□□ 1.38
C16orf46-204ENST00000565253 ZBTB7CA1YPR0 619 aa23.66■■□□□ 1.38
C16orf46-204ENST00000565253 CHD4Q14839 1912 aa23.65■■□□□ 1.38
C16orf46-204ENST00000565253 PTF1AQ7RTS3 328 aa23.65■■□□□ 1.38
C16orf46-204ENST00000565253 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
C16orf46-204ENST00000565253 AATKQ6ZMQ8 1374 aa23.65■■□□□ 1.38
C16orf46-204ENST00000565253 PEAK1Q9H792 1746 aa23.64■■□□□ 1.38
C16orf46-204ENST00000565253 BRD4O60885 1362 aaPredicted RBP23.63■■□□□ 1.37
C16orf46-204ENST00000565253 KDM2AQ9Y2K7 1162 aa23.62■■□□□ 1.37
C16orf46-204ENST00000565253 EXOC5O00471 708 aa23.61■■□□□ 1.37
C16orf46-204ENST00000565253 POLD1P28340 1107 aa23.6■■□□□ 1.37
C16orf46-204ENST00000565253 DCAF11Q8TEB1 546 aa23.6■■□□□ 1.37
C16orf46-204ENST00000565253 WDR17Q8IZU2 1322 aa23.59■■□□□ 1.37
C16orf46-204ENST00000565253 PELP1Q8IZL8 1130 aaKnown RBP23.59■■□□□ 1.37
C16orf46-204ENST00000565253 LRRC37A3O60309 1634 aa23.58■■□□□ 1.36
C16orf46-204ENST00000565253 NLRP6P59044 892 aa23.57■■□□□ 1.36
C16orf46-204ENST00000565253 SLC16A10Q8TF71 515 aa23.57■■□□□ 1.36
C16orf46-204ENST00000565253 GRIN3BO60391 1043 aa23.56■■□□□ 1.36
C16orf46-204ENST00000565253 CSB-PGBD3P0DP91 1061 aa23.56■■□□□ 1.36
C16orf46-204ENST00000565253 KLHL34Q8N239 644 aa23.56■■□□□ 1.36
C16orf46-204ENST00000565253 SBF2Q86WG5 1849 aa23.54■■□□□ 1.36
C16orf46-204ENST00000565253 CARD10Q9BWT7 1032 aa23.54■■□□□ 1.36
C16orf46-204ENST00000565253 SRPK2P78362 688 aaKnown RBP23.52■■□□□ 1.36
C16orf46-204ENST00000565253 KCNH5Q8NCM2 988 aa23.49■■□□□ 1.35
C16orf46-204ENST00000565253 PPIP5K1Q6PFW1 1433 aa23.49■■□□□ 1.35
C16orf46-204ENST00000565253 AXIN2Q9Y2T1 843 aa23.48■■□□□ 1.35
C16orf46-204ENST00000565253 CCDC7Q96M83 1385 aa23.48■■□□□ 1.35
C16orf46-204ENST00000565253 TOPAZ1Q8N9V7 1692 aa23.47■■□□□ 1.35
C16orf46-204ENST00000565253 GOLGB1Q14789 3259 aaKnown RBP23.46■■□□□ 1.35
C16orf46-204ENST00000565253 HSPA6P17066 643 aa23.45■■□□□ 1.34
C16orf46-204ENST00000565253 GPBP1L1Q9HC44 474 aaPredicted RBP23.45■■□□□ 1.34
C16orf46-204ENST00000565253 ARHGEF28Q8N1W1 1705 aaKnown RBP23.43■■□□□ 1.34
C16orf46-204ENST00000565253 SLC27A3Q5K4L6 730 aa23.43■■□□□ 1.34
C16orf46-204ENST00000565253 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
C16orf46-204ENST00000565253 ACSBG1Q96GR2 724 aa23.43■■□□□ 1.34
C16orf46-204ENST00000565253 SLIT3O75094 1523 aa23.43■■□□□ 1.34
C16orf46-204ENST00000565253 CPSF1Q10570 1443 aaKnown RBP23.42■■□□□ 1.34
C16orf46-204ENST00000565253 AKAP12Q02952 1782 aa23.42■■□□□ 1.34
C16orf46-204ENST00000565253 ZNF827Q17R98 1081 aa23.42■■□□□ 1.34
C16orf46-204ENST00000565253 USP6P35125 1406 aa23.42■■□□□ 1.34
C16orf46-204ENST00000565253 TNS2Q63HR2 1409 aa23.42■■□□□ 1.34
C16orf46-204ENST00000565253 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
C16orf46-204ENST00000565253 TFCP2L1Q9NZI6 479 aa23.4■■□□□ 1.34
C16orf46-204ENST00000565253 CABP1Q9NZU7 370 aa23.4■■□□□ 1.34
C16orf46-204ENST00000565253 SHANK3Q9BYB0 1731 aa23.39■■□□□ 1.33
C16orf46-204ENST00000565253 NLGN2Q8NFZ4 835 aa23.38■■□□□ 1.33
C16orf46-204ENST00000565253 AKT1S1Q96B36 256 aa23.38■■□□□ 1.33
C16orf46-204ENST00000565253 ATP10DQ9P241 1426 aa23.38■■□□□ 1.33
C16orf46-204ENST00000565253 ZNF692Q9BU19 519 aaPredicted RBP23.36■■□□□ 1.33
C16orf46-204ENST00000565253 LRRC4BQ9NT99 713 aa23.36■■□□□ 1.33
C16orf46-204ENST00000565253 PAPPAQ13219 1627 aa23.35■■□□□ 1.33
C16orf46-204ENST00000565253 NHSQ6T4R5 1651 aa23.35■■□□□ 1.33
C16orf46-204ENST00000565253 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
C16orf46-204ENST00000565253 WNK3Q9BYP7 1800 aa23.34■■□□□ 1.33
C16orf46-204ENST00000565253 SOX12O15370 315 aa23.34■■□□□ 1.33
C16orf46-204ENST00000565253 IL2RBP14784 551 aa23.34■■□□□ 1.33
C16orf46-204ENST00000565253 YBX3P16989 372 aaKnown RBP eCLIP23.34■■□□□ 1.33
C16orf46-204ENST00000565253 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.33
C16orf46-204ENST00000565253 NLRP2Q9NX02 1062 aa23.32■■□□□ 1.32
C16orf46-204ENST00000565253 COL18A1P39060 1754 aa23.32■■□□□ 1.32
C16orf46-204ENST00000565253 ABCC6O95255 1503 aa23.31■■□□□ 1.32
C16orf46-204ENST00000565253 TTC21AQ8NDW8 1320 aa23.3■■□□□ 1.32
C16orf46-204ENST00000565253 TRPM1Q7Z4N2 1603 aa23.3■■□□□ 1.32
C16orf46-204ENST00000565253 HMGB2P26583 209 aaKnown RBP23.29■■□□□ 1.32
C16orf46-204ENST00000565253 MSH5O43196 834 aa23.28■■□□□ 1.32
C16orf46-204ENST00000565253 TTC21BQ7Z4L5 1316 aa23.28■■□□□ 1.32
C16orf46-204ENST00000565253 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
C16orf46-204ENST00000565253 APLP1P51693 650 aa23.26■■□□□ 1.31
C16orf46-204ENST00000565253 CD2APQ9Y5K6 639 aa23.26■■□□□ 1.31
C16orf46-204ENST00000565253 ERBB3P21860 1342 aa23.25■■□□□ 1.31
C16orf46-204ENST00000565253 EVC2Q86UK5 1308 aa23.25■■□□□ 1.31
C16orf46-204ENST00000565253 PIK3C2AO00443 1686 aa23.22■■□□□ 1.31
C16orf46-204ENST00000565253 SYTL4Q96C24 671 aaPredicted RBP23.22■■□□□ 1.31
C16orf46-204ENST00000565253 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
C16orf46-204ENST00000565253 NBPF1Q3BBV0 1214 aa23.21■■□□□ 1.31
C16orf46-204ENST00000565253 ADCY9O60503 1353 aa23.21■■□□□ 1.31
C16orf46-204ENST00000565253 BTAF1O14981 1849 aa23.2■■□□□ 1.3
C16orf46-204ENST00000565253 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
C16orf46-204ENST00000565253 QSER1Q2KHR3 1735 aa23.19■■□□□ 1.3
C16orf46-204ENST00000565253 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
C16orf46-204ENST00000565253 CCNL1Q9UK58 526 aaPredicted RBP23.19■■□□□ 1.3
C16orf46-204ENST00000565253 COL24A1Q17RW2 1714 aa23.19■■□□□ 1.3
C16orf46-204ENST00000565253 FLAD1Q8NFF5 587 aa23.18■■□□□ 1.3
C16orf46-204ENST00000565253 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
C16orf46-204ENST00000565253 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
C16orf46-204ENST00000565253 PRIM1P49642 420 aaKnown RBP23.16■■□□□ 1.3
C16orf46-204ENST00000565253 COL23A1Q86Y22 540 aaPredicted RBP23.16■■□□□ 1.3
C16orf46-204ENST00000565253 NFAT5O94916 1531 aa23.16■■□□□ 1.3
C16orf46-204ENST00000565253 KCNQ4P56696 695 aa23.15■■□□□ 1.3
C16orf46-204ENST00000565253 KTN1Q86UP2 1357 aaKnown RBP23.14■■□□□ 1.3
C16orf46-204ENST00000565253 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.3
C16orf46-204ENST00000565253 KIF3CO14782 793 aa23.13■■□□□ 1.29
C16orf46-204ENST00000565253 MSL1Q68DK7 614 aa23.13■■□□□ 1.29
C16orf46-204ENST00000565253 RGPD5Q99666 1765 aa23.12■■□□□ 1.29
C16orf46-204ENST00000565253 TOMM70O94826 608 aa23.12■■□□□ 1.29
C16orf46-204ENST00000565253 USP47Q96K76 1375 aa23.11■■□□□ 1.29
C16orf46-204ENST00000565253 DNAJC5GQ8N7S2 189 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms