RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TMC1Q8TDI8 760 aa20.85■□□□□ 0.93
USB1-210ENST00000565151 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
USB1-210ENST00000565151 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
USB1-210ENST00000565151 EN1Q05925 392 aaPredicted RBP20.81■□□□□ 0.92
USB1-210ENST00000565151 SF3B2Q13435 895 aaKnown RBP20.8■□□□□ 0.92
USB1-210ENST00000565151 KCNH5Q8NCM2 988 aa20.8■□□□□ 0.92
USB1-210ENST00000565151 THRAP3Q9Y2W1 955 aaKnown RBP20.8■□□□□ 0.92
USB1-210ENST00000565151 USP47Q96K76 1375 aa20.8■□□□□ 0.92
USB1-210ENST00000565151 WDR17Q8IZU2 1322 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 OVOS2A0A0J9YW53 1432 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 OVOS2Q6IE36 1432 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 TRIM37O94972 964 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 PCGF6Q9BYE7 350 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 RREB1Q92766 1687 aa20.79■□□□□ 0.92
USB1-210ENST00000565151 MYOM1P52179 1685 aa20.78■□□□□ 0.92
USB1-210ENST00000565151 ABCC6O95255 1503 aa20.78■□□□□ 0.92
USB1-210ENST00000565151 FAM196AQ6ZSG2 479 aa20.77■□□□□ 0.92
USB1-210ENST00000565151 RGPD2P0DJD1 1756 aa20.77■□□□□ 0.91
USB1-210ENST00000565151 NUP188Q5SRE5 1749 aa20.76■□□□□ 0.91
USB1-210ENST00000565151 BAG6P46379 1132 aa20.76■□□□□ 0.91
USB1-210ENST00000565151 TOM1L2Q6ZVM7 507 aa20.76■□□□□ 0.91
USB1-210ENST00000565151 HDGFL2Q7Z4V5 671 aaPredicted RBP20.76■□□□□ 0.91
USB1-210ENST00000565151 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
USB1-210ENST00000565151 EZH2Q15910 746 aaKnown RBP20.75■□□□□ 0.91
USB1-210ENST00000565151 CAMKK2Q96RR4 588 aa20.74■□□□□ 0.91
USB1-210ENST00000565151 TERF2IPQ9NYB0 399 aa20.74■□□□□ 0.91
USB1-210ENST00000565151 FBLN1P23142 703 aa20.73■□□□□ 0.91
USB1-210ENST00000565151 PTF1AQ7RTS3 328 aa20.73■□□□□ 0.91
USB1-210ENST00000565151 CARD10Q9BWT7 1032 aa20.73■□□□□ 0.91
USB1-210ENST00000565151 PSDA5PKW4 1024 aaPredicted RBP20.72■□□□□ 0.91
USB1-210ENST00000565151 NINLQ9Y2I6 1382 aa20.72■□□□□ 0.91
USB1-210ENST00000565151 KIF20BQ96Q89 1820 aa20.71■□□□□ 0.91
USB1-210ENST00000565151 MARCH10Q8NA82 808 aaPredicted RBP20.7■□□□□ 0.9
USB1-210ENST00000565151 CLSPNQ9HAW4 1339 aa20.7■□□□□ 0.9
USB1-210ENST00000565151 ANKRD36BQ8N2N9 1353 aa20.7■□□□□ 0.9
USB1-210ENST00000565151 APBA3O96018 575 aa20.69■□□□□ 0.9
USB1-210ENST00000565151 ERBB3P21860 1342 aa20.69■□□□□ 0.9
USB1-210ENST00000565151 LRP5O75197 1615 aa20.68■□□□□ 0.9
USB1-210ENST00000565151 DDB1Q16531 1140 aa20.68■□□□□ 0.9
USB1-210ENST00000565151 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
USB1-210ENST00000565151 OVOS2A0A0G2JMS6 1433 aa20.68■□□□□ 0.9
USB1-210ENST00000565151 RGPD3A6NKT7 1758 aaPredicted RBP20.67■□□□□ 0.9
USB1-210ENST00000565151 RGPD4Q7Z3J3 1758 aa20.67■□□□□ 0.9
USB1-210ENST00000565151 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
USB1-210ENST00000565151 TMF1P82094 1093 aa20.67■□□□□ 0.9
USB1-210ENST00000565151 FAM208AQ9UK61 1670 aaKnown RBP20.66■□□□□ 0.9
USB1-210ENST00000565151 ANKRD24Q8TF21 1146 aa20.65■□□□□ 0.9
USB1-210ENST00000565151 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.9
USB1-210ENST00000565151 CCDC7Q96M83 1385 aa20.64■□□□□ 0.89
USB1-210ENST00000565151 FYB1O15117 783 aa20.64■□□□□ 0.89
USB1-210ENST00000565151 R3HDM1Q15032 1099 aaKnown RBP20.64■□□□□ 0.89
USB1-210ENST00000565151 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
USB1-210ENST00000565151 KAT6BQ8WYB5 2073 aa20.64■□□□□ 0.89
USB1-210ENST00000565151 MAP3K19Q56UN5 1328 aa20.63■□□□□ 0.89
USB1-210ENST00000565151 SLC24A1O60721 1099 aa20.63■□□□□ 0.89
USB1-210ENST00000565151 IP6K1Q92551 441 aa20.63■□□□□ 0.89
USB1-210ENST00000565151 BCL9O00512 1426 aa20.62■□□□□ 0.89
USB1-210ENST00000565151 TNS2Q63HR2 1409 aa20.62■□□□□ 0.89
USB1-210ENST00000565151 CDCA7Q9BWT1 371 aaPredicted RBP20.62■□□□□ 0.89
USB1-210ENST00000565151 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
USB1-210ENST00000565151 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
USB1-210ENST00000565151 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
USB1-210ENST00000565151 NLRP2Q9NX02 1062 aa20.61■□□□□ 0.89
USB1-210ENST00000565151 COG3Q96JB2 828 aa20.6■□□□□ 0.89
USB1-210ENST00000565151 BTAF1O14981 1849 aa20.59■□□□□ 0.89
USB1-210ENST00000565151 MAP2P11137 1827 aaKnown RBP20.59■□□□□ 0.89
USB1-210ENST00000565151 EXOC5O00471 708 aa20.58■□□□□ 0.89
USB1-210ENST00000565151 HOXC9P31274 260 aa20.58■□□□□ 0.89
USB1-210ENST00000565151 PROM2Q8N271 834 aa20.58■□□□□ 0.89
USB1-210ENST00000565151 LTV1Q96GA3 475 aaPredicted RBP20.58■□□□□ 0.89
USB1-210ENST00000565151 KCNQ2O43526 872 aa20.57■□□□□ 0.88
USB1-210ENST00000565151 RRS1Q15050 365 aaKnown RBP20.57■□□□□ 0.88
USB1-210ENST00000565151 BCL11BQ9C0K0 894 aaPredicted RBP20.57■□□□□ 0.88
USB1-210ENST00000565151 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
USB1-210ENST00000565151 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
USB1-210ENST00000565151 PLSCR1O15162 318 aa20.55■□□□□ 0.88
USB1-210ENST00000565151 IL2RBP14784 551 aa20.55■□□□□ 0.88
USB1-210ENST00000565151 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
USB1-210ENST00000565151 C11orf95C9JLR9 678 aaPredicted RBP20.54■□□□□ 0.88
USB1-210ENST00000565151 ANO8Q9HCE9 1232 aaPredicted RBP20.53■□□□□ 0.88
USB1-210ENST00000565151 CASZ1Q86V15 1759 aa20.53■□□□□ 0.88
USB1-210ENST00000565151 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
USB1-210ENST00000565151 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
USB1-210ENST00000565151 MEGF6O75095 1541 aa20.52■□□□□ 0.87
USB1-210ENST00000565151 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
USB1-210ENST00000565151 AMPHP49418 695 aa20.51■□□□□ 0.87
USB1-210ENST00000565151 ACSBG1Q96GR2 724 aa20.51■□□□□ 0.87
USB1-210ENST00000565151 RTL1A6NKG5 1358 aa20.5■□□□□ 0.87
USB1-210ENST00000565151 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
USB1-210ENST00000565151 NBPF6Q5VWK0 638 aa20.49■□□□□ 0.87
USB1-210ENST00000565151 NBPF4Q96M43 638 aa20.49■□□□□ 0.87
USB1-210ENST00000565151 PDGFDQ9GZP0 370 aaPredicted RBP20.48■□□□□ 0.87
USB1-210ENST00000565151 PAPPAQ13219 1627 aa20.48■□□□□ 0.87
USB1-210ENST00000565151 USHBP1Q8N6Y0 703 aa20.47■□□□□ 0.87
USB1-210ENST00000565151 EMILIN1Q9Y6C2 1016 aa20.46■□□□□ 0.87
USB1-210ENST00000565151 INSRP06213 1382 aa20.46■□□□□ 0.87
USB1-210ENST00000565151 EIF4G2P78344 907 aaKnown RBP eCLIP20.45■□□□□ 0.86
USB1-210ENST00000565151 TXNRD1Q16881 649 aa20.45■□□□□ 0.86
USB1-210ENST00000565151 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms