RNA–Protein interactions for RNA: ENST00000565142.1

ITGAM-204, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-204ENST00000565142 TIMELESSQ9UNS1 1208 aa22.74■■□□□ 1.23
ITGAM-204ENST00000565142 EVA1CP58658 441 aa22.73■■□□□ 1.23
ITGAM-204ENST00000565142 HDGFL2Q7Z4V5 671 aaPredicted RBP22.72■■□□□ 1.23
ITGAM-204ENST00000565142 NME9Q86XW9 330 aa22.72■■□□□ 1.23
ITGAM-204ENST00000565142 TCP11L2Q8N4U5 519 aa22.72■■□□□ 1.23
ITGAM-204ENST00000565142 USP35Q9P2H5 1018 aa22.72■■□□□ 1.23
ITGAM-204ENST00000565142 ZRANB1Q9UGI0 708 aa22.72■■□□□ 1.23
ITGAM-204ENST00000565142 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
ITGAM-204ENST00000565142 ZBTB7CA1YPR0 619 aa22.71■■□□□ 1.23
ITGAM-204ENST00000565142 FAM182BQ5T319 152 aa22.71■■□□□ 1.23
ITGAM-204ENST00000565142 DEFB132Q7Z7B7 95 aa22.71■■□□□ 1.23
ITGAM-204ENST00000565142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
ITGAM-204ENST00000565142 AXIN2Q9Y2T1 843 aa22.71■■□□□ 1.23
ITGAM-204ENST00000565142 THRAP3Q9Y2W1 955 aaKnown RBP22.71■■□□□ 1.23
ITGAM-204ENST00000565142 TERF2IPQ9NYB0 399 aa22.7■■□□□ 1.22
ITGAM-204ENST00000565142 WDR17Q8IZU2 1322 aa22.7■■□□□ 1.22
ITGAM-204ENST00000565142 ANKRD36BQ8N2N9 1353 aa22.7■■□□□ 1.22
ITGAM-204ENST00000565142 RREB1Q92766 1687 aa22.7■■□□□ 1.22
ITGAM-204ENST00000565142 FAM208AQ9UK61 1670 aaKnown RBP22.69■■□□□ 1.22
ITGAM-204ENST00000565142 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
ITGAM-204ENST00000565142 SOX12O15370 315 aa22.68■■□□□ 1.22
ITGAM-204ENST00000565142 SLC24A1O60721 1099 aa22.68■■□□□ 1.22
ITGAM-204ENST00000565142 SF3B2Q13435 895 aaKnown RBP22.66■■□□□ 1.22
ITGAM-204ENST00000565142 RGPD3A6NKT7 1758 aaPredicted RBP22.66■■□□□ 1.22
ITGAM-204ENST00000565142 RGPD4Q7Z3J3 1758 aa22.66■■□□□ 1.22
ITGAM-204ENST00000565142 TMF1P82094 1093 aa22.64■■□□□ 1.21
ITGAM-204ENST00000565142 NUP188Q5SRE5 1749 aa22.64■■□□□ 1.21
ITGAM-204ENST00000565142 OVOS2A0A0G2JMS6 1433 aa22.63■■□□□ 1.21
ITGAM-204ENST00000565142 ERBB3P21860 1342 aa22.62■■□□□ 1.21
ITGAM-204ENST00000565142 BAG6P46379 1132 aa22.62■■□□□ 1.21
ITGAM-204ENST00000565142 FAM196AQ6ZSG2 479 aa22.62■■□□□ 1.21
ITGAM-204ENST00000565142 TOM1L2Q6ZVM7 507 aa22.62■■□□□ 1.21
ITGAM-204ENST00000565142 TNS2Q63HR2 1409 aa22.61■■□□□ 1.21
ITGAM-204ENST00000565142 CCDC7Q96M83 1385 aa22.61■■□□□ 1.21
ITGAM-204ENST00000565142 PDE3BQ13370 1112 aa22.59■■□□□ 1.21
ITGAM-204ENST00000565142 CARD10Q9BWT7 1032 aa22.59■■□□□ 1.21
ITGAM-204ENST00000565142 LRP5O75197 1615 aa22.59■■□□□ 1.21
ITGAM-204ENST00000565142 ANKRD26Q9UPS8 1709 aa22.57■■□□□ 1.2
ITGAM-204ENST00000565142 BCL9O00512 1426 aa22.57■■□□□ 1.2
ITGAM-204ENST00000565142 SRCAPQ6ZRS2 3230 aa22.56■■□□□ 1.2
ITGAM-204ENST00000565142 RGPD2P0DJD1 1756 aa22.56■■□□□ 1.2
ITGAM-204ENST00000565142 TRIM37O94972 964 aa22.56■■□□□ 1.2
ITGAM-204ENST00000565142 EN1Q05925 392 aaPredicted RBP22.56■■□□□ 1.2
ITGAM-204ENST00000565142 PARD3Q8TEW0 1356 aa22.55■■□□□ 1.2
ITGAM-204ENST00000565142 CSB-PGBD3P0DP91 1061 aa22.55■■□□□ 1.2
ITGAM-204ENST00000565142 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
ITGAM-204ENST00000565142 CCER1Q8TC90 406 aaPredicted RBP22.55■■□□□ 1.2
ITGAM-204ENST00000565142 NHSQ6T4R5 1651 aa22.55■■□□□ 1.2
ITGAM-204ENST00000565142 CDCA7Q9BWT1 371 aaPredicted RBP22.54■■□□□ 1.2
ITGAM-204ENST00000565142 RTL1A6NKG5 1358 aa22.53■■□□□ 1.2
ITGAM-204ENST00000565142 DDB1Q16531 1140 aa22.53■■□□□ 1.2
ITGAM-204ENST00000565142 SHANK3Q9BYB0 1731 aa22.53■■□□□ 1.2
ITGAM-204ENST00000565142 NSD3Q9BZ95 1437 aa22.52■■□□□ 1.2
ITGAM-204ENST00000565142 COG3Q96JB2 828 aa22.52■■□□□ 1.2
ITGAM-204ENST00000565142 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
ITGAM-204ENST00000565142 ANKRD24Q8TF21 1146 aa22.51■■□□□ 1.19
ITGAM-204ENST00000565142 CAMKK2Q96RR4 588 aa22.51■■□□□ 1.19
ITGAM-204ENST00000565142 C11orf95C9JLR9 678 aaPredicted RBP22.5■■□□□ 1.19
ITGAM-204ENST00000565142 EZH2Q15910 746 aaKnown RBP22.5■■□□□ 1.19
ITGAM-204ENST00000565142 FYB1O15117 783 aa22.49■■□□□ 1.19
ITGAM-204ENST00000565142 MARCH10Q8NA82 808 aaPredicted RBP22.49■■□□□ 1.19
ITGAM-204ENST00000565142 IP6K1Q92551 441 aa22.49■■□□□ 1.19
ITGAM-204ENST00000565142 APBA3O96018 575 aa22.47■■□□□ 1.19
ITGAM-204ENST00000565142 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
ITGAM-204ENST00000565142 CARD14Q9BXL6 1004 aa22.46■■□□□ 1.19
ITGAM-204ENST00000565142 NLRP2Q9NX02 1062 aa22.46■■□□□ 1.19
ITGAM-204ENST00000565142 FBLN1P23142 703 aa22.45■■□□□ 1.18
ITGAM-204ENST00000565142 HOXC9P31274 260 aa22.45■■□□□ 1.18
ITGAM-204ENST00000565142 BTAF1O14981 1849 aa22.43■■□□□ 1.18
ITGAM-204ENST00000565142 HSPA5P11021 654 aaKnown RBP22.43■■□□□ 1.18
ITGAM-204ENST00000565142 DOT1LQ8TEK3 1739 aa22.43■■□□□ 1.18
ITGAM-204ENST00000565142 MEGF6O75095 1541 aa22.42■■□□□ 1.18
ITGAM-204ENST00000565142 PSDA5PKW4 1024 aaPredicted RBP22.42■■□□□ 1.18
ITGAM-204ENST00000565142 IL2RBP14784 551 aa22.42■■□□□ 1.18
ITGAM-204ENST00000565142 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
ITGAM-204ENST00000565142 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
ITGAM-204ENST00000565142 RRS1Q15050 365 aaKnown RBP22.41■■□□□ 1.18
ITGAM-204ENST00000565142 PTF1AQ7RTS3 328 aa22.41■■□□□ 1.18
ITGAM-204ENST00000565142 FLT4P35916 1363 aa22.4■■□□□ 1.18
ITGAM-204ENST00000565142 EXOC5O00471 708 aa22.4■■□□□ 1.18
ITGAM-204ENST00000565142 AMPHP49418 695 aa22.39■■□□□ 1.17
ITGAM-204ENST00000565142 BCL11BQ9C0K0 894 aaPredicted RBP22.39■■□□□ 1.17
ITGAM-204ENST00000565142 PAPPAQ13219 1627 aa22.39■■□□□ 1.17
ITGAM-204ENST00000565142 INSRP06213 1382 aa22.38■■□□□ 1.17
ITGAM-204ENST00000565142 MAP2P11137 1827 aaKnown RBP22.38■■□□□ 1.17
ITGAM-204ENST00000565142 CASZ1Q86V15 1759 aa22.38■■□□□ 1.17
ITGAM-204ENST00000565142 LTV1Q96GA3 475 aaPredicted RBP22.38■■□□□ 1.17
ITGAM-204ENST00000565142 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
ITGAM-204ENST00000565142 PKD1L3Q7Z443 1732 aa22.37■■□□□ 1.17
ITGAM-204ENST00000565142 R3HDM1Q15032 1099 aaKnown RBP22.37■■□□□ 1.17
ITGAM-204ENST00000565142 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
ITGAM-204ENST00000565142 PLSCR1O15162 318 aa22.36■■□□□ 1.17
ITGAM-204ENST00000565142 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
ITGAM-204ENST00000565142 EMILIN1Q9Y6C2 1016 aa22.31■■□□□ 1.16
ITGAM-204ENST00000565142 KCNQ2O43526 872 aa22.3■■□□□ 1.16
ITGAM-204ENST00000565142 HSP90AB2PQ58FF8 381 aa22.3■■□□□ 1.16
ITGAM-204ENST00000565142 NBPF6Q5VWK0 638 aa22.3■■□□□ 1.16
ITGAM-204ENST00000565142 NBPF4Q96M43 638 aa22.3■■□□□ 1.16
ITGAM-204ENST00000565142 POLR3GLQ9BT43 218 aa22.3■■□□□ 1.16
ITGAM-204ENST00000565142 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms