RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 DDB1Q16531 1140 aa26.2■■□□□ 1.78
CLN6-204ENST00000564752 AKAP12Q02952 1782 aa26.2■■□□□ 1.78
CLN6-204ENST00000564752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
CLN6-204ENST00000564752 PARP4Q9UKK3 1724 aaKnown RBP26.19■■□□□ 1.78
CLN6-204ENST00000564752 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
CLN6-204ENST00000564752 CDCA7Q9BWT1 371 aaPredicted RBP26.18■■□□□ 1.78
CLN6-204ENST00000564752 CARD10Q9BWT7 1032 aa26.18■■□□□ 1.78
CLN6-204ENST00000564752 SLC12A5Q9H2X9 1139 aa26.18■■□□□ 1.78
CLN6-204ENST00000564752 USP31Q70CQ4 1352 aa26.18■■□□□ 1.78
CLN6-204ENST00000564752 PUS7Q96PZ0 661 aaKnown RBP26.17■■□□□ 1.78
CLN6-204ENST00000564752 CD163L1Q9NR16 1453 aa26.17■■□□□ 1.78
CLN6-204ENST00000564752 OVOS2A0A0G2JMS6 1433 aa26.16■■□□□ 1.78
CLN6-204ENST00000564752 OVOS2A0A0J9YW53 1432 aa26.16■■□□□ 1.78
CLN6-204ENST00000564752 OVOS2Q6IE36 1432 aa26.16■■□□□ 1.78
CLN6-204ENST00000564752 CSB-PGBD3P0DP91 1061 aa26.16■■□□□ 1.78
CLN6-204ENST00000564752 HDGFL2Q7Z4V5 671 aaPredicted RBP26.16■■□□□ 1.78
CLN6-204ENST00000564752 NFAT5O94916 1531 aa26.15■■□□□ 1.78
CLN6-204ENST00000564752 NME9Q86XW9 330 aa26.15■■□□□ 1.78
CLN6-204ENST00000564752 NBPF14Q5TI25 921 aa26.13■■□□□ 1.77
CLN6-204ENST00000564752 MARCH10Q8NA82 808 aaPredicted RBP26.13■■□□□ 1.77
CLN6-204ENST00000564752 RREB1Q92766 1687 aa26.12■■□□□ 1.77
CLN6-204ENST00000564752 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
CLN6-204ENST00000564752 PLSCR1O15162 318 aa26.1■■□□□ 1.77
CLN6-204ENST00000564752 TESK2Q96S53 571 aa26.1■■□□□ 1.77
CLN6-204ENST00000564752 BCL11BQ9C0K0 894 aaPredicted RBP26.1■■□□□ 1.77
CLN6-204ENST00000564752 MON2Q7Z3U7 1717 aa26.1■■□□□ 1.77
CLN6-204ENST00000564752 PEAK1Q9H792 1746 aa26.1■■□□□ 1.77
CLN6-204ENST00000564752 NUP188Q5SRE5 1749 aa26.09■■□□□ 1.77
CLN6-204ENST00000564752 EXOC5O00471 708 aa26.09■■□□□ 1.77
CLN6-204ENST00000564752 LRRC37A3O60309 1634 aa26.09■■□□□ 1.77
CLN6-204ENST00000564752 CCDC7Q96M83 1385 aa26.08■■□□□ 1.77
CLN6-204ENST00000564752 BCL9O00512 1426 aa26.08■■□□□ 1.77
CLN6-204ENST00000564752 EDC4Q6P2E9 1401 aaKnown RBP26.08■■□□□ 1.77
CLN6-204ENST00000564752 ST20-MTHFSA0A0A6YYL1 179 aa26.08■■□□□ 1.77
CLN6-204ENST00000564752 ABCC6O95255 1503 aa26.08■■□□□ 1.77
CLN6-204ENST00000564752 PTF1AQ7RTS3 328 aa26.07■■□□□ 1.76
CLN6-204ENST00000564752 A0A1W2PP64 1363 aa26.07■■□□□ 1.76
CLN6-204ENST00000564752 SLC24A1O60721 1099 aa26.06■■□□□ 1.76
CLN6-204ENST00000564752 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
CLN6-204ENST00000564752 ERBB3P21860 1342 aa26.05■■□□□ 1.76
CLN6-204ENST00000564752 RGPD5Q99666 1765 aa26.05■■□□□ 1.76
CLN6-204ENST00000564752 NLRP2Q9NX02 1062 aa26.03■■□□□ 1.76
CLN6-204ENST00000564752 USP54Q70EL1 1684 aa26.03■■□□□ 1.76
CLN6-204ENST00000564752 ANKRD24Q8TF21 1146 aa26.01■■□□□ 1.75
CLN6-204ENST00000564752 NINLQ9Y2I6 1382 aa26.01■■□□□ 1.75
CLN6-204ENST00000564752 PROM2Q8N271 834 aa26■■□□□ 1.75
CLN6-204ENST00000564752 CLSPNQ9HAW4 1339 aa25.99■■□□□ 1.75
CLN6-204ENST00000564752 WNK3Q9BYP7 1800 aa25.99■■□□□ 1.75
CLN6-204ENST00000564752 SBF2Q86WG5 1849 aa25.98■■□□□ 1.75
CLN6-204ENST00000564752 IL2RBP14784 551 aa25.97■■□□□ 1.75
CLN6-204ENST00000564752 IP6K1Q92551 441 aa25.97■■□□□ 1.75
CLN6-204ENST00000564752 TNS2Q63HR2 1409 aa25.97■■□□□ 1.75
CLN6-204ENST00000564752 ANO8Q9HCE9 1232 aaPredicted RBP25.95■■□□□ 1.74
CLN6-204ENST00000564752 KCNQ2O43526 872 aa25.94■■□□□ 1.74
CLN6-204ENST00000564752 COG3Q96JB2 828 aa25.94■■□□□ 1.74
CLN6-204ENST00000564752 SPON1Q9HCB6 807 aa25.94■■□□□ 1.74
CLN6-204ENST00000564752 RGPD3A6NKT7 1758 aaPredicted RBP25.94■■□□□ 1.74
CLN6-204ENST00000564752 RGPD4Q7Z3J3 1758 aa25.94■■□□□ 1.74
CLN6-204ENST00000564752 TXNRD1Q16881 649 aa25.92■■□□□ 1.74
CLN6-204ENST00000564752 TMF1P82094 1093 aa25.91■■□□□ 1.74
CLN6-204ENST00000564752 LTN1O94822 1766 aa25.9■■□□□ 1.74
CLN6-204ENST00000564752 ACSBG1Q96GR2 724 aa25.9■■□□□ 1.74
CLN6-204ENST00000564752 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
CLN6-204ENST00000564752 ANKRD36BQ8N2N9 1353 aa25.9■■□□□ 1.74
CLN6-204ENST00000564752 FBLN1P23142 703 aa25.89■■□□□ 1.74
CLN6-204ENST00000564752 USP47Q96K76 1375 aa25.89■■□□□ 1.74
CLN6-204ENST00000564752 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
CLN6-204ENST00000564752 LTV1Q96GA3 475 aaPredicted RBP25.88■■□□□ 1.73
CLN6-204ENST00000564752 PPP1R1BQ9UD71 204 aaPredicted RBP25.88■■□□□ 1.73
CLN6-204ENST00000564752 HOXC9P31274 260 aa25.87■■□□□ 1.73
CLN6-204ENST00000564752 FYB1O15117 783 aa25.86■■□□□ 1.73
CLN6-204ENST00000564752 AMPHP49418 695 aa25.85■■□□□ 1.73
CLN6-204ENST00000564752 PDGFDQ9GZP0 370 aaPredicted RBP25.85■■□□□ 1.73
CLN6-204ENST00000564752 STK32BQ9NY57 414 aa25.85■■□□□ 1.73
CLN6-204ENST00000564752 SLC15A2Q16348 729 aa25.84■■□□□ 1.73
CLN6-204ENST00000564752 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
CLN6-204ENST00000564752 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
CLN6-204ENST00000564752 GGNBP2Q9H3C7 697 aa25.82■■□□□ 1.72
CLN6-204ENST00000564752 YY1P25490 414 aa25.81■■□□□ 1.72
CLN6-204ENST00000564752 DDX54Q8TDD1 881 aaKnown RBP25.81■■□□□ 1.72
CLN6-204ENST00000564752 RRS1Q15050 365 aaKnown RBP25.8■■□□□ 1.72
CLN6-204ENST00000564752 ZBTB7AO95365 584 aa25.79■■□□□ 1.72
CLN6-204ENST00000564752 NHSQ6T4R5 1651 aa25.79■■□□□ 1.72
CLN6-204ENST00000564752 CASZ1Q86V15 1759 aa25.79■■□□□ 1.72
CLN6-204ENST00000564752 DCAF8L1A6NGE4 600 aa25.77■■□□□ 1.72
CLN6-204ENST00000564752 RTL1A6NKG5 1358 aa25.77■■□□□ 1.72
CLN6-204ENST00000564752 PTGER2P43116 358 aa25.75■■□□□ 1.71
CLN6-204ENST00000564752 NBPF6Q5VWK0 638 aa25.75■■□□□ 1.71
CLN6-204ENST00000564752 ZCRB1Q8TBF4 217 aaKnown RBP25.75■■□□□ 1.71
CLN6-204ENST00000564752 NBPF4Q96M43 638 aa25.75■■□□□ 1.71
CLN6-204ENST00000564752 ATF5Q9Y2D1 282 aaPredicted RBP25.75■■□□□ 1.71
CLN6-204ENST00000564752 LRRC4BQ9NT99 713 aa25.74■■□□□ 1.71
CLN6-204ENST00000564752 CARD14Q9BXL6 1004 aa25.73■■□□□ 1.71
CLN6-204ENST00000564752 FAM208AQ9UK61 1670 aaKnown RBP25.73■■□□□ 1.71
CLN6-204ENST00000564752 PRIM1P49642 420 aaKnown RBP25.71■■□□□ 1.71
CLN6-204ENST00000564752 MTFR1LQ9H019 292 aa25.71■■□□□ 1.71
CLN6-204ENST00000564752 HSP90AB2PQ58FF8 381 aa25.7■■□□□ 1.7
CLN6-204ENST00000564752 MYOM1P52179 1685 aa25.69■■□□□ 1.7
CLN6-204ENST00000564752 ZNF827Q17R98 1081 aa25.69■■□□□ 1.7
CLN6-204ENST00000564752 SLC27A3Q5K4L6 730 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms