RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CHMP5Q9NZZ3 219 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 ANKRD26Q9UPS8 1709 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 A0A1W2PP64 1363 aa9.58□□□□□ -0.88
ATXN3-249ENST00000564606 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
ATXN3-249ENST00000564606 SKOR2Q2VWA4 1001 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-249ENST00000564606 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
ATXN3-249ENST00000564606 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
ATXN3-249ENST00000564606 DNAJC5Q9H3Z4 198 aa9.57□□□□□ -0.88
ATXN3-249ENST00000564606 CABP2Q9NPB3 220 aa9.57□□□□□ -0.88
ATXN3-249ENST00000564606 IFT57Q9NWB7 429 aa9.57□□□□□ -0.88
ATXN3-249ENST00000564606 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 AATKQ6ZMQ8 1374 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 FYB1O15117 783 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 SMC5Q8IY18 1101 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 PRAM1Q96QH2 718 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
ATXN3-249ENST00000564606 RRP7AQ9Y3A4 280 aaKnown RBP9.56□□□□□ -0.88
ATXN3-249ENST00000564606 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
ATXN3-249ENST00000564606 GOLGA6L22H0YM25 854 aa9.55□□□□□ -0.88
ATXN3-249ENST00000564606 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
ATXN3-249ENST00000564606 NFE2L2Q16236 605 aa9.55□□□□□ -0.88
ATXN3-249ENST00000564606 CDK19Q9BWU1 502 aa9.55□□□□□ -0.88
ATXN3-249ENST00000564606 C22orf23Q9BZE7 217 aa9.55□□□□□ -0.88
ATXN3-249ENST00000564606 PTPRMP28827 1452 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-249ENST00000564606 CHRDL2Q6WN34 429 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 COG3Q96JB2 828 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 ZFP91Q96JP5 570 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-249ENST00000564606 GBP4Q96PP9 640 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 STK26Q9P289 416 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 PREX1Q8TCU6 1659 aa9.54□□□□□ -0.88
ATXN3-249ENST00000564606 TRIM27P14373 513 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 BMP2KLQ5H9B9 411 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 SNX21Q969T3 373 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 GGNBP2Q9H3C7 697 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 FAM135BQ49AJ0 1406 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 RICTORQ6R327 1708 aa9.53□□□□□ -0.88
ATXN3-249ENST00000564606 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-249ENST00000564606 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-249ENST00000564606 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-249ENST00000564606 RAPGEF3O95398 923 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 NUCB1Q02818 461 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 ZBTB40Q9NUA8 1239 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 NOB1Q9ULX3 412 aaKnown RBP9.52□□□□□ -0.89
ATXN3-249ENST00000564606 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 CCDC61Q9Y6R9 512 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 ALKQ9UM73 1620 aa9.52□□□□□ -0.89
ATXN3-249ENST00000564606 CDK12Q9NYV4 1490 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-249ENST00000564606 ARHGEF40Q8TER5 1519 aa9.51□□□□□ -0.89
ATXN3-249ENST00000564606 HSP90AA1P07900 732 aaKnown RBP9.51□□□□□ -0.89
ATXN3-249ENST00000564606 RBM25P49756 843 aaKnown RBP9.51□□□□□ -0.89
ATXN3-249ENST00000564606 CHD1LQ86WJ1 897 aa9.51□□□□□ -0.89
ATXN3-249ENST00000564606 FAM43AQ8N2R8 423 aa9.51□□□□□ -0.89
ATXN3-249ENST00000564606 ANP32BQ92688 251 aaKnown RBP9.51□□□□□ -0.89
ATXN3-249ENST00000564606 SGIP1Q9BQI5 828 aa9.51□□□□□ -0.89
ATXN3-249ENST00000564606 CABP1Q9NZU7 370 aa9.51□□□□□ -0.89
ATXN3-249ENST00000564606 SOS1Q07889 1333 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-249ENST00000564606 PIK3R4Q99570 1358 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 RIMS2Q9UQ26 1411 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 KIF20BQ96Q89 1820 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 WASLO00401 505 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-249ENST00000564606 STK25O00506 426 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 HMMRO75330 724 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 PCDHB8Q9UN66 801 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
ATXN3-249ENST00000564606 PTCH1Q13635 1447 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 FRAT2O75474 233 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-249ENST00000564606 RLBP1P12271 317 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 PRKAR2BP31323 418 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 SAFB2Q14151 953 aaKnown RBP eCLIP9.49□□□□□ -0.89
ATXN3-249ENST00000564606 RPAP2Q8IXW5 612 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-249ENST00000564606 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-249ENST00000564606 RSPH6AQ9H0K4 717 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 USP19O94966 1318 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 PTPRCP08575 1304 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 SPATA31D1Q6ZQQ2 1576 aa9.49□□□□□ -0.89
ATXN3-249ENST00000564606 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
ATXN3-249ENST00000564606 HSP90AB1P08238 724 aaKnown RBP9.48□□□□□ -0.89
ATXN3-249ENST00000564606 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
ATXN3-249ENST00000564606 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
ATXN3-249ENST00000564606 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
ATXN3-249ENST00000564606 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
ATXN3-249ENST00000564606 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
ATXN3-249ENST00000564606 TTC21BQ7Z4L5 1316 aa9.48□□□□□ -0.89
ATXN3-249ENST00000564606 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
ATXN3-249ENST00000564606 NLRP1Q9C000 1473 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 CDC45O75419 566 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 MCM4P33991 863 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 MRE11P49959 708 aa9.47□□□□□ -0.89
ATXN3-249ENST00000564606 TWISTNBQ3B726 338 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-249ENST00000564606 SLKQ9H2G2 1235 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-249ENST00000564606 POLKQ9UBT6 870 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 218.8 ms