RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ADH1BP00325 375 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 FOXD4L5Q5VV16 416 aaPredicted RBP4.44□□□□□ -1.7
CHD9-209ENST00000564255 ANKRD13DQ6ZTN6 518 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 FOXD4L4Q8WXT5 416 aaPredicted RBP4.44□□□□□ -1.7
CHD9-209ENST00000564255 CLP1Q92989 425 aaKnown RBP4.44□□□□□ -1.7
CHD9-209ENST00000564255 PCDHB9Q9Y5E1 797 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 SSFA2P28290 1259 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 NCOA4Q13772 614 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 LARP1Q6PKG0 1096 aaKnown RBP4.44□□□□□ -1.7
CHD9-209ENST00000564255 RNF135Q8IUD6 432 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 ARHGAP9Q9BRR9 750 aa4.44□□□□□ -1.7
CHD9-209ENST00000564255 PTCRAQ6ISU1 281 aaPredicted RBP4.43□□□□□ -1.7
CHD9-209ENST00000564255 THSD4Q6ZMP0 1018 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 SH3RF1Q7Z6J0 888 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 DEPDC4Q8N2C3 294 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 ADAM32Q8TC27 787 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 UNC93B1Q9H1C4 597 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 EML3Q32P44 896 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 ANKMY2Q8IV38 441 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 FAM200AQ8TCP9 573 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 AMOTL2Q9Y2J4 779 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 ZPR1O75312 459 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 COPS2P61201 443 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 CCDC27Q2M243 656 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 NYAP1Q6ZVC0 841 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 MYT1LQ9UL68 1186 aa4.43□□□□□ -1.7
CHD9-209ENST00000564255 RASA1P20936 1047 aa4.42□□□□□ -1.7
CHD9-209ENST00000564255 MMRN1Q13201 1228 aa4.42□□□□□ -1.7
CHD9-209ENST00000564255 CCER1Q8TC90 406 aaPredicted RBP4.42□□□□□ -1.7
CHD9-209ENST00000564255 CCDC85AQ96PX6 553 aaPredicted RBP4.42□□□□□ -1.7
CHD9-209ENST00000564255 ZBTB7BO15156 539 aaPredicted RBP4.42□□□□□ -1.7
CHD9-209ENST00000564255 TLL1O43897 1013 aa4.42□□□□□ -1.7
CHD9-209ENST00000564255 TSGA10IPQ3SY00 556 aa4.42□□□□□ -1.7
CHD9-209ENST00000564255 TRIM50Q86XT4 487 aa4.42□□□□□ -1.7
CHD9-209ENST00000564255 C1orf216Q8TAB5 229 aa4.42□□□□□ -1.7
CHD9-209ENST00000564255 ARID4AP29374 1257 aaPredicted RBP4.41□□□□□ -1.7
CHD9-209ENST00000564255 CLDN10P78369 228 aa4.41□□□□□ -1.7
CHD9-209ENST00000564255 SIX5Q8N196 739 aa4.41□□□□□ -1.7
CHD9-209ENST00000564255 LARGE2Q8N3Y3 721 aa4.41□□□□□ -1.7
CHD9-209ENST00000564255 SWI5Q1ZZU3 235 aa4.41□□□□□ -1.7
CHD9-209ENST00000564255 ZBTB33Q86T24 672 aa4.41□□□□□ -1.7
CHD9-209ENST00000564255 DNAAF2Q9NVR5 837 aaKnown RBP4.41□□□□□ -1.7
CHD9-209ENST00000564255 ESPNB1AK53 854 aa4.4□□□□□ -1.7
CHD9-209ENST00000564255 DZIP3Q86Y13 1208 aaKnown RBP4.4□□□□□ -1.7
CHD9-209ENST00000564255 OGFOD1Q8N543 542 aa4.4□□□□□ -1.7
CHD9-209ENST00000564255 MTRQ99707 1265 aa4.4□□□□□ -1.7
CHD9-209ENST00000564255 C1QTNF2Q9BXJ5 285 aa4.4□□□□□ -1.7
CHD9-209ENST00000564255 NOD1Q9Y239 953 aa4.4□□□□□ -1.7
CHD9-209ENST00000564255 ATP1A2P50993 1020 aa4.4□□□□□ -1.71
CHD9-209ENST00000564255 DPYDQ12882 1025 aa4.4□□□□□ -1.71
CHD9-209ENST00000564255 TJAP1Q5JTD0 557 aa4.4□□□□□ -1.71
CHD9-209ENST00000564255 SLC6A16Q9GZN6 736 aa4.4□□□□□ -1.71
CHD9-209ENST00000564255 IL21Q9HBE4 155 aa4.4□□□□□ -1.71
CHD9-209ENST00000564255 DOLKQ9UPQ8 538 aa4.4□□□□□ -1.71
CHD9-209ENST00000564255 GIGYF1O75420 1035 aaPredicted RBP4.39□□□□□ -1.71
CHD9-209ENST00000564255 CCDC125Q86Z20 511 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 BAP1Q92560 729 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 ZNF428Q96B54 188 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 SOWAHDA6NJG2 315 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 ATP2B4P23634 1241 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 RBM25P49756 843 aaKnown RBP4.39□□□□□ -1.71
CHD9-209ENST00000564255 C4orf48Q5BLP8 95 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 TRMT44Q8IYL2 757 aaKnown RBP4.39□□□□□ -1.71
CHD9-209ENST00000564255 ERFEQ4G0M1 354 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 RNF20Q5VTR2 975 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 SPNS2Q8IVW8 549 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 CCDC24Q8N4L8 307 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 FOXJ1Q92949 421 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 KIAA1024Q9UPX6 916 aa4.39□□□□□ -1.71
CHD9-209ENST00000564255 DNAJC14Q6Y2X3 702 aaPredicted RBP4.38□□□□□ -1.71
CHD9-209ENST00000564255 BPHLQ86WA6 291 aaPredicted RBP4.38□□□□□ -1.71
CHD9-209ENST00000564255 ZNF511Q8NB15 262 aa4.38□□□□□ -1.71
CHD9-209ENST00000564255 PCDHGA11Q9Y5H2 935 aa4.38□□□□□ -1.71
CHD9-209ENST00000564255 TAS1R3Q7RTX0 852 aa4.38□□□□□ -1.71
CHD9-209ENST00000564255 ERCC3P19447 782 aa4.37□□□□□ -1.71
CHD9-209ENST00000564255 GTF2IP78347 998 aa4.37□□□□□ -1.71
CHD9-209ENST00000564255 KCTD12Q96CX2 325 aaKnown RBP4.37□□□□□ -1.71
CHD9-209ENST00000564255 CXXC1Q9P0U4 656 aaPredicted RBP4.37□□□□□ -1.71
CHD9-209ENST00000564255 OCLNQ16625 522 aa4.37□□□□□ -1.71
CHD9-209ENST00000564255 ZNF516Q92618 1163 aa4.37□□□□□ -1.71
CHD9-209ENST00000564255 EGFL7Q9UHF1 273 aa4.37□□□□□ -1.71
CHD9-209ENST00000564255 CDV3Q9UKY7 258 aaKnown RBP4.37□□□□□ -1.71
CHD9-209ENST00000564255 RBM47A0AV96 593 aaKnown RBP4.36□□□□□ -1.71
CHD9-209ENST00000564255 M0R2N6 131 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 SEC13P55735 322 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 NOM1Q5C9Z4 860 aaKnown RBP4.36□□□□□ -1.71
CHD9-209ENST00000564255 SEPT12Q8IYM1 358 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 SIRT1Q96EB6 747 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 CARD14Q9BXL6 1004 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 E9PSI1 815 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 LINC01559Q495D7 138 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 OXLD1Q5BKU9 147 aa4.36□□□□□ -1.71
CHD9-209ENST00000564255 ZNF594Q96JF6 807 aaPredicted RBP4.36□□□□□ -1.71
CHD9-209ENST00000564255 S1PR4O95977 384 aa4.35□□□□□ -1.71
CHD9-209ENST00000564255 SH3BP2P78314 561 aa4.35□□□□□ -1.71
CHD9-209ENST00000564255 CCDC102BQ68D86 513 aa4.35□□□□□ -1.71
CHD9-209ENST00000564255 MAGEB6P1A0A0J9YX57 407 aa4.35□□□□□ -1.71
CHD9-209ENST00000564255 SFI1A8K8P3 1242 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms