RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 SOX12O15370 315 aa27.64■■■□□ 2.02
CMTM3-207ENST00000564060 KRT27Q7Z3Y8 459 aa27.63■■■□□ 2.01
CMTM3-207ENST00000564060 CRB1P82279 1406 aa27.62■■■□□ 2.01
CMTM3-207ENST00000564060 LARP1Q6PKG0 1096 aaKnown RBP27.61■■■□□ 2.01
CMTM3-207ENST00000564060 CCDC125Q86Z20 511 aa27.61■■■□□ 2.01
CMTM3-207ENST00000564060 ZRANB1Q9UGI0 708 aa27.61■■■□□ 2.01
CMTM3-207ENST00000564060 THRAP3Q9Y2W1 955 aaKnown RBP27.61■■■□□ 2.01
CMTM3-207ENST00000564060 BARGINQ6ZT62 677 aa27.6■■■□□ 2.01
CMTM3-207ENST00000564060 USP35Q9P2H5 1018 aa27.6■■■□□ 2.01
CMTM3-207ENST00000564060 HSPA5P11021 654 aaKnown RBP27.59■■■□□ 2.01
CMTM3-207ENST00000564060 TCP11L2Q8N4U5 519 aa27.59■■■□□ 2.01
CMTM3-207ENST00000564060 COG3Q96JB2 828 aa27.59■■■□□ 2.01
CMTM3-207ENST00000564060 WNK3Q9BYP7 1800 aa27.59■■■□□ 2.01
CMTM3-207ENST00000564060 PARP4Q9UKK3 1724 aaKnown RBP27.58■■■□□ 2.01
CMTM3-207ENST00000564060 EP400Q96L91 3159 aa27.58■■■□□ 2.01
CMTM3-207ENST00000564060 WDR17Q8IZU2 1322 aa27.56■■■□□ 2
CMTM3-207ENST00000564060 TOM1L2Q6ZVM7 507 aa27.55■■■□□ 2
CMTM3-207ENST00000564060 BLMP54132 1417 aaPredicted RBP27.54■■■□□ 2
CMTM3-207ENST00000564060 AXIN2Q9Y2T1 843 aa27.54■■■□□ 2
CMTM3-207ENST00000564060 CSB-PGBD3P0DP91 1061 aa27.52■■■□□ 2
CMTM3-207ENST00000564060 RGPD1P0DJD0 1748 aa27.52■■■□□ 2
CMTM3-207ENST00000564060 FAM208AQ9UK61 1670 aaKnown RBP27.52■■■□□ 2
CMTM3-207ENST00000564060 POLR3GLQ9BT43 218 aa27.51■■□□□ 1.99
CMTM3-207ENST00000564060 NSD3Q9BZ95 1437 aa27.5■■□□□ 1.99
CMTM3-207ENST00000564060 SF3B2Q13435 895 aaKnown RBP27.49■■□□□ 1.99
CMTM3-207ENST00000564060 FYB1O15117 783 aa27.48■■□□□ 1.99
CMTM3-207ENST00000564060 LRRC37A3O60309 1634 aa27.48■■□□□ 1.99
CMTM3-207ENST00000564060 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
CMTM3-207ENST00000564060 PDE3BQ13370 1112 aa27.47■■□□□ 1.99
CMTM3-207ENST00000564060 CDCA7Q9BWT1 371 aaPredicted RBP27.47■■□□□ 1.99
CMTM3-207ENST00000564060 CARD10Q9BWT7 1032 aa27.47■■□□□ 1.99
CMTM3-207ENST00000564060 ERBB3P21860 1342 aa27.46■■□□□ 1.99
CMTM3-207ENST00000564060 GGNBP2Q9H3C7 697 aa27.46■■□□□ 1.99
CMTM3-207ENST00000564060 ANKRD26Q9UPS8 1709 aa27.45■■□□□ 1.99
CMTM3-207ENST00000564060 FAM196AQ6ZSG2 479 aa27.43■■□□□ 1.98
CMTM3-207ENST00000564060 IP6K1Q92551 441 aa27.43■■□□□ 1.98
CMTM3-207ENST00000564060 CARD14Q9BXL6 1004 aa27.43■■□□□ 1.98
CMTM3-207ENST00000564060 RTL1A6NKG5 1358 aa27.43■■□□□ 1.98
CMTM3-207ENST00000564060 CGNL1Q0VF96 1302 aa27.42■■□□□ 1.98
CMTM3-207ENST00000564060 C11orf95C9JLR9 678 aaPredicted RBP27.42■■□□□ 1.98
CMTM3-207ENST00000564060 TNS1Q9HBL0 1735 aaKnown RBP27.41■■□□□ 1.98
CMTM3-207ENST00000564060 MAP3K19Q56UN5 1328 aa27.41■■□□□ 1.98
CMTM3-207ENST00000564060 AMPHP49418 695 aa27.4■■□□□ 1.98
CMTM3-207ENST00000564060 ANKRD24Q8TF21 1146 aa27.4■■□□□ 1.98
CMTM3-207ENST00000564060 DDB1Q16531 1140 aa27.39■■□□□ 1.98
CMTM3-207ENST00000564060 FAM182BQ5T319 152 aa27.38■■□□□ 1.97
CMTM3-207ENST00000564060 NLRP2Q9NX02 1062 aa27.38■■□□□ 1.97
CMTM3-207ENST00000564060 KIF24Q5T7B8 1368 aa27.37■■□□□ 1.97
CMTM3-207ENST00000564060 DISP2A7MBM2 1401 aa27.37■■□□□ 1.97
CMTM3-207ENST00000564060 OVOS2A0A0G2JMS6 1433 aa27.36■■□□□ 1.97
CMTM3-207ENST00000564060 HOXC9P31274 260 aa27.36■■□□□ 1.97
CMTM3-207ENST00000564060 BAG6P46379 1132 aa27.36■■□□□ 1.97
CMTM3-207ENST00000564060 MAP2P11137 1827 aaKnown RBP27.36■■□□□ 1.97
CMTM3-207ENST00000564060 PEAK1Q9H792 1746 aa27.36■■□□□ 1.97
CMTM3-207ENST00000564060 SBF2Q86WG5 1849 aa27.34■■□□□ 1.97
CMTM3-207ENST00000564060 SMG6Q86US8 1419 aaKnown RBP27.33■■□□□ 1.97
CMTM3-207ENST00000564060 RGPD2P0DJD1 1756 aa27.33■■□□□ 1.97
CMTM3-207ENST00000564060 RRS1Q15050 365 aaKnown RBP27.33■■□□□ 1.97
CMTM3-207ENST00000564060 PANK3Q9H999 370 aa27.33■■□□□ 1.97
CMTM3-207ENST00000564060 TNS2Q63HR2 1409 aa27.33■■□□□ 1.96
CMTM3-207ENST00000564060 FLT4P35916 1363 aa27.32■■□□□ 1.96
CMTM3-207ENST00000564060 FBLN1P23142 703 aa27.31■■□□□ 1.96
CMTM3-207ENST00000564060 NSD2O96028 1365 aa27.31■■□□□ 1.96
CMTM3-207ENST00000564060 EXOC5O00471 708 aa27.3■■□□□ 1.96
CMTM3-207ENST00000564060 IL2RBP14784 551 aa27.3■■□□□ 1.96
CMTM3-207ENST00000564060 DEFB132Q7Z7B7 95 aa27.3■■□□□ 1.96
CMTM3-207ENST00000564060 LTV1Q96GA3 475 aaPredicted RBP27.3■■□□□ 1.96
CMTM3-207ENST00000564060 KIF7Q2M1P5 1343 aa27.29■■□□□ 1.96
CMTM3-207ENST00000564060 TRIM37O94972 964 aa27.28■■□□□ 1.96
CMTM3-207ENST00000564060 INSRP06213 1382 aa27.27■■□□□ 1.96
CMTM3-207ENST00000564060 BCL9O00512 1426 aa27.26■■□□□ 1.95
CMTM3-207ENST00000564060 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
CMTM3-207ENST00000564060 PARD3Q8TEW0 1356 aa27.23■■□□□ 1.95
CMTM3-207ENST00000564060 RGPD3A6NKT7 1758 aaPredicted RBP27.23■■□□□ 1.95
CMTM3-207ENST00000564060 RGPD4Q7Z3J3 1758 aa27.23■■□□□ 1.95
CMTM3-207ENST00000564060 MARCH10Q8NA82 808 aaPredicted RBP27.22■■□□□ 1.95
CMTM3-207ENST00000564060 EN1Q05925 392 aaPredicted RBP27.21■■□□□ 1.95
CMTM3-207ENST00000564060 EMILIN1Q9Y6C2 1016 aa27.21■■□□□ 1.95
CMTM3-207ENST00000564060 APBA3O96018 575 aa27.2■■□□□ 1.94
CMTM3-207ENST00000564060 HSP90AB2PQ58FF8 381 aa27.2■■□□□ 1.94
CMTM3-207ENST00000564060 RREB1Q92766 1687 aa27.19■■□□□ 1.94
CMTM3-207ENST00000564060 KAT6BQ8WYB5 2073 aa27.18■■□□□ 1.94
CMTM3-207ENST00000564060 PPM1GO15355 546 aaPredicted RBP27.18■■□□□ 1.94
CMTM3-207ENST00000564060 NHSQ6T4R5 1651 aa27.17■■□□□ 1.94
CMTM3-207ENST00000564060 WASHC2AQ641Q2 1341 aa27.17■■□□□ 1.94
CMTM3-207ENST00000564060 SHANK3Q9BYB0 1731 aa27.16■■□□□ 1.94
CMTM3-207ENST00000564060 NBPF6Q5VWK0 638 aa27.15■■□□□ 1.94
CMTM3-207ENST00000564060 NBPF4Q96M43 638 aa27.15■■□□□ 1.94
CMTM3-207ENST00000564060 BCL11BQ9C0K0 894 aaPredicted RBP27.15■■□□□ 1.94
CMTM3-207ENST00000564060 POLKQ9UBT6 870 aa27.15■■□□□ 1.94
CMTM3-207ENST00000564060 TNNT2P45379 298 aaPredicted RBP27.14■■□□□ 1.94
CMTM3-207ENST00000564060 MORC1Q86VD1 984 aa27.14■■□□□ 1.94
CMTM3-207ENST00000564060 MEGF6O75095 1541 aa27.13■■□□□ 1.93
CMTM3-207ENST00000564060 EZH2Q15910 746 aaKnown RBP27.13■■□□□ 1.93
CMTM3-207ENST00000564060 RAPGEF4Q8WZA2 1011 aa27.13■■□□□ 1.93
CMTM3-207ENST00000564060 CAMKK2Q96RR4 588 aa27.13■■□□□ 1.93
CMTM3-207ENST00000564060 NUP188Q5SRE5 1749 aa27.13■■□□□ 1.93
CMTM3-207ENST00000564060 TATP17735 454 aaPredicted RBP27.09■■□□□ 1.93
CMTM3-207ENST00000564060 AMER1Q5JTC6 1135 aaPredicted RBP27.09■■□□□ 1.93
CMTM3-207ENST00000564060 USHBP1Q8N6Y0 703 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms