RNA–Protein interactions for RNA: ENST00000563732.5

PPP4C-207, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 2

Gene PPP4C, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-207ENST00000563732 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
PPP4C-207ENST00000563732 BTG4Q9NY30 223 aa28.68■■■□□ 2.18
PPP4C-207ENST00000563732 CC2D1BQ5T0F9 858 aaKnown RBP28.66■■■□□ 2.18
PPP4C-207ENST00000563732 UNC5CLQ8IV45 518 aa28.66■■■□□ 2.18
PPP4C-207ENST00000563732 USP21Q9UK80 565 aa28.66■■■□□ 2.18
PPP4C-207ENST00000563732 EMILIN1Q9Y6C2 1016 aa28.66■■■□□ 2.18
PPP4C-207ENST00000563732 POLKQ9UBT6 870 aa28.64■■■□□ 2.18
PPP4C-207ENST00000563732 RTL1A6NKG5 1358 aa28.62■■■□□ 2.17
PPP4C-207ENST00000563732 HOXC9P31274 260 aa28.61■■■□□ 2.17
PPP4C-207ENST00000563732 TNNT2P45379 298 aaPredicted RBP28.61■■■□□ 2.17
PPP4C-207ENST00000563732 IP6K1Q92551 441 aa28.61■■■□□ 2.17
PPP4C-207ENST00000563732 ZBTB7CA1YPR0 619 aa28.6■■■□□ 2.17
PPP4C-207ENST00000563732 MORC1Q86VD1 984 aa28.6■■■□□ 2.17
PPP4C-207ENST00000563732 RGPD2P0DJD1 1756 aa28.6■■■□□ 2.17
PPP4C-207ENST00000563732 VPS72Q15906 364 aa28.59■■■□□ 2.17
PPP4C-207ENST00000563732 PARD3Q8TEW0 1356 aa28.59■■■□□ 2.17
PPP4C-207ENST00000563732 BLMP54132 1417 aaPredicted RBP28.59■■■□□ 2.17
PPP4C-207ENST00000563732 ZNF772Q68DY9 489 aaPredicted RBP28.58■■■□□ 2.17
PPP4C-207ENST00000563732 LARP1Q6PKG0 1096 aaKnown RBP28.58■■■□□ 2.17
PPP4C-207ENST00000563732 PHF23Q9BUL5 403 aaPredicted RBP28.58■■■□□ 2.17
PPP4C-207ENST00000563732 QTRT2Q9H974 415 aaKnown RBP28.57■■■□□ 2.16
PPP4C-207ENST00000563732 KIF24Q5T7B8 1368 aa28.57■■■□□ 2.16
PPP4C-207ENST00000563732 ERBB3P21860 1342 aa28.56■■■□□ 2.16
PPP4C-207ENST00000563732 FAM208AQ9UK61 1670 aaKnown RBP28.56■■■□□ 2.16
PPP4C-207ENST00000563732 FLT4P35916 1363 aa28.55■■■□□ 2.16
PPP4C-207ENST00000563732 SPATA31A5Q5VU36 1347 aa28.55■■■□□ 2.16
PPP4C-207ENST00000563732 SPATA31A7Q8IWB4 1347 aa28.55■■■□□ 2.16
PPP4C-207ENST00000563732 HSP90AB2PQ58FF8 381 aa28.55■■■□□ 2.16
PPP4C-207ENST00000563732 COL3A1P02461 1466 aaPredicted RBP28.54■■■□□ 2.16
PPP4C-207ENST00000563732 CDK12Q9NYV4 1490 aaPredicted RBP28.54■■■□□ 2.16
PPP4C-207ENST00000563732 INSRP06213 1382 aa28.54■■■□□ 2.16
PPP4C-207ENST00000563732 TRPC5Q9UL62 973 aaPredicted RBP28.54■■■□□ 2.16
PPP4C-207ENST00000563732 WNK3Q9BYP7 1800 aa28.53■■■□□ 2.16
PPP4C-207ENST00000563732 WDR17Q8IZU2 1322 aa28.53■■■□□ 2.16
PPP4C-207ENST00000563732 CNGB1Q14028 1251 aaPredicted RBP28.53■■■□□ 2.16
PPP4C-207ENST00000563732 STRN4Q9NRL3 753 aa28.53■■■□□ 2.16
PPP4C-207ENST00000563732 THSD7AQ9UPZ6 1657 aa28.53■■■□□ 2.16
PPP4C-207ENST00000563732 SPATA31A1Q5TZJ5 1347 aa28.52■■■□□ 2.16
PPP4C-207ENST00000563732 ANKRD24Q8TF21 1146 aa28.51■■■□□ 2.15
PPP4C-207ENST00000563732 GJD4Q96KN9 370 aaPredicted RBP28.51■■■□□ 2.15
PPP4C-207ENST00000563732 CRB1P82279 1406 aa28.51■■■□□ 2.15
PPP4C-207ENST00000563732 AMPHP49418 695 aa28.49■■■□□ 2.15
PPP4C-207ENST00000563732 RGS12O14924 1447 aa28.49■■■□□ 2.15
PPP4C-207ENST00000563732 NCAPD2Q15021 1401 aa28.49■■■□□ 2.15
PPP4C-207ENST00000563732 RGPD1P0DJD0 1748 aa28.49■■■□□ 2.15
PPP4C-207ENST00000563732 ILDR2Q71H61 639 aa28.48■■■□□ 2.15
PPP4C-207ENST00000563732 DISP2A7MBM2 1401 aa28.47■■■□□ 2.15
PPP4C-207ENST00000563732 PPP2R1AP30153 589 aa28.47■■■□□ 2.15
PPP4C-207ENST00000563732 RBM6P78332 1123 aaKnown RBP28.46■■■□□ 2.15
PPP4C-207ENST00000563732 ONECUT3O60422 494 aaPredicted RBP28.45■■■□□ 2.14
PPP4C-207ENST00000563732 MTHFSP49914 203 aa28.45■■■□□ 2.14
PPP4C-207ENST00000563732 BRWD3Q6RI45 1802 aa28.43■■■□□ 2.14
PPP4C-207ENST00000563732 EIF4A2Q14240 407 aaKnown RBP28.43■■■□□ 2.14
PPP4C-207ENST00000563732 CARD10Q9BWT7 1032 aa28.43■■■□□ 2.14
PPP4C-207ENST00000563732 PPM1GO15355 546 aaPredicted RBP28.42■■■□□ 2.14
PPP4C-207ENST00000563732 EVA1CP58658 441 aa28.42■■■□□ 2.14
PPP4C-207ENST00000563732 NBPF6Q5VWK0 638 aa28.42■■■□□ 2.14
PPP4C-207ENST00000563732 LTV1Q96GA3 475 aaPredicted RBP28.42■■■□□ 2.14
PPP4C-207ENST00000563732 NBPF4Q96M43 638 aa28.42■■■□□ 2.14
PPP4C-207ENST00000563732 RXRBP28702 533 aa28.41■■■□□ 2.14
PPP4C-207ENST00000563732 PARP4Q9UKK3 1724 aaKnown RBP28.4■■■□□ 2.14
PPP4C-207ENST00000563732 PRKRIP1Q9H875 184 aaPredicted RBP28.4■■■□□ 2.14
PPP4C-207ENST00000563732 LRRC37A3O60309 1634 aa28.4■■■□□ 2.14
PPP4C-207ENST00000563732 IL13P35225 146 aa28.38■■■□□ 2.13
PPP4C-207ENST00000563732 FAM98CQ17RN3 349 aaKnown RBP28.38■■■□□ 2.13
PPP4C-207ENST00000563732 BARGINQ6ZT62 677 aa28.38■■■□□ 2.13
PPP4C-207ENST00000563732 TOM1L2Q6ZVM7 507 aa28.38■■■□□ 2.13
PPP4C-207ENST00000563732 EP400Q96L91 3159 aa28.38■■■□□ 2.13
PPP4C-207ENST00000563732 TCP11L2Q8N4U5 519 aa28.37■■■□□ 2.13
PPP4C-207ENST00000563732 USP35Q9P2H5 1018 aa28.37■■■□□ 2.13
PPP4C-207ENST00000563732 SHANK3Q9BYB0 1731 aa28.36■■■□□ 2.13
PPP4C-207ENST00000563732 EYA1Q99502 592 aa28.36■■■□□ 2.13
PPP4C-207ENST00000563732 CCDC9Q9Y3X0 531 aaKnown RBP28.36■■■□□ 2.13
PPP4C-207ENST00000563732 MEGF6O75095 1541 aa28.36■■■□□ 2.13
PPP4C-207ENST00000563732 RALBP1Q15311 655 aa28.35■■■□□ 2.13
PPP4C-207ENST00000563732 USHBP1Q8N6Y0 703 aa28.35■■■□□ 2.13
PPP4C-207ENST00000563732 CSB-PGBD3P0DP91 1061 aa28.34■■■□□ 2.13
PPP4C-207ENST00000563732 NLRP2Q9NX02 1062 aa28.34■■■□□ 2.13
PPP4C-207ENST00000563732 IGSF1Q8N6C5 1336 aa28.34■■■□□ 2.13
PPP4C-207ENST00000563732 THRAP3Q9Y2W1 955 aaKnown RBP28.33■■■□□ 2.13
PPP4C-207ENST00000563732 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
PPP4C-207ENST00000563732 MYBBP1AQ9BQG0 1328 aaKnown RBP28.28■■■□□ 2.12
PPP4C-207ENST00000563732 KDRP35968 1356 aa28.27■■■□□ 2.12
PPP4C-207ENST00000563732 PKD1L3Q7Z443 1732 aa28.27■■■□□ 2.12
PPP4C-207ENST00000563732 AEBP1Q8IUX7 1158 aa28.27■■■□□ 2.12
PPP4C-207ENST00000563732 OVOS2A0A0G2JMS6 1433 aa28.26■■■□□ 2.12
PPP4C-207ENST00000563732 TNS2Q63HR2 1409 aa28.25■■■□□ 2.11
PPP4C-207ENST00000563732 CCDC184Q52MB2 194 aa28.24■■■□□ 2.11
PPP4C-207ENST00000563732 DIAPH1O60610 1272 aaKnown RBP28.22■■■□□ 2.11
PPP4C-207ENST00000563732 IL2RBP14784 551 aa28.21■■■□□ 2.11
PPP4C-207ENST00000563732 FAM182BQ5T319 152 aa28.17■■■□□ 2.1
PPP4C-207ENST00000563732 MARCH10Q8NA82 808 aaPredicted RBP28.17■■■□□ 2.1
PPP4C-207ENST00000563732 CDCA7Q9BWT1 371 aaPredicted RBP28.17■■■□□ 2.1
PPP4C-207ENST00000563732 SULT6B1Q6IMI4 303 aa28.15■■■□□ 2.1
PPP4C-207ENST00000563732 KRT27Q7Z3Y8 459 aa28.14■■■□□ 2.1
PPP4C-207ENST00000563732 HMOX1P09601 288 aa28.13■■■□□ 2.09
PPP4C-207ENST00000563732 SBF2Q86WG5 1849 aa28.13■■■□□ 2.09
PPP4C-207ENST00000563732 DDB1Q16531 1140 aa28.12■■■□□ 2.09
PPP4C-207ENST00000563732 CFAP53Q96M91 514 aa28.12■■■□□ 2.09
PPP4C-207ENST00000563732 PLEKHG2Q9H7P9 1386 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms