RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
LINC01416-201ENST00000563553 ARHGAP9Q9BRR9 750 aa6.69□□□□□ -1.34
LINC01416-201ENST00000563553 ZC3H4Q9UPT8 1303 aaKnown RBP6.69□□□□□ -1.34
LINC01416-201ENST00000563553 CCDC116Q8IYX3 515 aa6.68□□□□□ -1.34
LINC01416-201ENST00000563553 GPR37L1O60883 481 aa6.67□□□□□ -1.34
LINC01416-201ENST00000563553 C6orf118Q5T5N4 469 aa6.67□□□□□ -1.34
LINC01416-201ENST00000563553 PPP1R26Q5T8A7 1209 aaPredicted RBP6.67□□□□□ -1.34
LINC01416-201ENST00000563553 GJD4Q96KN9 370 aaPredicted RBP6.67□□□□□ -1.34
LINC01416-201ENST00000563553 SOS2Q07890 1332 aaPredicted RBP6.67□□□□□ -1.34
LINC01416-201ENST00000563553 CBLBQ13191 982 aa6.67□□□□□ -1.34
LINC01416-201ENST00000563553 NPAS3Q8IXF0 933 aa6.67□□□□□ -1.34
LINC01416-201ENST00000563553 ADAM32Q8TC27 787 aa6.67□□□□□ -1.34
LINC01416-201ENST00000563553 KCTD15Q96SI1 283 aaPredicted RBP6.67□□□□□ -1.34
LINC01416-201ENST00000563553 DNMT3LQ9UJW3 386 aa6.67□□□□□ -1.34
LINC01416-201ENST00000563553 GMPRP36959 345 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 SCARF1Q14162 830 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 NEUROD2Q15784 382 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 INTS6LQ5JSJ4 861 aaKnown RBP6.66□□□□□ -1.34
LINC01416-201ENST00000563553 Q6ZVU0 165 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 GPSM3Q9Y4H4 160 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 EMILIN1Q9Y6C2 1016 aa6.66□□□□□ -1.34
LINC01416-201ENST00000563553 SLC10A4Q96EP9 437 aa6.65□□□□□ -1.35
LINC01416-201ENST00000563553 VSIG8P0DPA2 414 aa6.64□□□□□ -1.35
LINC01416-201ENST00000563553 BMP2P12643 396 aa6.63□□□□□ -1.35
LINC01416-201ENST00000563553 PTK2Q05397 1052 aa6.63□□□□□ -1.35
LINC01416-201ENST00000563553 ZBTB33Q86T24 672 aa6.63□□□□□ -1.35
LINC01416-201ENST00000563553 KDF1Q8NAX2 398 aaPredicted RBP6.63□□□□□ -1.35
LINC01416-201ENST00000563553 SOCS7O14512 581 aa6.62□□□□□ -1.35
LINC01416-201ENST00000563553 TMPRSS4Q9NRS4 437 aa6.62□□□□□ -1.35
LINC01416-201ENST00000563553 ESPNB1AK53 854 aa6.62□□□□□ -1.35
LINC01416-201ENST00000563553 PCMTD1Q96MG8 357 aaPredicted RBP6.62□□□□□ -1.35
LINC01416-201ENST00000563553 SPINT1O43278 529 aa6.61□□□□□ -1.35
LINC01416-201ENST00000563553 LILRA1O75019 489 aa6.61□□□□□ -1.35
LINC01416-201ENST00000563553 IRF7Q92985 503 aa6.61□□□□□ -1.35
LINC01416-201ENST00000563553 TSEN34Q9BSV6 310 aaKnown RBP6.61□□□□□ -1.35
LINC01416-201ENST00000563553 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
LINC01416-201ENST00000563553 ATP1B4Q9UN42 357 aaPredicted RBP6.61□□□□□ -1.35
LINC01416-201ENST00000563553 MAN1A2O60476 641 aa6.61□□□□□ -1.35
LINC01416-201ENST00000563553 SLC16A10Q8TF71 515 aa6.61□□□□□ -1.35
LINC01416-201ENST00000563553 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
LINC01416-201ENST00000563553 ZNF784Q8NCA9 323 aaPredicted RBP6.6□□□□□ -1.35
LINC01416-201ENST00000563553 PPFIA3O75145 1194 aa6.6□□□□□ -1.35
LINC01416-201ENST00000563553 FBXO45P0C2W1 286 aa6.6□□□□□ -1.35
LINC01416-201ENST00000563553 ADD1P35611 737 aaKnown RBP6.6□□□□□ -1.35
LINC01416-201ENST00000563553 TMEM259Q4ZIN3 620 aa6.6□□□□□ -1.35
LINC01416-201ENST00000563553 ERVH48-1M5A8F1 160 aa6.59□□□□□ -1.35
LINC01416-201ENST00000563553 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
LINC01416-201ENST00000563553 MTMR14Q8NCE2 650 aa6.59□□□□□ -1.35
LINC01416-201ENST00000563553 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
LINC01416-201ENST00000563553 STK17AQ9UEE5 414 aa6.59□□□□□ -1.35
LINC01416-201ENST00000563553 TTLL8A6PVC2 850 aa6.59□□□□□ -1.36
LINC01416-201ENST00000563553 CTSOP43234 321 aaPredicted RBP6.59□□□□□ -1.36
LINC01416-201ENST00000563553 NBPF20Q3BBV1 942 aa6.58□□□□□ -1.36
LINC01416-201ENST00000563553 TPRNQ4KMQ1 711 aa6.58□□□□□ -1.36
LINC01416-201ENST00000563553 UPP2O95045 317 aa6.58□□□□□ -1.36
LINC01416-201ENST00000563553 DHX9Q08211 1270 aaKnown RBP6.58□□□□□ -1.36
LINC01416-201ENST00000563553 KRT76Q01546 638 aa6.57□□□□□ -1.36
LINC01416-201ENST00000563553 PTSQ03393 145 aa6.57□□□□□ -1.36
LINC01416-201ENST00000563553 INSM2Q96T92 566 aaPredicted RBP6.57□□□□□ -1.36
LINC01416-201ENST00000563553 FIGNL2A6NMB9 653 aa6.56□□□□□ -1.36
LINC01416-201ENST00000563553 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
LINC01416-201ENST00000563553 RAB15P59190 212 aa6.56□□□□□ -1.36
LINC01416-201ENST00000563553 SNRKQ9NRH2 765 aa6.56□□□□□ -1.36
LINC01416-201ENST00000563553 RELBQ01201 579 aa6.56□□□□□ -1.36
LINC01416-201ENST00000563553 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
LINC01416-201ENST00000563553 GPR161Q8N6U8 529 aaKnown RBP6.56□□□□□ -1.36
LINC01416-201ENST00000563553 SENP3-EIF4A1A0A087X0R7 540 aa6.55□□□□□ -1.36
LINC01416-201ENST00000563553 DZIP3Q86Y13 1208 aaKnown RBP6.55□□□□□ -1.36
LINC01416-201ENST00000563553 RNF217Q8TC41 542 aa6.55□□□□□ -1.36
LINC01416-201ENST00000563553 ADH1AP07327 375 aa6.55□□□□□ -1.36
LINC01416-201ENST00000563553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.55□□□□□ -1.36
LINC01416-201ENST00000563553 ZNF395Q9H8N7 513 aaPredicted RBP6.55□□□□□ -1.36
LINC01416-201ENST00000563553 GIGYF1O75420 1035 aaPredicted RBP6.54□□□□□ -1.36
LINC01416-201ENST00000563553 SLC35F4A4IF30 521 aa6.54□□□□□ -1.36
LINC01416-201ENST00000563553 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
LINC01416-201ENST00000563553 SEPT12Q8IYM1 358 aa6.53□□□□□ -1.36
LINC01416-201ENST00000563553 PNMA1Q8ND90 353 aa6.53□□□□□ -1.36
LINC01416-201ENST00000563553 BANK1Q8NDB2 785 aa6.53□□□□□ -1.36
LINC01416-201ENST00000563553 CYLDQ9NQC7 956 aa6.53□□□□□ -1.36
LINC01416-201ENST00000563553 CCDC155Q8N6L0 562 aa6.52□□□□□ -1.37
LINC01416-201ENST00000563553 SCTRP47872 440 aa6.51□□□□□ -1.37
LINC01416-201ENST00000563553 PCDHB9Q9Y5E1 797 aa6.51□□□□□ -1.37
LINC01416-201ENST00000563553 PTGIRP43119 386 aa6.51□□□□□ -1.37
LINC01416-201ENST00000563553 NANOS1Q8WY41 292 aaKnown RBP6.51□□□□□ -1.37
LINC01416-201ENST00000563553 NR1H3Q13133 447 aa6.5□□□□□ -1.37
LINC01416-201ENST00000563553 RNFT1Q5M7Z0 435 aa6.5□□□□□ -1.37
LINC01416-201ENST00000563553 ERVK-9P63128 1117 aa6.5□□□□□ -1.37
LINC01416-201ENST00000563553 POLMQ9NP87 494 aaPredicted RBP6.49□□□□□ -1.37
LINC01416-201ENST00000563553 NDUFB9Q9Y6M9 179 aa6.49□□□□□ -1.37
LINC01416-201ENST00000563553 ITGA6P23229 1130 aa6.49□□□□□ -1.37
LINC01416-201ENST00000563553 CUEDC1Q9NWM3 386 aaPredicted RBP6.49□□□□□ -1.37
LINC01416-201ENST00000563553 TBC1D2BQ9UPU7 963 aa6.48□□□□□ -1.37
LINC01416-201ENST00000563553 IRF5Q13568 498 aa6.48□□□□□ -1.37
LINC01416-201ENST00000563553 TRAK2O60296 914 aa6.47□□□□□ -1.37
LINC01416-201ENST00000563553 RNF144AP50876 292 aaPredicted RBP6.47□□□□□ -1.37
LINC01416-201ENST00000563553 OSBPL3Q9H4L5 887 aa6.47□□□□□ -1.37
LINC01416-201ENST00000563553 COL25A1Q9BXS0 654 aaPredicted RBP6.46□□□□□ -1.38
LINC01416-201ENST00000563553 ATP5J2-PTCD1G3V325 749 aa6.45□□□□□ -1.38
LINC01416-201ENST00000563553 PRKCSHP14314 528 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms