RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 USP47Q96K76 1375 aa21.42■■□□□ 1.02
LPCAT4-204ENST00000563240 USP31Q70CQ4 1352 aa21.39■■□□□ 1.02
LPCAT4-204ENST00000563240 WDR17Q8IZU2 1322 aa21.39■■□□□ 1.01
LPCAT4-204ENST00000563240 MON2Q7Z3U7 1717 aa21.39■■□□□ 1.01
LPCAT4-204ENST00000563240 SLC24A1O60721 1099 aa21.39■■□□□ 1.01
LPCAT4-204ENST00000563240 TMF1P82094 1093 aa21.39■■□□□ 1.01
LPCAT4-204ENST00000563240 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
LPCAT4-204ENST00000563240 CCER1Q8TC90 406 aaPredicted RBP21.37■■□□□ 1.01
LPCAT4-204ENST00000563240 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
LPCAT4-204ENST00000563240 COL18A1P39060 1754 aa21.36■■□□□ 1.01
LPCAT4-204ENST00000563240 NFAT5O94916 1531 aa21.36■■□□□ 1.01
LPCAT4-204ENST00000563240 APBA3O96018 575 aa21.36■■□□□ 1.01
LPCAT4-204ENST00000563240 DDB1Q16531 1140 aa21.36■■□□□ 1.01
LPCAT4-204ENST00000563240 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
LPCAT4-204ENST00000563240 EZH2Q15910 746 aaKnown RBP21.35■■□□□ 1.01
LPCAT4-204ENST00000563240 PSDA5PKW4 1024 aaPredicted RBP21.34■■□□□ 1.01
LPCAT4-204ENST00000563240 CARD10Q9BWT7 1032 aa21.33■■□□□ 1.01
LPCAT4-204ENST00000563240 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
LPCAT4-204ENST00000563240 COG3Q96JB2 828 aa21.32■■□□□ 1
LPCAT4-204ENST00000563240 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
LPCAT4-204ENST00000563240 FBLN1P23142 703 aa21.31■■□□□ 1
LPCAT4-204ENST00000563240 RGPD1P0DJD0 1748 aa21.31■■□□□ 1
LPCAT4-204ENST00000563240 RGPD5Q99666 1765 aa21.31■■□□□ 1
LPCAT4-204ENST00000563240 CAMKK2Q96RR4 588 aa21.3■■□□□ 1
LPCAT4-204ENST00000563240 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
LPCAT4-204ENST00000563240 CDCA8Q53HL2 280 aa21.29■■□□□ 1
LPCAT4-204ENST00000563240 ANKRD24Q8TF21 1146 aa21.29■■□□□ 1
LPCAT4-204ENST00000563240 LTV1Q96GA3 475 aaPredicted RBP21.29■■□□□ 1
LPCAT4-204ENST00000563240 CDCA7Q9BWT1 371 aaPredicted RBP21.29■■□□□ 1
LPCAT4-204ENST00000563240 MARCH10Q8NA82 808 aaPredicted RBP21.28■■□□□ 1
LPCAT4-204ENST00000563240 OVOS2A0A0J9YW53 1432 aa21.28■■□□□ 1
LPCAT4-204ENST00000563240 OVOS2Q6IE36 1432 aa21.28■■□□□ 1
LPCAT4-204ENST00000563240 ERBB3P21860 1342 aa21.28■■□□□ 1
LPCAT4-204ENST00000563240 EXOC5O00471 708 aa21.27■■□□□ 1
LPCAT4-204ENST00000563240 POLR3GLQ9BT43 218 aa21.27■■□□□ 1
LPCAT4-204ENST00000563240 GGNBP2Q9H3C7 697 aa21.27■■□□□ 1
LPCAT4-204ENST00000563240 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
LPCAT4-204ENST00000563240 CCDC7Q96M83 1385 aa21.26■□□□□ 0.99
LPCAT4-204ENST00000563240 R3HDM1Q15032 1099 aaKnown RBP21.26■□□□□ 0.99
LPCAT4-204ENST00000563240 DISP2A7MBM2 1401 aa21.26■□□□□ 0.99
LPCAT4-204ENST00000563240 TNS1Q9HBL0 1735 aaKnown RBP21.26■□□□□ 0.99
LPCAT4-204ENST00000563240 OVOS2A0A0G2JMS6 1433 aa21.25■□□□□ 0.99
LPCAT4-204ENST00000563240 PTF1AQ7RTS3 328 aa21.25■□□□□ 0.99
LPCAT4-204ENST00000563240 IP6K1Q92551 441 aa21.25■□□□□ 0.99
LPCAT4-204ENST00000563240 C11orf95C9JLR9 678 aaPredicted RBP21.24■□□□□ 0.99
LPCAT4-204ENST00000563240 FYB1O15117 783 aa21.24■□□□□ 0.99
LPCAT4-204ENST00000563240 AMPHP49418 695 aa21.24■□□□□ 0.99
LPCAT4-204ENST00000563240 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
LPCAT4-204ENST00000563240 USP54Q70EL1 1684 aa21.24■□□□□ 0.99
LPCAT4-204ENST00000563240 MAP3K19Q56UN5 1328 aa21.23■□□□□ 0.99
LPCAT4-204ENST00000563240 ABCC6O95255 1503 aa21.22■□□□□ 0.99
LPCAT4-204ENST00000563240 LTN1O94822 1766 aa21.22■□□□□ 0.99
LPCAT4-204ENST00000563240 IL2RBP14784 551 aa21.21■□□□□ 0.99
LPCAT4-204ENST00000563240 RRS1Q15050 365 aaKnown RBP21.21■□□□□ 0.99
LPCAT4-204ENST00000563240 HOXC9P31274 260 aa21.2■□□□□ 0.98
LPCAT4-204ENST00000563240 CARD14Q9BXL6 1004 aa21.2■□□□□ 0.98
LPCAT4-204ENST00000563240 BCL11BQ9C0K0 894 aaPredicted RBP21.19■□□□□ 0.98
LPCAT4-204ENST00000563240 PARD3Q8TEW0 1356 aa21.19■□□□□ 0.98
LPCAT4-204ENST00000563240 HSPA5P11021 654 aaKnown RBP21.18■□□□□ 0.98
LPCAT4-204ENST00000563240 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
LPCAT4-204ENST00000563240 PEAK1Q9H792 1746 aa21.17■□□□□ 0.98
LPCAT4-204ENST00000563240 WNK3Q9BYP7 1800 aa21.16■□□□□ 0.98
LPCAT4-204ENST00000563240 KCNQ2O43526 872 aa21.16■□□□□ 0.98
LPCAT4-204ENST00000563240 NBPF14Q5TI25 921 aa21.16■□□□□ 0.98
LPCAT4-204ENST00000563240 ACSBG1Q96GR2 724 aa21.16■□□□□ 0.98
LPCAT4-204ENST00000563240 TNS2Q63HR2 1409 aa21.15■□□□□ 0.98
LPCAT4-204ENST00000563240 SRCAPQ6ZRS2 3230 aa21.15■□□□□ 0.98
LPCAT4-204ENST00000563240 NSD3Q9BZ95 1437 aa21.14■□□□□ 0.98
LPCAT4-204ENST00000563240 DDX54Q8TDD1 881 aaKnown RBP21.14■□□□□ 0.97
LPCAT4-204ENST00000563240 PLSCR1O15162 318 aa21.13■□□□□ 0.97
LPCAT4-204ENST00000563240 HSP90AB2PQ58FF8 381 aa21.12■□□□□ 0.97
LPCAT4-204ENST00000563240 USHBP1Q8N6Y0 703 aa21.11■□□□□ 0.97
LPCAT4-204ENST00000563240 BCL9O00512 1426 aa21.11■□□□□ 0.97
LPCAT4-204ENST00000563240 PPM1GO15355 546 aaPredicted RBP21.1■□□□□ 0.97
LPCAT4-204ENST00000563240 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
LPCAT4-204ENST00000563240 PROM2Q8N271 834 aa21.1■□□□□ 0.97
LPCAT4-204ENST00000563240 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
LPCAT4-204ENST00000563240 SBF2Q86WG5 1849 aa21.09■□□□□ 0.97
LPCAT4-204ENST00000563240 MYOM1P52179 1685 aa21.09■□□□□ 0.97
LPCAT4-204ENST00000563240 TXNRD1Q16881 649 aa21.08■□□□□ 0.97
LPCAT4-204ENST00000563240 EMILIN1Q9Y6C2 1016 aa21.08■□□□□ 0.97
LPCAT4-204ENST00000563240 RTL1A6NKG5 1358 aa21.08■□□□□ 0.96
LPCAT4-204ENST00000563240 RREB1Q92766 1687 aa21.07■□□□□ 0.96
LPCAT4-204ENST00000563240 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
LPCAT4-204ENST00000563240 CGNL1Q0VF96 1302 aa21.06■□□□□ 0.96
LPCAT4-204ENST00000563240 PANK3Q9H999 370 aa21.06■□□□□ 0.96
LPCAT4-204ENST00000563240 ANO8Q9HCE9 1232 aaPredicted RBP21.06■□□□□ 0.96
LPCAT4-204ENST00000563240 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
LPCAT4-204ENST00000563240 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
LPCAT4-204ENST00000563240 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
LPCAT4-204ENST00000563240 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
LPCAT4-204ENST00000563240 SYTL4Q96C24 671 aaPredicted RBP21.04■□□□□ 0.96
LPCAT4-204ENST00000563240 FLT4P35916 1363 aa21.04■□□□□ 0.96
LPCAT4-204ENST00000563240 INSRP06213 1382 aa21.03■□□□□ 0.96
LPCAT4-204ENST00000563240 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
LPCAT4-204ENST00000563240 MEGF6O75095 1541 aa21.02■□□□□ 0.96
LPCAT4-204ENST00000563240 RGPD2P0DJD1 1756 aa21.02■□□□□ 0.96
LPCAT4-204ENST00000563240 LRP5O75197 1615 aa21.01■□□□□ 0.95
LPCAT4-204ENST00000563240 FAM208AQ9UK61 1670 aaKnown RBP21.01■□□□□ 0.95
LPCAT4-204ENST00000563240 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms