RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GPSM3Q9Y4H4 160 aa6.94□□□□□ -1.3
SHCBP1-202ENST00000563219 EMILIN1Q9Y6C2 1016 aa6.94□□□□□ -1.3
SHCBP1-202ENST00000563219 PTK2Q05397 1052 aa6.93□□□□□ -1.3
SHCBP1-202ENST00000563219 ZBTB33Q86T24 672 aa6.93□□□□□ -1.3
SHCBP1-202ENST00000563219 CCDC116Q8IYX3 515 aa6.93□□□□□ -1.3
SHCBP1-202ENST00000563219 EPS8L1Q8TE68 723 aa6.93□□□□□ -1.3
SHCBP1-202ENST00000563219 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
SHCBP1-202ENST00000563219 USP17L8P0C7I0 530 aa6.92□□□□□ -1.3
SHCBP1-202ENST00000563219 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
SHCBP1-202ENST00000563219 PCMTD1Q96MG8 357 aaPredicted RBP6.92□□□□□ -1.3
SHCBP1-202ENST00000563219 HMX1Q9NP08 348 aaPredicted RBP6.92□□□□□ -1.3
SHCBP1-202ENST00000563219 CDV3Q9UKY7 258 aaKnown RBP6.92□□□□□ -1.3
SHCBP1-202ENST00000563219 H3BM21 787 aa6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 UPP2O95045 317 aa6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 TMEM259Q4ZIN3 620 aa6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 C6orf118Q5T5N4 469 aa6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
SHCBP1-202ENST00000563219 SOBPA7XYQ1 873 aa6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 BMP2P12643 396 aa6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 INSM1Q01101 510 aaPredicted RBP6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 PPP1R26Q5T8A7 1209 aaPredicted RBP6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 ADAM32Q8TC27 787 aa6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 IRF7Q92985 503 aa6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 TSEN34Q9BSV6 310 aaKnown RBP6.9□□□□□ -1.3
SHCBP1-202ENST00000563219 MAN1A2O60476 641 aa6.89□□□□□ -1.31
SHCBP1-202ENST00000563219 VEGFBP49765 207 aa6.89□□□□□ -1.31
SHCBP1-202ENST00000563219 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
SHCBP1-202ENST00000563219 SOS2Q07890 1332 aaPredicted RBP6.88□□□□□ -1.31
SHCBP1-202ENST00000563219 DHX9Q08211 1270 aaKnown RBP6.88□□□□□ -1.31
SHCBP1-202ENST00000563219 Q6ZVU0 165 aa6.88□□□□□ -1.31
SHCBP1-202ENST00000563219 GMPRP36959 345 aa6.87□□□□□ -1.31
SHCBP1-202ENST00000563219 TRIM34Q9BYJ4 488 aa6.87□□□□□ -1.31
SHCBP1-202ENST00000563219 STK17AQ9UEE5 414 aa6.87□□□□□ -1.31
SHCBP1-202ENST00000563219 ERBB4Q15303 1308 aa6.86□□□□□ -1.31
SHCBP1-202ENST00000563219 CBLBQ13191 982 aa6.86□□□□□ -1.31
SHCBP1-202ENST00000563219 INTS6LQ5JSJ4 861 aaKnown RBP6.86□□□□□ -1.31
SHCBP1-202ENST00000563219 GTF3C3Q9Y5Q9 886 aa6.86□□□□□ -1.31
SHCBP1-202ENST00000563219 NBPF20Q3BBV1 942 aa6.85□□□□□ -1.31
SHCBP1-202ENST00000563219 DZIP3Q86Y13 1208 aaKnown RBP6.85□□□□□ -1.31
SHCBP1-202ENST00000563219 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
SHCBP1-202ENST00000563219 TTLL8A6PVC2 850 aa6.84□□□□□ -1.31
SHCBP1-202ENST00000563219 SPINT1O43278 529 aa6.84□□□□□ -1.31
SHCBP1-202ENST00000563219 GJD4Q96KN9 370 aaPredicted RBP6.84□□□□□ -1.31
SHCBP1-202ENST00000563219 VSIG8P0DPA2 414 aa6.83□□□□□ -1.32
SHCBP1-202ENST00000563219 ESPNB1AK53 854 aa6.82□□□□□ -1.32
SHCBP1-202ENST00000563219 PPFIA3O75145 1194 aa6.82□□□□□ -1.32
SHCBP1-202ENST00000563219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.82□□□□□ -1.32
SHCBP1-202ENST00000563219 TMPRSS4Q9NRS4 437 aa6.82□□□□□ -1.32
SHCBP1-202ENST00000563219 FIGNL2A6NMB9 653 aa6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 ZBBXA8MT70 800 aa6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 ZNF784Q8NCA9 323 aaPredicted RBP6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 BANK1Q8NDB2 785 aa6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 AGBL1Q96MI9 1066 aa6.81□□□□□ -1.32
SHCBP1-202ENST00000563219 LILRA1O75019 489 aa6.8□□□□□ -1.32
SHCBP1-202ENST00000563219 RAB15P59190 212 aa6.8□□□□□ -1.32
SHCBP1-202ENST00000563219 SEPT12Q8IYM1 358 aa6.8□□□□□ -1.32
SHCBP1-202ENST00000563219 FBXO45P0C2W1 286 aa6.79□□□□□ -1.32
SHCBP1-202ENST00000563219 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
SHCBP1-202ENST00000563219 RELBQ01201 579 aa6.79□□□□□ -1.32
SHCBP1-202ENST00000563219 PTSQ03393 145 aa6.79□□□□□ -1.32
SHCBP1-202ENST00000563219 ZSCAN1Q8NBB4 408 aa6.79□□□□□ -1.32
SHCBP1-202ENST00000563219 SOCS7O14512 581 aa6.78□□□□□ -1.32
SHCBP1-202ENST00000563219 CTSOP43234 321 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-202ENST00000563219 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-202ENST00000563219 TRIM52Q96A61 297 aa6.78□□□□□ -1.32
SHCBP1-202ENST00000563219 INSM2Q96T92 566 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-202ENST00000563219 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
SHCBP1-202ENST00000563219 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
SHCBP1-202ENST00000563219 GIGYF1O75420 1035 aaPredicted RBP6.77□□□□□ -1.33
SHCBP1-202ENST00000563219 ADH1AP07327 375 aa6.77□□□□□ -1.33
SHCBP1-202ENST00000563219 MCCD1P59942 119 aaPredicted RBP6.77□□□□□ -1.33
SHCBP1-202ENST00000563219 PCDHB9Q9Y5E1 797 aa6.77□□□□□ -1.33
SHCBP1-202ENST00000563219 SLC35F4A4IF30 521 aa6.76□□□□□ -1.33
SHCBP1-202ENST00000563219 PTGIRP43119 386 aa6.76□□□□□ -1.33
SHCBP1-202ENST00000563219 CCDC125Q86Z20 511 aa6.76□□□□□ -1.33
SHCBP1-202ENST00000563219 CCDC155Q8N6L0 562 aa6.76□□□□□ -1.33
SHCBP1-202ENST00000563219 MTMR14Q8NCE2 650 aa6.76□□□□□ -1.33
SHCBP1-202ENST00000563219 POLMQ9NP87 494 aaPredicted RBP6.76□□□□□ -1.33
SHCBP1-202ENST00000563219 NR1H3Q13133 447 aa6.75□□□□□ -1.33
SHCBP1-202ENST00000563219 RNF217Q8TC41 542 aa6.75□□□□□ -1.33
SHCBP1-202ENST00000563219 NANOS1Q8WY41 292 aaKnown RBP6.75□□□□□ -1.33
SHCBP1-202ENST00000563219 CYLDQ9NQC7 956 aa6.75□□□□□ -1.33
SHCBP1-202ENST00000563219 SNRKQ9NRH2 765 aa6.75□□□□□ -1.33
SHCBP1-202ENST00000563219 GPR37L1O60883 481 aa6.74□□□□□ -1.33
SHCBP1-202ENST00000563219 RNF20Q5VTR2 975 aa6.74□□□□□ -1.33
SHCBP1-202ENST00000563219 ERICH6Q7L0X2 663 aa6.74□□□□□ -1.33
SHCBP1-202ENST00000563219 GPR161Q8N6U8 529 aaKnown RBP6.74□□□□□ -1.33
SHCBP1-202ENST00000563219 NDUFB9Q9Y6M9 179 aa6.74□□□□□ -1.33
SHCBP1-202ENST00000563219 APBB1O00213 710 aa6.73□□□□□ -1.33
SHCBP1-202ENST00000563219 ZNF592Q92610 1267 aa6.73□□□□□ -1.33
SHCBP1-202ENST00000563219 ZNF330Q9Y3S2 320 aaPredicted RBP6.73□□□□□ -1.33
SHCBP1-202ENST00000563219 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
SHCBP1-202ENST00000563219 FLIIQ13045 1269 aa6.72□□□□□ -1.33
SHCBP1-202ENST00000563219 FOXD4L5Q5VV16 416 aaPredicted RBP6.72□□□□□ -1.33
SHCBP1-202ENST00000563219 SENP3-EIF4A1A0A087X0R7 540 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms