RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF592Q92610 1267 aa10.78□□□□□ -0.68
LINC00557-201ENST00000563184 MAFBQ9Y5Q3 323 aaPredicted RBP10.78□□□□□ -0.68
LINC00557-201ENST00000563184 ATP9BO43861 1147 aa10.77□□□□□ -0.69
LINC00557-201ENST00000563184 CD2BP2O95400 341 aaKnown RBP10.77□□□□□ -0.69
LINC00557-201ENST00000563184 SRPK2P78362 688 aaKnown RBP10.77□□□□□ -0.69
LINC00557-201ENST00000563184 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
LINC00557-201ENST00000563184 SLC10A4Q96EP9 437 aa10.77□□□□□ -0.69
LINC00557-201ENST00000563184 RFX1P22670 979 aa10.76□□□□□ -0.69
LINC00557-201ENST00000563184 VARSP26640 1264 aaKnown RBP10.76□□□□□ -0.69
LINC00557-201ENST00000563184 LMOD1P29536 600 aaPredicted RBP10.76□□□□□ -0.69
LINC00557-201ENST00000563184 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
LINC00557-201ENST00000563184 CHIC2Q9UKJ5 165 aa10.76□□□□□ -0.69
LINC00557-201ENST00000563184 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.74□□□□□ -0.69
LINC00557-201ENST00000563184 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
LINC00557-201ENST00000563184 SKIP12755 728 aa10.74□□□□□ -0.69
LINC00557-201ENST00000563184 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
LINC00557-201ENST00000563184 RNF135Q8IUD6 432 aa10.74□□□□□ -0.69
LINC00557-201ENST00000563184 ESPNB1AK53 854 aa10.73□□□□□ -0.69
LINC00557-201ENST00000563184 GDF9O60383 454 aa10.73□□□□□ -0.69
LINC00557-201ENST00000563184 TSGA10IPQ3SY00 556 aa10.73□□□□□ -0.69
LINC00557-201ENST00000563184 EHBP1Q8NDI1 1231 aa10.73□□□□□ -0.69
LINC00557-201ENST00000563184 CCDC85AQ96PX6 553 aaPredicted RBP10.73□□□□□ -0.69
LINC00557-201ENST00000563184 USP17L5A8MUK1 530 aa10.72□□□□□ -0.69
LINC00557-201ENST00000563184 SIAH2O43255 324 aa10.72□□□□□ -0.69
LINC00557-201ENST00000563184 PBXIP1Q96AQ6 731 aa10.72□□□□□ -0.69
LINC00557-201ENST00000563184 USP17L3A6NCW0 530 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 USP17L4A6NCW7 530 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 WNT7AO00755 349 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 PPP1R15AO75807 674 aaPredicted RBP10.71□□□□□ -0.69
LINC00557-201ENST00000563184 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 USP17L2Q6R6M4 530 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 USP17L1Q7RTZ2 530 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 PLPP7Q8NBV4 271 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 CDV3Q9UKY7 258 aaKnown RBP10.71□□□□□ -0.69
LINC00557-201ENST00000563184 MAP4K5Q9Y4K4 846 aa10.71□□□□□ -0.69
LINC00557-201ENST00000563184 NBPF20Q3BBV1 942 aa10.7□□□□□ -0.7
LINC00557-201ENST00000563184 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
LINC00557-201ENST00000563184 DEPDC4Q8N2C3 294 aa10.7□□□□□ -0.7
LINC00557-201ENST00000563184 CDK15Q96Q40 435 aa10.7□□□□□ -0.7
LINC00557-201ENST00000563184 KANK4Q5T7N3 995 aaPredicted RBP10.69□□□□□ -0.7
LINC00557-201ENST00000563184 MRGPRX2Q96LB1 330 aa10.69□□□□□ -0.7
LINC00557-201ENST00000563184 KCTD15Q96SI1 283 aaPredicted RBP10.69□□□□□ -0.7
LINC00557-201ENST00000563184 TLL2Q9Y6L7 1015 aa10.69□□□□□ -0.7
LINC00557-201ENST00000563184 INTS6LQ5JSJ4 861 aaKnown RBP10.68□□□□□ -0.7
LINC00557-201ENST00000563184 VASH1Q7L8A9 365 aaPredicted RBP10.68□□□□□ -0.7
LINC00557-201ENST00000563184 MPNDQ8N594 471 aa10.68□□□□□ -0.7
LINC00557-201ENST00000563184 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
LINC00557-201ENST00000563184 DGAT1O75907 488 aa10.67□□□□□ -0.7
LINC00557-201ENST00000563184 GRM5P41594 1212 aa10.67□□□□□ -0.7
LINC00557-201ENST00000563184 NCOA4Q13772 614 aa10.67□□□□□ -0.7
LINC00557-201ENST00000563184 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
LINC00557-201ENST00000563184 SEPT12Q8IYM1 358 aa10.67□□□□□ -0.7
LINC00557-201ENST00000563184 TNFRSF10AO00220 468 aa10.66□□□□□ -0.7
LINC00557-201ENST00000563184 MAP7D1Q3KQU3 841 aa10.66□□□□□ -0.7
LINC00557-201ENST00000563184 RNF20Q5VTR2 975 aa10.66□□□□□ -0.7
LINC00557-201ENST00000563184 CDCA7Q9BWT1 371 aaPredicted RBP10.66□□□□□ -0.7
LINC00557-201ENST00000563184 LCE2BO14633 110 aa10.65□□□□□ -0.7
LINC00557-201ENST00000563184 ARID5BQ14865 1188 aa10.65□□□□□ -0.7
LINC00557-201ENST00000563184 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
LINC00557-201ENST00000563184 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.7
LINC00557-201ENST00000563184 RAB15P59190 212 aa10.64□□□□□ -0.71
LINC00557-201ENST00000563184 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
LINC00557-201ENST00000563184 LZTS3O60299 673 aaPredicted RBP10.63□□□□□ -0.71
LINC00557-201ENST00000563184 ATG7O95352 703 aa10.63□□□□□ -0.71
LINC00557-201ENST00000563184 FSHRP23945 695 aa10.63□□□□□ -0.71
LINC00557-201ENST00000563184 FOXC1Q12948 553 aa10.63□□□□□ -0.71
LINC00557-201ENST00000563184 VRTNQ9H8Y1 702 aa10.63□□□□□ -0.71
LINC00557-201ENST00000563184 ERVH48-1M5A8F1 160 aa10.62□□□□□ -0.71
LINC00557-201ENST00000563184 EML3Q32P44 896 aa10.62□□□□□ -0.71
LINC00557-201ENST00000563184 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
LINC00557-201ENST00000563184 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
LINC00557-201ENST00000563184 MKRN1Q9UHC7 482 aaKnown RBP10.62□□□□□ -0.71
LINC00557-201ENST00000563184 PCDHB11Q9Y5F2 797 aa10.62□□□□□ -0.71
LINC00557-201ENST00000563184 ADH1CP00326 375 aa10.61□□□□□ -0.71
LINC00557-201ENST00000563184 CRTC2Q53ET0 693 aaPredicted RBP10.6□□□□□ -0.71
LINC00557-201ENST00000563184 CCDC125Q86Z20 511 aa10.6□□□□□ -0.71
LINC00557-201ENST00000563184 CYP4X1Q8N118 509 aa10.6□□□□□ -0.71
LINC00557-201ENST00000563184 ACIN1Q9UKV3 1341 aaKnown RBP10.59□□□□□ -0.71
LINC00557-201ENST00000563184 FAM187AA6NFU0 413 aa10.59□□□□□ -0.71
LINC00557-201ENST00000563184 NR3C2P08235 984 aa10.59□□□□□ -0.71
LINC00557-201ENST00000563184 SCTRP47872 440 aa10.59□□□□□ -0.71
LINC00557-201ENST00000563184 TMPRSS4Q9NRS4 437 aa10.59□□□□□ -0.71
LINC00557-201ENST00000563184 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
LINC00557-201ENST00000563184 CLDN10P78369 228 aa10.58□□□□□ -0.72
LINC00557-201ENST00000563184 NR5A1Q13285 461 aa10.58□□□□□ -0.72
LINC00557-201ENST00000563184 ZMIZ1Q9ULJ6 1067 aa10.58□□□□□ -0.72
LINC00557-201ENST00000563184 NOD1Q9Y239 953 aa10.58□□□□□ -0.72
LINC00557-201ENST00000563184 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L15C9J2P7 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L10C9JJH3 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L13C9JLJ4 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L12C9JPN9 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L11C9JVI0 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L21D6R901 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L18D6R9N7 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L22D6RA61 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L17D6RBQ6 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L19D6RCP7 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L20D6RJB6 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 ALDH1A1P00352 501 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms